RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 KIAA1210Q9ULL0 1709 aa24.81■■□□□ 1.56
SLC38A10-203ENST00000539643 ARHGEF40Q8TER5 1519 aa24.8■■□□□ 1.56
SLC38A10-203ENST00000539643 PPP6R1Q9UPN7 881 aa24.8■■□□□ 1.56
SLC38A10-203ENST00000539643 MROH2AA6NES4 1674 aa24.79■■□□□ 1.56
SLC38A10-203ENST00000539643 SIGLEC1Q9BZZ2 1709 aa24.77■■□□□ 1.56
SLC38A10-203ENST00000539643 IQGAP1P46940 1657 aa24.77■■□□□ 1.56
SLC38A10-203ENST00000539643 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
SLC38A10-203ENST00000539643 FAM9BQ8IZU0 186 aa24.76■■□□□ 1.55
SLC38A10-203ENST00000539643 NRXN1Q9ULB1 1477 aa24.76■■□□□ 1.55
SLC38A10-203ENST00000539643 TESK2Q96S53 571 aa24.76■■□□□ 1.55
SLC38A10-203ENST00000539643 BCANQ96GW7 911 aa24.75■■□□□ 1.55
SLC38A10-203ENST00000539643 PIK3C2BO00750 1634 aa24.75■■□□□ 1.55
SLC38A10-203ENST00000539643 SYNMO15061 1565 aa24.72■■□□□ 1.55
SLC38A10-203ENST00000539643 SCAF11Q99590 1463 aaKnown RBP24.72■■□□□ 1.55
SLC38A10-203ENST00000539643 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
SLC38A10-203ENST00000539643 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
SLC38A10-203ENST00000539643 ADGRF5Q8IZF2 1346 aa24.68■■□□□ 1.54
SLC38A10-203ENST00000539643 PPLO60437 1756 aa24.67■■□□□ 1.54
SLC38A10-203ENST00000539643 MLECQ14165 292 aa24.67■■□□□ 1.54
SLC38A10-203ENST00000539643 SLC52A1Q9NWF4 448 aa24.67■■□□□ 1.54
SLC38A10-203ENST00000539643 PREX1Q8TCU6 1659 aa24.66■■□□□ 1.54
SLC38A10-203ENST00000539643 DISP3Q9P2K9 1392 aa24.66■■□□□ 1.54
SLC38A10-203ENST00000539643 ZBED9Q6R2W3 1325 aa24.66■■□□□ 1.54
SLC38A10-203ENST00000539643 CNGB1Q14028 1251 aaPredicted RBP24.66■■□□□ 1.54
SLC38A10-203ENST00000539643 IDI1Q13907 227 aa24.65■■□□□ 1.54
SLC38A10-203ENST00000539643 TMF1P82094 1093 aa24.64■■□□□ 1.54
SLC38A10-203ENST00000539643 CLTCQ00610 1675 aaKnown RBP24.64■■□□□ 1.53
SLC38A10-203ENST00000539643 FBXO31Q5XUX0 539 aaPredicted RBP24.63■■□□□ 1.53
SLC38A10-203ENST00000539643 PIK3C2GO75747 1445 aa24.62■■□□□ 1.53
SLC38A10-203ENST00000539643 CFAP70Q5T0N1 1121 aa24.62■■□□□ 1.53
SLC38A10-203ENST00000539643 EIF3AQ14152 1382 aaKnown RBP24.62■■□□□ 1.53
SLC38A10-203ENST00000539643 SETBP1Q9Y6X0 1596 aa24.61■■□□□ 1.53
SLC38A10-203ENST00000539643 ERVK-7P63135 1459 aa24.6■■□□□ 1.53
SLC38A10-203ENST00000539643 KTN1Q86UP2 1357 aaKnown RBP24.59■■□□□ 1.53
SLC38A10-203ENST00000539643 ESF1Q9H501 851 aaKnown RBP24.58■■□□□ 1.52
SLC38A10-203ENST00000539643 NEXMIFQ5QGS0 1516 aa24.57■■□□□ 1.52
SLC38A10-203ENST00000539643 C14orf93Q9H972 538 aaKnown RBP24.55■■□□□ 1.52
SLC38A10-203ENST00000539643 PER1O15534 1290 aaPredicted RBP24.54■■□□□ 1.52
SLC38A10-203ENST00000539643 RALBP1Q15311 655 aa24.54■■□□□ 1.52
SLC38A10-203ENST00000539643 ZFYVE9O95405 1425 aa24.54■■□□□ 1.52
SLC38A10-203ENST00000539643 MYO3AQ8NEV4 1616 aa24.54■■□□□ 1.52
SLC38A10-203ENST00000539643 SLC24A1O60721 1099 aa24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 TSHZ2Q9NRE2 1034 aa24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 ZMYM3Q14202 1370 aa24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 ADGRB1O14514 1584 aa24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 SPATA31D1Q6ZQQ2 1576 aa24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 VGFO15240 615 aaPredicted RBP24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 TMC1Q8TDI8 760 aa24.53■■□□□ 1.52
SLC38A10-203ENST00000539643 MYBBP1AQ9BQG0 1328 aaKnown RBP24.52■■□□□ 1.52
SLC38A10-203ENST00000539643 CDCA8Q53HL2 280 aa24.52■■□□□ 1.52
SLC38A10-203ENST00000539643 BRD4O60885 1362 aaPredicted RBP24.5■■□□□ 1.51
SLC38A10-203ENST00000539643 PNISRQ8TF01 805 aaKnown RBP24.5■■□□□ 1.51
SLC38A10-203ENST00000539643 SBNO2Q9Y2G9 1366 aa24.5■■□□□ 1.51
SLC38A10-203ENST00000539643 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
SLC38A10-203ENST00000539643 IRX6P78412 446 aaPredicted RBP24.46■■□□□ 1.51
SLC38A10-203ENST00000539643 PARD3Q8TEW0 1356 aa24.46■■□□□ 1.51
SLC38A10-203ENST00000539643 NUTM2DQ5VT03 806 aaPredicted RBP24.45■■□□□ 1.51
SLC38A10-203ENST00000539643 PANK3Q9H999 370 aa24.45■■□□□ 1.5
SLC38A10-203ENST00000539643 STAG3Q9UJ98 1225 aa24.45■■□□□ 1.5
SLC38A10-203ENST00000539643 ERICH6BQ5W0A0 696 aa24.43■■□□□ 1.5
SLC38A10-203ENST00000539643 LRPPRCP42704 1394 aaKnown RBP24.43■■□□□ 1.5
SLC38A10-203ENST00000539643 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
SLC38A10-203ENST00000539643 SMG6Q86US8 1419 aaKnown RBP24.42■■□□□ 1.5
SLC38A10-203ENST00000539643 MYOM1P52179 1685 aa24.42■■□□□ 1.5
SLC38A10-203ENST00000539643 NLRP13Q86W25 1043 aa24.4■■□□□ 1.5
SLC38A10-203ENST00000539643 CENPJQ9HC77 1338 aaPredicted RBP24.39■■□□□ 1.5
SLC38A10-203ENST00000539643 A2ML1A8K2U0 1454 aa24.39■■□□□ 1.49
SLC38A10-203ENST00000539643 TMEM132EQ6IEE7 984 aa24.37■■□□□ 1.49
SLC38A10-203ENST00000539643 TNRQ92752 1358 aa24.36■■□□□ 1.49
SLC38A10-203ENST00000539643 NUDCQ9Y266 331 aa24.36■■□□□ 1.49
SLC38A10-203ENST00000539643 TRAK1Q9UPV9 953 aa24.35■■□□□ 1.49
SLC38A10-203ENST00000539643 QRICH2Q9H0J4 1663 aa24.35■■□□□ 1.49
SLC38A10-203ENST00000539643 ASXL1Q8IXJ9 1541 aa24.33■■□□□ 1.49
SLC38A10-203ENST00000539643 ARHGEF28Q8N1W1 1705 aaKnown RBP24.33■■□□□ 1.49
SLC38A10-203ENST00000539643 CC2D1BQ5T0F9 858 aaKnown RBP24.32■■□□□ 1.48
SLC38A10-203ENST00000539643 PPP4R2Q9NY27 417 aa24.31■■□□□ 1.48
SLC38A10-203ENST00000539643 NPC1L1Q9UHC9 1359 aa24.31■■□□□ 1.48
SLC38A10-203ENST00000539643 RIMS2Q9UQ26 1411 aa24.3■■□□□ 1.48
SLC38A10-203ENST00000539643 CEBPAP49715 358 aaPredicted RBP24.29■■□□□ 1.48
SLC38A10-203ENST00000539643 KNSTRNQ9Y448 316 aa24.29■■□□□ 1.48
SLC38A10-203ENST00000539643 AMER1Q5JTC6 1135 aaPredicted RBP24.29■■□□□ 1.48
SLC38A10-203ENST00000539643 FER1L4A9Z1Z3 1794 aa24.28■■□□□ 1.48
SLC38A10-203ENST00000539643 SENP3-EIF4A1A0A087X0R7 540 aa24.27■■□□□ 1.48
SLC38A10-203ENST00000539643 ALKQ9UM73 1620 aa24.26■■□□□ 1.47
SLC38A10-203ENST00000539643 C3P01024 1663 aa24.26■■□□□ 1.47
SLC38A10-203ENST00000539643 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.26■■□□□ 1.47
SLC38A10-203ENST00000539643 PUS7Q96PZ0 661 aaKnown RBP24.26■■□□□ 1.47
SLC38A10-203ENST00000539643 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
SLC38A10-203ENST00000539643 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
SLC38A10-203ENST00000539643 NLRP1Q9C000 1473 aa24.23■■□□□ 1.47
SLC38A10-203ENST00000539643 UBR1Q8IWV7 1749 aa24.22■■□□□ 1.47
SLC38A10-203ENST00000539643 YTHDC2Q9H6S0 1430 aaKnown RBP24.22■■□□□ 1.47
SLC38A10-203ENST00000539643 RNF123Q5XPI4 1314 aa24.21■■□□□ 1.47
SLC38A10-203ENST00000539643 PTPRMP28827 1452 aa24.21■■□□□ 1.47
SLC38A10-203ENST00000539643 TULP4Q9NRJ4 1543 aa24.21■■□□□ 1.47
SLC38A10-203ENST00000539643 INSRP06213 1382 aa24.2■■□□□ 1.46
SLC38A10-203ENST00000539643 STK26Q9P289 416 aa24.19■■□□□ 1.46
SLC38A10-203ENST00000539643 TMEM2Q9UHN6 1383 aa24.18■■□□□ 1.46
SLC38A10-203ENST00000539643 EVC2Q86UK5 1308 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms