RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 EIF2AK4Q9P2K8 1649 aaKnown RBP12.81□□□□□ -0.36
DDB1-211ENST00000538280 FBXO31Q5XUX0 539 aaPredicted RBP12.81□□□□□ -0.36
DDB1-211ENST00000538280 PRAG1Q86YV5 1406 aa12.8□□□□□ -0.36
DDB1-211ENST00000538280 CPS1P31327 1500 aa12.8□□□□□ -0.36
DDB1-211ENST00000538280 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
DDB1-211ENST00000538280 ROCK2O75116 1388 aaKnown RBP12.8□□□□□ -0.36
DDB1-211ENST00000538280 GPRASP1Q5JY77 1395 aa12.8□□□□□ -0.36
DDB1-211ENST00000538280 TNRQ92752 1358 aa12.8□□□□□ -0.36
DDB1-211ENST00000538280 IQGAP1P46940 1657 aa12.8□□□□□ -0.36
DDB1-211ENST00000538280 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
DDB1-211ENST00000538280 CEP152O94986 1710 aa12.79□□□□□ -0.36
DDB1-211ENST00000538280 HSPA1LP34931 641 aa12.79□□□□□ -0.36
DDB1-211ENST00000538280 PRDM15P57071 1507 aaPredicted RBP12.78□□□□□ -0.36
DDB1-211ENST00000538280 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
DDB1-211ENST00000538280 ZC3H13Q5T200 1668 aaKnown RBP12.78□□□□□ -0.36
DDB1-211ENST00000538280 PIP4K2BP78356 416 aa12.77□□□□□ -0.37
DDB1-211ENST00000538280 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
DDB1-211ENST00000538280 TRPM2O94759 1503 aa12.76□□□□□ -0.37
DDB1-211ENST00000538280 TET3O43151 1660 aa12.76□□□□□ -0.37
DDB1-211ENST00000538280 XIRP1Q702N8 1843 aaKnown RBP12.76□□□□□ -0.37
DDB1-211ENST00000538280 ABCC3O15438 1527 aa12.75□□□□□ -0.37
DDB1-211ENST00000538280 SPHKAPQ2M3C7 1700 aa12.75□□□□□ -0.37
DDB1-211ENST00000538280 CFAP65Q6ZU64 1925 aaKnown RBP12.74□□□□□ -0.37
DDB1-211ENST00000538280 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
DDB1-211ENST00000538280 SYNMO15061 1565 aa12.74□□□□□ -0.37
DDB1-211ENST00000538280 MED14O60244 1454 aa12.74□□□□□ -0.37
DDB1-211ENST00000538280 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
DDB1-211ENST00000538280 KIF3BO15066 747 aa12.74□□□□□ -0.37
DDB1-211ENST00000538280 CCDC184Q52MB2 194 aa12.74□□□□□ -0.37
DDB1-211ENST00000538280 NLRP1Q9C000 1473 aa12.72□□□□□ -0.37
DDB1-211ENST00000538280 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
DDB1-211ENST00000538280 LRRC7Q96NW7 1537 aa12.72□□□□□ -0.37
DDB1-211ENST00000538280 HNRNPUQ00839 825 aaKnown RBP eCLIP12.71□□□□□ -0.37
DDB1-211ENST00000538280 DCAF11Q8TEB1 546 aa12.71□□□□□ -0.37
DDB1-211ENST00000538280 ERVK-7P63135 1459 aa12.71□□□□□ -0.38
DDB1-211ENST00000538280 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
DDB1-211ENST00000538280 ZNF326Q5BKZ1 582 aaKnown RBP12.7□□□□□ -0.38
DDB1-211ENST00000538280 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
DDB1-211ENST00000538280 CLTCL1P53675 1640 aa12.7□□□□□ -0.38
DDB1-211ENST00000538280 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
DDB1-211ENST00000538280 FKBP8Q14318 412 aa12.69□□□□□ -0.38
DDB1-211ENST00000538280 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
DDB1-211ENST00000538280 WASHC2CQ9Y4E1 1318 aa12.68□□□□□ -0.38
DDB1-211ENST00000538280 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
DDB1-211ENST00000538280 LMTK2Q8IWU2 1503 aa12.67□□□□□ -0.38
DDB1-211ENST00000538280 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
DDB1-211ENST00000538280 KDM2AQ9Y2K7 1162 aa12.67□□□□□ -0.38
DDB1-211ENST00000538280 TOM1O60784 492 aa12.66□□□□□ -0.38
DDB1-211ENST00000538280 NEFLP07196 543 aa12.66□□□□□ -0.38
DDB1-211ENST00000538280 ANKLE2Q86XL3 938 aa12.66□□□□□ -0.38
DDB1-211ENST00000538280 PIK3C2BO00750 1634 aa12.66□□□□□ -0.38
DDB1-211ENST00000538280 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
DDB1-211ENST00000538280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDB1-211ENST00000538280 EFCAB6Q5THR3 1501 aa12.64□□□□□ -0.39
DDB1-211ENST00000538280 ERICH6BQ5W0A0 696 aa12.63□□□□□ -0.39
DDB1-211ENST00000538280 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
DDB1-211ENST00000538280 LRPPRCP42704 1394 aaKnown RBP12.63□□□□□ -0.39
DDB1-211ENST00000538280 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
DDB1-211ENST00000538280 ARHGAP23Q9P227 1491 aa12.63□□□□□ -0.39
DDB1-211ENST00000538280 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
DDB1-211ENST00000538280 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
DDB1-211ENST00000538280 NBPF1Q3BBV0 1214 aa12.62□□□□□ -0.39
DDB1-211ENST00000538280 THEMISQ8N1K5 641 aaPredicted RBP12.62□□□□□ -0.39
DDB1-211ENST00000538280 TESK2Q96S53 571 aa12.62□□□□□ -0.39
DDB1-211ENST00000538280 SLIT1O75093 1534 aa12.62□□□□□ -0.39
DDB1-211ENST00000538280 MYOM2P54296 1465 aa12.61□□□□□ -0.39
DDB1-211ENST00000538280 RALBP1Q15311 655 aa12.61□□□□□ -0.39
DDB1-211ENST00000538280 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
DDB1-211ENST00000538280 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
DDB1-211ENST00000538280 SMG6Q86US8 1419 aaKnown RBP12.61□□□□□ -0.39
DDB1-211ENST00000538280 KANK1Q14678 1352 aa12.6□□□□□ -0.39
DDB1-211ENST00000538280 FAM9BQ8IZU0 186 aa12.6□□□□□ -0.39
DDB1-211ENST00000538280 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
DDB1-211ENST00000538280 LTKP29376 864 aa12.59□□□□□ -0.39
DDB1-211ENST00000538280 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
DDB1-211ENST00000538280 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
DDB1-211ENST00000538280 KIF1BO60333 1816 aa12.59□□□□□ -0.39
DDB1-211ENST00000538280 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
DDB1-211ENST00000538280 INSRP06213 1382 aa12.58□□□□□ -0.4
DDB1-211ENST00000538280 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
DDB1-211ENST00000538280 PNISRQ8TF01 805 aaKnown RBP12.58□□□□□ -0.4
DDB1-211ENST00000538280 BCANQ96GW7 911 aa12.58□□□□□ -0.4
DDB1-211ENST00000538280 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
DDB1-211ENST00000538280 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
DDB1-211ENST00000538280 NRXN1Q9ULB1 1477 aa12.57□□□□□ -0.4
DDB1-211ENST00000538280 ADGRB3O60242 1522 aa12.57□□□□□ -0.4
DDB1-211ENST00000538280 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
DDB1-211ENST00000538280 MYOM1P52179 1685 aa12.56□□□□□ -0.4
DDB1-211ENST00000538280 KDM5AP29375 1690 aaKnown RBP12.55□□□□□ -0.4
DDB1-211ENST00000538280 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
DDB1-211ENST00000538280 NWD1Q149M9 1564 aa12.54□□□□□ -0.4
DDB1-211ENST00000538280 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
DDB1-211ENST00000538280 TMF1P82094 1093 aa12.53□□□□□ -0.4
DDB1-211ENST00000538280 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.4
DDB1-211ENST00000538280 RBM33Q96EV2 1170 aaKnown RBP12.52□□□□□ -0.41
DDB1-211ENST00000538280 PPLO60437 1756 aa12.51□□□□□ -0.41
DDB1-211ENST00000538280 TXNDC2Q86VQ3 553 aa12.51□□□□□ -0.41
DDB1-211ENST00000538280 NLRP13Q86W25 1043 aa12.51□□□□□ -0.41
DDB1-211ENST00000538280 NUDCQ9Y266 331 aa12.51□□□□□ -0.41
DDB1-211ENST00000538280 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms