RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TSR1Q2NL82 804 aaKnown RBP20.66■□□□□ 0.9
SCARB1-205ENST00000538291 WIZO95785 1651 aa20.66■□□□□ 0.9
SCARB1-205ENST00000538291 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
SCARB1-205ENST00000538291 API5Q9BZZ5 524 aaKnown RBP20.64■□□□□ 0.89
SCARB1-205ENST00000538291 IFIT2P09913 472 aaKnown RBP20.64■□□□□ 0.89
SCARB1-205ENST00000538291 TPM2P07951 284 aa20.64■□□□□ 0.89
SCARB1-205ENST00000538291 ZKSCAN1P17029 563 aaPredicted RBP20.64■□□□□ 0.89
SCARB1-205ENST00000538291 TRIM29Q14134 588 aa20.63■□□□□ 0.89
SCARB1-205ENST00000538291 USP47Q96K76 1375 aa20.62■□□□□ 0.89
SCARB1-205ENST00000538291 APPP05067 770 aa20.62■□□□□ 0.89
SCARB1-205ENST00000538291 ATF3P18847 181 aa20.62■□□□□ 0.89
SCARB1-205ENST00000538291 DDX11L8A8MPP1 907 aa20.62■□□□□ 0.89
SCARB1-205ENST00000538291 FAM69CQ0P6D2 419 aa20.62■□□□□ 0.89
SCARB1-205ENST00000538291 RAPGEF4Q8WZA2 1011 aa20.61■□□□□ 0.89
SCARB1-205ENST00000538291 MCTP1Q6DN14 999 aa20.61■□□□□ 0.89
SCARB1-205ENST00000538291 FANCD2Q9BXW9 1451 aa20.61■□□□□ 0.89
SCARB1-205ENST00000538291 DDX19BQ9UMR2 479 aa20.61■□□□□ 0.89
SCARB1-205ENST00000538291 APAF1O14727 1248 aa20.6■□□□□ 0.89
SCARB1-205ENST00000538291 RIPK4P57078 832 aa20.6■□□□□ 0.89
SCARB1-205ENST00000538291 G3BP1Q13283 466 aaKnown RBP eCLIP20.6■□□□□ 0.89
SCARB1-205ENST00000538291 DHX16O60231 1041 aaKnown RBP20.6■□□□□ 0.89
SCARB1-205ENST00000538291 TPM1P09493 284 aa20.6■□□□□ 0.89
SCARB1-205ENST00000538291 GOLGA6L19H0YKK7 550 aa20.6■□□□□ 0.89
SCARB1-205ENST00000538291 REC8O95072 547 aa20.6■□□□□ 0.89
SCARB1-205ENST00000538291 NECTIN2Q92692 538 aa20.6■□□□□ 0.89
SCARB1-205ENST00000538291 BECN2A8MW95 431 aa20.59■□□□□ 0.89
SCARB1-205ENST00000538291 FKBP5Q13451 457 aaPredicted RBP20.59■□□□□ 0.89
SCARB1-205ENST00000538291 TRDNQ13061 729 aa20.59■□□□□ 0.89
SCARB1-205ENST00000538291 FBXW7Q969H0 707 aa20.59■□□□□ 0.89
SCARB1-205ENST00000538291 COG6Q9Y2V7 657 aa20.59■□□□□ 0.89
SCARB1-205ENST00000538291 CPLX1O14810 134 aa20.59■□□□□ 0.89
SCARB1-205ENST00000538291 ROCK1Q13464 1354 aa20.58■□□□□ 0.89
SCARB1-205ENST00000538291 FAM161AQ3B820 660 aa20.58■□□□□ 0.89
SCARB1-205ENST00000538291 CCDC47Q96A33 483 aaKnown RBP20.58■□□□□ 0.88
SCARB1-205ENST00000538291 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
SCARB1-205ENST00000538291 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
SCARB1-205ENST00000538291 ARID3AQ99856 593 aa20.56■□□□□ 0.88
SCARB1-205ENST00000538291 PLIN1O60240 522 aa20.55■□□□□ 0.88
SCARB1-205ENST00000538291 DHX57Q6P158 1386 aaKnown RBP20.55■□□□□ 0.88
SCARB1-205ENST00000538291 STAC3Q96MF2 364 aa20.55■□□□□ 0.88
SCARB1-205ENST00000538291 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
SCARB1-205ENST00000538291 DDX49Q9Y6V7 483 aaKnown RBP20.55■□□□□ 0.88
SCARB1-205ENST00000538291 ANO2Q9NQ90 1003 aa20.55■□□□□ 0.88
SCARB1-205ENST00000538291 RRP1P56182 461 aaKnown RBP20.54■□□□□ 0.88
SCARB1-205ENST00000538291 HSP90AB4PQ58FF6 505 aa20.54■□□□□ 0.88
SCARB1-205ENST00000538291 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
SCARB1-205ENST00000538291 TSPYL4Q9UJ04 414 aa20.54■□□□□ 0.88
SCARB1-205ENST00000538291 NLRP2Q9NX02 1062 aa20.53■□□□□ 0.88
SCARB1-205ENST00000538291 GNAI1P63096 354 aa20.53■□□□□ 0.88
SCARB1-205ENST00000538291 ERICH2A1L162 156 aa20.53■□□□□ 0.88
SCARB1-205ENST00000538291 FOXD4L6Q3SYB3 417 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-205ENST00000538291 FOXD4L3Q6VB84 417 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-205ENST00000538291 CRBNQ96SW2 442 aa20.52■□□□□ 0.88
SCARB1-205ENST00000538291 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.88
SCARB1-205ENST00000538291 SKOR2Q2VWA4 1001 aaPredicted RBP20.52■□□□□ 0.87
SCARB1-205ENST00000538291 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
SCARB1-205ENST00000538291 KLHL34Q8N239 644 aa20.51■□□□□ 0.87
SCARB1-205ENST00000538291 MYOM3Q5VTT5 1437 aa20.51■□□□□ 0.87
SCARB1-205ENST00000538291 RUNDC1Q96C34 613 aa20.51■□□□□ 0.87
SCARB1-205ENST00000538291 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
SCARB1-205ENST00000538291 ANKRD20A12PQ8NF67 263 aa20.5■□□□□ 0.87
SCARB1-205ENST00000538291 EXOC6Q8TAG9 804 aa20.5■□□□□ 0.87
SCARB1-205ENST00000538291 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
SCARB1-205ENST00000538291 RIC3Q7Z5B4 369 aa20.49■□□□□ 0.87
SCARB1-205ENST00000538291 IPO7O95373 1038 aaKnown RBP20.49■□□□□ 0.87
SCARB1-205ENST00000538291 CCDC43Q96MW1 224 aaKnown RBP20.49■□□□□ 0.87
SCARB1-205ENST00000538291 ANO8Q9HCE9 1232 aaPredicted RBP20.49■□□□□ 0.87
SCARB1-205ENST00000538291 ZBED9Q6R2W3 1325 aa20.49■□□□□ 0.87
SCARB1-205ENST00000538291 PDE4AP27815 886 aa20.48■□□□□ 0.87
SCARB1-205ENST00000538291 PCMTD1Q96MG8 357 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-205ENST00000538291 ERC2O15083 957 aa20.48■□□□□ 0.87
SCARB1-205ENST00000538291 HOOK1Q9UJC3 728 aaKnown RBP20.48■□□□□ 0.87
SCARB1-205ENST00000538291 CCDC70Q6NSX1 233 aa20.47■□□□□ 0.87
SCARB1-205ENST00000538291 TNNT3P45378 269 aaPredicted RBP20.46■□□□□ 0.87
SCARB1-205ENST00000538291 HMOX1P09601 288 aa20.45■□□□□ 0.86
SCARB1-205ENST00000538291 NLRP6P59044 892 aa20.45■□□□□ 0.86
SCARB1-205ENST00000538291 CCAR2Q8N163 923 aaKnown RBP20.45■□□□□ 0.86
SCARB1-205ENST00000538291 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
SCARB1-205ENST00000538291 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
SCARB1-205ENST00000538291 NEUROD6Q96NK8 337 aa20.44■□□□□ 0.86
SCARB1-205ENST00000538291 AIMP1Q12904 312 aaKnown RBP20.44■□□□□ 0.86
SCARB1-205ENST00000538291 SAFBQ15424 915 aaKnown RBP eCLIP20.43■□□□□ 0.862e-6■■□□□ 11.8
SCARB1-205ENST00000538291 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
SCARB1-205ENST00000538291 RALYLQ86SE5 291 aaKnown RBP20.43■□□□□ 0.86
SCARB1-205ENST00000538291 BICD2Q8TD16 824 aa20.43■□□□□ 0.86
SCARB1-205ENST00000538291 NUTM2GQ5VZR2 741 aa20.42■□□□□ 0.86
SCARB1-205ENST00000538291 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
SCARB1-205ENST00000538291 CNKSR2Q8WXI2 1034 aa20.42■□□□□ 0.86
SCARB1-205ENST00000538291 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
SCARB1-205ENST00000538291 INTS3Q68E01 1043 aaKnown RBP20.42■□□□□ 0.86
SCARB1-205ENST00000538291 TSHZ2Q9NRE2 1034 aa20.42■□□□□ 0.86
SCARB1-205ENST00000538291 WASHC4Q2M389 1173 aa20.41■□□□□ 0.86
SCARB1-205ENST00000538291 SAMD1Q6SPF0 538 aaPredicted RBP20.41■□□□□ 0.86
SCARB1-205ENST00000538291 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.86
SCARB1-205ENST00000538291 CCDC27Q2M243 656 aa20.39■□□□□ 0.86
SCARB1-205ENST00000538291 CABP2Q9NPB3 220 aa20.39■□□□□ 0.86
SCARB1-205ENST00000538291 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.86
SCARB1-205ENST00000538291 VPS37CA5D8V6 355 aaPredicted RBP20.38■□□□□ 0.85
SCARB1-205ENST00000538291 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
SCARB1-205ENST00000538291 KRI1Q8N9T8 703 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms