RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FBXO31Q5XUX0 539 aaPredicted RBP10.46□□□□□ -0.73
LPCAT3-209ENST00000540060 TRPM2O94759 1503 aa10.46□□□□□ -0.74
LPCAT3-209ENST00000540060 CLTCL1P53675 1640 aa10.45□□□□□ -0.74
LPCAT3-209ENST00000540060 UGGT1Q9NYU2 1555 aa10.45□□□□□ -0.74
LPCAT3-209ENST00000540060 ADGRB3O60242 1522 aa10.45□□□□□ -0.74
LPCAT3-209ENST00000540060 POTEGQ6S5H5 508 aa10.44□□□□□ -0.74
LPCAT3-209ENST00000540060 KIF1BO60333 1816 aa10.44□□□□□ -0.74
LPCAT3-209ENST00000540060 TMEM131LA2VDJ0 1609 aa10.44□□□□□ -0.74
LPCAT3-209ENST00000540060 PLA2R1Q13018 1463 aa10.42□□□□□ -0.74
LPCAT3-209ENST00000540060 PTPRTO14522 1441 aa10.42□□□□□ -0.74
LPCAT3-209ENST00000540060 TRIM26Q12899 539 aaPredicted RBP10.42□□□□□ -0.74
LPCAT3-209ENST00000540060 ACIN1Q9UKV3 1341 aaKnown RBP10.41□□□□□ -0.74
LPCAT3-209ENST00000540060 NEURL4Q96JN8 1562 aa10.41□□□□□ -0.74
LPCAT3-209ENST00000540060 TRIM52Q96A61 297 aa10.41□□□□□ -0.74
LPCAT3-209ENST00000540060 SLIT1O75093 1534 aa10.4□□□□□ -0.74
LPCAT3-209ENST00000540060 ARHGAP23Q9P227 1491 aa10.39□□□□□ -0.75
LPCAT3-209ENST00000540060 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
LPCAT3-209ENST00000540060 HRCP23327 699 aa10.39□□□□□ -0.75
LPCAT3-209ENST00000540060 HSPA2P54652 639 aa10.39□□□□□ -0.75
LPCAT3-209ENST00000540060 SLC4A1APQ9BWU0 796 aaKnown RBP10.39□□□□□ -0.75
LPCAT3-209ENST00000540060 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
LPCAT3-209ENST00000540060 IQGAP1P46940 1657 aa10.38□□□□□ -0.75
LPCAT3-209ENST00000540060 PKD2Q13563 968 aa10.38□□□□□ -0.75
LPCAT3-209ENST00000540060 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
LPCAT3-209ENST00000540060 PPLO60437 1756 aa10.37□□□□□ -0.75
LPCAT3-209ENST00000540060 SLC52A1Q9NWF4 448 aa10.36□□□□□ -0.75
LPCAT3-209ENST00000540060 IDI1Q13907 227 aa10.35□□□□□ -0.75
LPCAT3-209ENST00000540060 MED14O60244 1454 aa10.35□□□□□ -0.75
LPCAT3-209ENST00000540060 ZFYVE9O95405 1425 aa10.34□□□□□ -0.75
LPCAT3-209ENST00000540060 NEXMIFQ5QGS0 1516 aa10.34□□□□□ -0.75
LPCAT3-209ENST00000540060 SCAF11Q99590 1463 aaKnown RBP10.34□□□□□ -0.75
LPCAT3-209ENST00000540060 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
LPCAT3-209ENST00000540060 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
LPCAT3-209ENST00000540060 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
LPCAT3-209ENST00000540060 TMEM2Q9UHN6 1383 aa10.33□□□□□ -0.76
LPCAT3-209ENST00000540060 KCNA4P22459 653 aa10.32□□□□□ -0.76
LPCAT3-209ENST00000540060 NRXN3Q9Y4C0 1643 aa10.32□□□□□ -0.76
LPCAT3-209ENST00000540060 ANKRD30BQ9BXX2 1392 aa10.31□□□□□ -0.76
LPCAT3-209ENST00000540060 SPATA31E1Q6ZUB1 1445 aa10.31□□□□□ -0.76
LPCAT3-209ENST00000540060 RIMS2Q9UQ26 1411 aa10.31□□□□□ -0.76
LPCAT3-209ENST00000540060 SETD1AO15047 1707 aaKnown RBP10.3□□□□□ -0.76
LPCAT3-209ENST00000540060 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
LPCAT3-209ENST00000540060 NPHP4O75161 1426 aaPredicted RBP10.3□□□□□ -0.76
LPCAT3-209ENST00000540060 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
LPCAT3-209ENST00000540060 STRCP1A6NGW2 1772 aa10.29□□□□□ -0.76
LPCAT3-209ENST00000540060 DHX57Q6P158 1386 aaKnown RBP10.29□□□□□ -0.76
LPCAT3-209ENST00000540060 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
LPCAT3-209ENST00000540060 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
LPCAT3-209ENST00000540060 SETBP1Q9Y6X0 1596 aa10.29□□□□□ -0.76
LPCAT3-209ENST00000540060 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
LPCAT3-209ENST00000540060 CHGAP10645 457 aaKnown RBP10.27□□□□□ -0.77
LPCAT3-209ENST00000540060 LTKP29376 864 aa10.27□□□□□ -0.77
LPCAT3-209ENST00000540060 ANKLE2Q86XL3 938 aa10.27□□□□□ -0.77
LPCAT3-209ENST00000540060 PCGF6Q9BYE7 350 aa10.27□□□□□ -0.77
LPCAT3-209ENST00000540060 PLEKHG1Q9ULL1 1385 aa10.26□□□□□ -0.77
LPCAT3-209ENST00000540060 CHD2O14647 1828 aaKnown RBP10.26□□□□□ -0.77
LPCAT3-209ENST00000540060 NWD1Q149M9 1564 aa10.26□□□□□ -0.77
LPCAT3-209ENST00000540060 LAMC1P11047 1609 aa10.25□□□□□ -0.77
LPCAT3-209ENST00000540060 LTBP4Q8N2S1 1624 aa10.25□□□□□ -0.77
LPCAT3-209ENST00000540060 MYOM2P54296 1465 aa10.25□□□□□ -0.77
LPCAT3-209ENST00000540060 TXNDC2Q86VQ3 553 aa10.25□□□□□ -0.77
LPCAT3-209ENST00000540060 EID1Q9Y6B2 187 aa10.25□□□□□ -0.77
LPCAT3-209ENST00000540060 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
LPCAT3-209ENST00000540060 ADAMTS13Q76LX8 1427 aa10.24□□□□□ -0.77
LPCAT3-209ENST00000540060 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
LPCAT3-209ENST00000540060 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
LPCAT3-209ENST00000540060 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.23□□□□□ -0.77
LPCAT3-209ENST00000540060 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
LPCAT3-209ENST00000540060 RPGRIP1LQ68CZ1 1315 aa10.22□□□□□ -0.77
LPCAT3-209ENST00000540060 ALKQ9UM73 1620 aa10.22□□□□□ -0.77
LPCAT3-209ENST00000540060 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
LPCAT3-209ENST00000540060 POLA2Q14181 598 aa10.21□□□□□ -0.77
LPCAT3-209ENST00000540060 NUTM2DQ5VT03 806 aaPredicted RBP10.21□□□□□ -0.77
LPCAT3-209ENST00000540060 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
LPCAT3-209ENST00000540060 CPS1P31327 1500 aa10.21□□□□□ -0.78
LPCAT3-209ENST00000540060 KNDC1Q76NI1 1749 aa10.21□□□□□ -0.78
LPCAT3-209ENST00000540060 HDGFP51858 240 aaKnown RBP10.2□□□□□ -0.78
LPCAT3-209ENST00000540060 ASXL1Q8IXJ9 1541 aa10.2□□□□□ -0.78
LPCAT3-209ENST00000540060 KIAA1210Q9ULL0 1709 aa10.2□□□□□ -0.78
LPCAT3-209ENST00000540060 NKTRP30414 1462 aaKnown RBP10.19□□□□□ -0.78
LPCAT3-209ENST00000540060 ZNF335Q9H4Z2 1342 aaPredicted RBP10.19□□□□□ -0.78
LPCAT3-209ENST00000540060 RGL3Q3MIN7 710 aa10.18□□□□□ -0.78
LPCAT3-209ENST00000540060 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
LPCAT3-209ENST00000540060 IQSEC2Q5JU85 1478 aa10.17□□□□□ -0.78
LPCAT3-209ENST00000540060 PIK3R4Q99570 1358 aa10.17□□□□□ -0.78
LPCAT3-209ENST00000540060 ADGRF5Q8IZF2 1346 aa10.17□□□□□ -0.78
LPCAT3-209ENST00000540060 VGFO15240 615 aaPredicted RBP10.17□□□□□ -0.78
LPCAT3-209ENST00000540060 SLC26A8Q96RN1 970 aa10.17□□□□□ -0.78
LPCAT3-209ENST00000540060 TRPM1Q7Z4N2 1603 aa10.17□□□□□ -0.78
LPCAT3-209ENST00000540060 LRRC7Q96NW7 1537 aa10.17□□□□□ -0.78
LPCAT3-209ENST00000540060 NALCNQ8IZF0 1738 aa10.16□□□□□ -0.78
LPCAT3-209ENST00000540060 PRAG1Q86YV5 1406 aa10.16□□□□□ -0.78
LPCAT3-209ENST00000540060 PTPRUQ92729 1446 aa10.16□□□□□ -0.78
LPCAT3-209ENST00000540060 ADGRB1O14514 1584 aa10.15□□□□□ -0.78
LPCAT3-209ENST00000540060 BCANQ96GW7 911 aa10.15□□□□□ -0.78
LPCAT3-209ENST00000540060 SIN3AQ96ST3 1273 aa10.15□□□□□ -0.78
LPCAT3-209ENST00000540060 TBX22Q9Y458 520 aa10.15□□□□□ -0.78
LPCAT3-209ENST00000540060 METP08581 1390 aa10.14□□□□□ -0.79
LPCAT3-209ENST00000540060 ARHGEF28Q8N1W1 1705 aaKnown RBP10.14□□□□□ -0.79
LPCAT3-209ENST00000540060 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms