RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MYO5BQ9ULV0 1848 aa22.24■■□□□ 1.15
DDB1-216ENST00000539739 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
DDB1-216ENST00000539739 RIMS2Q9UQ26 1411 aa22.23■■□□□ 1.15
DDB1-216ENST00000539739 HSPA2P54652 639 aa22.22■■□□□ 1.15
DDB1-216ENST00000539739 ANKLE2Q86XL3 938 aa22.22■■□□□ 1.15
DDB1-216ENST00000539739 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
DDB1-216ENST00000539739 STAC3Q96MF2 364 aa22.22■■□□□ 1.15
DDB1-216ENST00000539739 VGFO15240 615 aaPredicted RBP22.21■■□□□ 1.15
DDB1-216ENST00000539739 PPP1R15AO75807 674 aaPredicted RBP22.21■■□□□ 1.15
DDB1-216ENST00000539739 TXNDC2Q86VQ3 553 aa22.21■■□□□ 1.15
DDB1-216ENST00000539739 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
DDB1-216ENST00000539739 SLIT1O75093 1534 aa22.21■■□□□ 1.15
DDB1-216ENST00000539739 ARHGAP23Q9P227 1491 aa22.21■■□□□ 1.15
DDB1-216ENST00000539739 ZFYVE9O95405 1425 aa22.19■■□□□ 1.14
DDB1-216ENST00000539739 KDM2AQ9Y2K7 1162 aa22.19■■□□□ 1.14
DDB1-216ENST00000539739 NUTM2DQ5VT03 806 aaPredicted RBP22.18■■□□□ 1.14
DDB1-216ENST00000539739 NEXMIFQ5QGS0 1516 aa22.18■■□□□ 1.14
DDB1-216ENST00000539739 LTKP29376 864 aa22.17■■□□□ 1.14
DDB1-216ENST00000539739 SCAF11Q99590 1463 aaKnown RBP22.16■■□□□ 1.14
DDB1-216ENST00000539739 PPLO60437 1756 aa22.14■■□□□ 1.13
DDB1-216ENST00000539739 BCANQ96GW7 911 aa22.13■■□□□ 1.13
DDB1-216ENST00000539739 MYOM2P54296 1465 aa22.12■■□□□ 1.13
DDB1-216ENST00000539739 NCKAP5LQ9HCH0 1330 aa22.12■■□□□ 1.13
DDB1-216ENST00000539739 ADGRF5Q8IZF2 1346 aa22.11■■□□□ 1.13
DDB1-216ENST00000539739 IFT172Q9UG01 1749 aa22.11■■□□□ 1.13
DDB1-216ENST00000539739 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
DDB1-216ENST00000539739 SENP3Q9H4L4 574 aaPredicted RBP22.07■■□□□ 1.12
DDB1-216ENST00000539739 POLR1AO95602 1720 aaPredicted RBP22.07■■□□□ 1.12
DDB1-216ENST00000539739 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
DDB1-216ENST00000539739 MED14O60244 1454 aa22.06■■□□□ 1.12
DDB1-216ENST00000539739 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
DDB1-216ENST00000539739 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
DDB1-216ENST00000539739 DMRT2Q9Y5R5 561 aa22.05■■□□□ 1.12
DDB1-216ENST00000539739 PIK3C2GO75747 1445 aa22.04■■□□□ 1.12
DDB1-216ENST00000539739 PRAG1Q86YV5 1406 aa22.04■■□□□ 1.12
DDB1-216ENST00000539739 SETBP1Q9Y6X0 1596 aa22.01■■□□□ 1.11
DDB1-216ENST00000539739 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
DDB1-216ENST00000539739 SLC26A8Q96RN1 970 aa22.01■■□□□ 1.11
DDB1-216ENST00000539739 C14orf93Q9H972 538 aaKnown RBP22.01■■□□□ 1.11
DDB1-216ENST00000539739 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
DDB1-216ENST00000539739 CFAP70Q5T0N1 1121 aa22■■□□□ 1.11
DDB1-216ENST00000539739 TBX22Q9Y458 520 aa22■■□□□ 1.11
DDB1-216ENST00000539739 IQGAP1P46940 1657 aa22■■□□□ 1.11
DDB1-216ENST00000539739 ADAMTS13Q76LX8 1427 aa21.98■■□□□ 1.11
DDB1-216ENST00000539739 ALKQ9UM73 1620 aa21.97■■□□□ 1.11
DDB1-216ENST00000539739 DIP2AQ14689 1571 aa21.96■■□□□ 1.11
DDB1-216ENST00000539739 NRXN3Q9Y4C0 1643 aa21.96■■□□□ 1.11
DDB1-216ENST00000539739 LAMC1P11047 1609 aa21.95■■□□□ 1.1
DDB1-216ENST00000539739 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
DDB1-216ENST00000539739 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
DDB1-216ENST00000539739 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
DDB1-216ENST00000539739 TMEM132EQ6IEE7 984 aa21.91■■□□□ 1.1
DDB1-216ENST00000539739 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
DDB1-216ENST00000539739 METP08581 1390 aa21.91■■□□□ 1.1
DDB1-216ENST00000539739 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
DDB1-216ENST00000539739 TRPM1Q7Z4N2 1603 aa21.9■■□□□ 1.1
DDB1-216ENST00000539739 SETD1AO15047 1707 aaKnown RBP21.88■■□□□ 1.09
DDB1-216ENST00000539739 CARD11Q9BXL7 1154 aa21.88■■□□□ 1.09
DDB1-216ENST00000539739 KCNA6P17658 529 aa21.86■■□□□ 1.09
DDB1-216ENST00000539739 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
DDB1-216ENST00000539739 ADGRB1O14514 1584 aa21.86■■□□□ 1.09
DDB1-216ENST00000539739 GPRASP1Q5JY77 1395 aa21.86■■□□□ 1.09
DDB1-216ENST00000539739 YTHDC2Q9H6S0 1430 aaKnown RBP21.85■■□□□ 1.09
DDB1-216ENST00000539739 STK26Q9P289 416 aa21.85■■□□□ 1.09
DDB1-216ENST00000539739 LRPPRCP42704 1394 aaKnown RBP21.85■■□□□ 1.09
DDB1-216ENST00000539739 ASXL1Q8IXJ9 1541 aa21.84■■□□□ 1.09
DDB1-216ENST00000539739 ABCC11Q96J66 1382 aa21.83■■□□□ 1.08
DDB1-216ENST00000539739 PTPRUQ92729 1446 aa21.83■■□□□ 1.08
DDB1-216ENST00000539739 TRAK1Q9UPV9 953 aa21.82■■□□□ 1.08
DDB1-216ENST00000539739 CHD2O14647 1828 aaKnown RBP21.8■■□□□ 1.08
DDB1-216ENST00000539739 ZNF335Q9H4Z2 1342 aaPredicted RBP21.8■■□□□ 1.08
DDB1-216ENST00000539739 SIRT1Q96EB6 747 aa21.78■■□□□ 1.08
DDB1-216ENST00000539739 TECPR2O15040 1411 aa21.78■■□□□ 1.08
DDB1-216ENST00000539739 EIF3AQ14152 1382 aaKnown RBP21.78■■□□□ 1.08
DDB1-216ENST00000539739 NWD1Q149M9 1564 aa21.77■■□□□ 1.08
DDB1-216ENST00000539739 POGKQ9P215 609 aa21.76■■□□□ 1.07
DDB1-216ENST00000539739 PTCH1Q13635 1447 aa21.76■■□□□ 1.07
DDB1-216ENST00000539739 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
DDB1-216ENST00000539739 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
DDB1-216ENST00000539739 PROSER2Q86WR7 435 aaPredicted RBP21.75■■□□□ 1.07
DDB1-216ENST00000539739 DLC1Q96QB1 1528 aa21.75■■□□□ 1.07
DDB1-216ENST00000539739 FAM135BQ49AJ0 1406 aa21.74■■□□□ 1.07
DDB1-216ENST00000539739 ROBO2Q9HCK4 1378 aa21.74■■□□□ 1.07
DDB1-216ENST00000539739 KNDC1Q76NI1 1749 aa21.74■■□□□ 1.07
DDB1-216ENST00000539739 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
DDB1-216ENST00000539739 PRAM1Q96QH2 718 aa21.73■■□□□ 1.07
DDB1-216ENST00000539739 CPS1P31327 1500 aa21.73■■□□□ 1.07
DDB1-216ENST00000539739 USP47Q96K76 1375 aa21.73■■□□□ 1.07
DDB1-216ENST00000539739 WAPLQ7Z5K2 1190 aa21.72■■□□□ 1.07
DDB1-216ENST00000539739 CENPJQ9HC77 1338 aaPredicted RBP21.71■■□□□ 1.07
DDB1-216ENST00000539739 STRCP1A6NGW2 1772 aa21.7■■□□□ 1.06
DDB1-216ENST00000539739 SAFB2Q14151 953 aaKnown RBP eCLIP21.69■■□□□ 1.06
DDB1-216ENST00000539739 ARHGEF28Q8N1W1 1705 aaKnown RBP21.68■■□□□ 1.06
DDB1-216ENST00000539739 ST20-MTHFSA0A0A6YYL1 179 aa21.68■■□□□ 1.06
DDB1-216ENST00000539739 PLEKHH1Q9ULM0 1364 aa21.67■■□□□ 1.06
DDB1-216ENST00000539739 C14orf37Q86TY3 774 aa21.67■■□□□ 1.06
DDB1-216ENST00000539739 TMEM94Q12767 1356 aa21.67■■□□□ 1.06
DDB1-216ENST00000539739 HSPA5P11021 654 aaKnown RBP21.66■■□□□ 1.06
DDB1-216ENST00000539739 NCOA3Q9Y6Q9 1424 aa21.66■■□□□ 1.06
DDB1-216ENST00000539739 RBM33Q96EV2 1170 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms