RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
PBX1-212ENST00000540236 TAF3Q5VWG9 929 aa13.62□□□□□ -0.23
PBX1-212ENST00000540236 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
PBX1-212ENST00000540236 TSPY26PQ9H489 355 aa13.62□□□□□ -0.23
PBX1-212ENST00000540236 LNPKQ9C0E8 428 aa13.61□□□□□ -0.23
PBX1-212ENST00000540236 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
PBX1-212ENST00000540236 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
PBX1-212ENST00000540236 POLR3GO15318 223 aaPredicted RBP13.61□□□□□ -0.23
PBX1-212ENST00000540236 GTPBP4Q9BZE4 634 aaKnown RBP13.61□□□□□ -0.23
PBX1-212ENST00000540236 PANK3Q9H999 370 aa13.61□□□□□ -0.23
PBX1-212ENST00000540236 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
PBX1-212ENST00000540236 APAF1O14727 1248 aa13.6□□□□□ -0.23
PBX1-212ENST00000540236 TTLL5Q6EMB2 1281 aa13.6□□□□□ -0.23
PBX1-212ENST00000540236 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
PBX1-212ENST00000540236 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.59□□□□□ -0.23
PBX1-212ENST00000540236 V9GYY5 206 aaPredicted RBP13.59□□□□□ -0.23
PBX1-212ENST00000540236 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
PBX1-212ENST00000540236 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.23
PBX1-212ENST00000540236 USP47Q96K76 1375 aa13.58□□□□□ -0.24
PBX1-212ENST00000540236 GTF2A1P52655 376 aaPredicted RBP13.58□□□□□ -0.24
PBX1-212ENST00000540236 TIGD1Q96MW7 591 aa13.58□□□□□ -0.24
PBX1-212ENST00000540236 RIPK4P57078 832 aa13.58□□□□□ -0.24
PBX1-212ENST00000540236 GAS2L3Q86XJ1 694 aa13.58□□□□□ -0.24
PBX1-212ENST00000540236 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.24
PBX1-212ENST00000540236 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
PBX1-212ENST00000540236 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
PBX1-212ENST00000540236 SMC4Q9NTJ3 1288 aa13.57□□□□□ -0.24
PBX1-212ENST00000540236 ZSCAN23Q3MJ62 389 aa13.57□□□□□ -0.24
PBX1-212ENST00000540236 DIAPH3Q9NSV4 1193 aa13.57□□□□□ -0.24
PBX1-212ENST00000540236 TEX35Q5T0J7 233 aa13.56□□□□□ -0.24
PBX1-212ENST00000540236 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
PBX1-212ENST00000540236 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
PBX1-212ENST00000540236 SRRTQ9BXP5 876 aaKnown RBP13.56□□□□□ -0.24
PBX1-212ENST00000540236 ROCK2O75116 1388 aaKnown RBP13.55□□□□□ -0.24
PBX1-212ENST00000540236 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
PBX1-212ENST00000540236 PRIM1P49642 420 aaKnown RBP13.54□□□□□ -0.24
PBX1-212ENST00000540236 NBPF1Q3BBV0 1214 aa13.54□□□□□ -0.24
PBX1-212ENST00000540236 ZRSR1Q15695 479 aaKnown RBP13.53□□□□□ -0.24
PBX1-212ENST00000540236 TTC12Q9H892 705 aaPredicted RBP13.53□□□□□ -0.24
PBX1-212ENST00000540236 KIF16BQ96L93 1317 aa13.53□□□□□ -0.24
PBX1-212ENST00000540236 CHGAP10645 457 aaKnown RBP13.53□□□□□ -0.24
PBX1-212ENST00000540236 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
PBX1-212ENST00000540236 C16orf45Q96MC5 204 aaPredicted RBP13.53□□□□□ -0.24
PBX1-212ENST00000540236 C1orf115Q9H7X2 142 aa13.53□□□□□ -0.24
PBX1-212ENST00000540236 PHF14O94880 888 aa13.52□□□□□ -0.24
PBX1-212ENST00000540236 RRBP1Q9P2E9 1410 aaKnown RBP13.52□□□□□ -0.24
PBX1-212ENST00000540236 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
PBX1-212ENST00000540236 PKD2Q13563 968 aa13.52□□□□□ -0.25
PBX1-212ENST00000540236 ATP2B3Q16720 1220 aa13.51□□□□□ -0.25
PBX1-212ENST00000540236 GDPD2Q9HCC8 539 aa13.51□□□□□ -0.25
PBX1-212ENST00000540236 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
PBX1-212ENST00000540236 C10orf67Q8IYJ2 551 aa13.51□□□□□ -0.25
PBX1-212ENST00000540236 SECISBP2LQ93073 1101 aaKnown RBP13.5□□□□□ -0.25
PBX1-212ENST00000540236 K7ELQ4 463 aaPredicted RBP13.5□□□□□ -0.25
PBX1-212ENST00000540236 ST18O60284 1047 aa13.49□□□□□ -0.25
PBX1-212ENST00000540236 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
PBX1-212ENST00000540236 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
PBX1-212ENST00000540236 FMN1Q68DA7 1419 aa13.48□□□□□ -0.25
PBX1-212ENST00000540236 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
PBX1-212ENST00000540236 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
PBX1-212ENST00000540236 TBC1D32Q96NH3 1257 aa13.48□□□□□ -0.25
PBX1-212ENST00000540236 ZKSCAN5Q9Y2L8 839 aa13.48□□□□□ -0.25
PBX1-212ENST00000540236 CCDC112Q8NEF3 446 aa13.48□□□□□ -0.25
PBX1-212ENST00000540236 DRC1Q96MC2 740 aa13.48□□□□□ -0.25
PBX1-212ENST00000540236 CALCOCO1Q9P1Z2 691 aa13.47□□□□□ -0.25
PBX1-212ENST00000540236 SETQ01105 290 aaPredicted RBP13.47□□□□□ -0.25
PBX1-212ENST00000540236 NOM1Q5C9Z4 860 aaKnown RBP13.47□□□□□ -0.25
PBX1-212ENST00000540236 FOSBP53539 338 aa13.47□□□□□ -0.25
PBX1-212ENST00000540236 CGNL1Q0VF96 1302 aa13.47□□□□□ -0.25
PBX1-212ENST00000540236 TMF1P82094 1093 aa13.47□□□□□ -0.25
PBX1-212ENST00000540236 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
PBX1-212ENST00000540236 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.26
PBX1-212ENST00000540236 ADCY5O95622 1261 aa13.46□□□□□ -0.26
PBX1-212ENST00000540236 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.26
PBX1-212ENST00000540236 ARAP1Q96P48 1450 aa13.46□□□□□ -0.26
PBX1-212ENST00000540236 FSD2A1L4K1 749 aa13.45□□□□□ -0.26
PBX1-212ENST00000540236 GTF3C6Q969F1 213 aa13.45□□□□□ -0.26
PBX1-212ENST00000540236 KIF20AO95235 890 aa13.45□□□□□ -0.26
PBX1-212ENST00000540236 TNNQ9UQP3 1299 aa13.45□□□□□ -0.26
PBX1-212ENST00000540236 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
PBX1-212ENST00000540236 BAG4O95429 457 aaKnown RBP13.45□□□□□ -0.26
PBX1-212ENST00000540236 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
PBX1-212ENST00000540236 FAM177A1Q8N128 213 aaPredicted RBP13.45□□□□□ -0.26
PBX1-212ENST00000540236 NUCB2P80303 420 aa13.44□□□□□ -0.26
PBX1-212ENST00000540236 CAMK4Q16566 473 aa13.44□□□□□ -0.26
PBX1-212ENST00000540236 TRMT1Q9NXH9 659 aaKnown RBP13.44□□□□□ -0.26
PBX1-212ENST00000540236 HDAC5Q9UQL6 1122 aa13.44□□□□□ -0.26
PBX1-212ENST00000540236 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
PBX1-212ENST00000540236 BCL2L12Q9HB09 334 aa13.44□□□□□ -0.26
PBX1-212ENST00000540236 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
PBX1-212ENST00000540236 TRIM5Q9C035 493 aa13.43□□□□□ -0.26
PBX1-212ENST00000540236 UTP14CQ5TAP6 766 aaKnown RBP13.43□□□□□ -0.26
PBX1-212ENST00000540236 ISY1Q9ULR0 285 aaKnown RBP13.43□□□□□ -0.26
PBX1-212ENST00000540236 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
PBX1-212ENST00000540236 LMOD3Q0VAK6 560 aa13.43□□□□□ -0.26
PBX1-212ENST00000540236 BRD4O60885 1362 aaPredicted RBP13.43□□□□□ -0.26
PBX1-212ENST00000540236 SOX12O15370 315 aa13.42□□□□□ -0.26
PBX1-212ENST00000540236 CWC15Q9P013 229 aaKnown RBP13.42□□□□□ -0.26
PBX1-212ENST00000540236 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
PBX1-212ENST00000540236 RILPL2Q969X0 211 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms