RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
KDM2B-207ENST00000538243 TRIM6-TRIM34B2RNG4 842 aa20.35■□□□□ 0.85
KDM2B-207ENST00000538243 GOLGA6L4A6NEF3 574 aa20.35■□□□□ 0.85
KDM2B-207ENST00000538243 RPRD2Q5VT52 1461 aaKnown RBP20.34■□□□□ 0.85
KDM2B-207ENST00000538243 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
KDM2B-207ENST00000538243 RIPK4P57078 832 aa20.34■□□□□ 0.85
KDM2B-207ENST00000538243 SLFN5Q08AF3 891 aa20.34■□□□□ 0.85
KDM2B-207ENST00000538243 SUPT6HQ7KZ85 1726 aaKnown RBP20.34■□□□□ 0.85
KDM2B-207ENST00000538243 SKOR2Q2VWA4 1001 aaPredicted RBP20.33■□□□□ 0.85
KDM2B-207ENST00000538243 DRC7Q8IY82 874 aa20.33■□□□□ 0.84
KDM2B-207ENST00000538243 TMEM132EQ6IEE7 984 aa20.32■□□□□ 0.84
KDM2B-207ENST00000538243 ST18O60284 1047 aa20.32■□□□□ 0.84
KDM2B-207ENST00000538243 MCM4P33991 863 aa20.32■□□□□ 0.84
KDM2B-207ENST00000538243 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
KDM2B-207ENST00000538243 MCTP1Q6DN14 999 aa20.31■□□□□ 0.84
KDM2B-207ENST00000538243 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
KDM2B-207ENST00000538243 GGNBP2Q9H3C7 697 aa20.3■□□□□ 0.84
KDM2B-207ENST00000538243 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
KDM2B-207ENST00000538243 NGEFQ8N5V2 710 aa20.3■□□□□ 0.84
KDM2B-207ENST00000538243 SLC12A5Q9H2X9 1139 aa20.3■□□□□ 0.84
KDM2B-207ENST00000538243 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
KDM2B-207ENST00000538243 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
KDM2B-207ENST00000538243 ZRSR1Q15695 479 aaKnown RBP20.29■□□□□ 0.84
KDM2B-207ENST00000538243 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
KDM2B-207ENST00000538243 FGD1P98174 961 aa20.29■□□□□ 0.84
KDM2B-207ENST00000538243 ABCC5O15440 1437 aa20.29■□□□□ 0.84
KDM2B-207ENST00000538243 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
KDM2B-207ENST00000538243 MLECQ14165 292 aa20.29■□□□□ 0.84
KDM2B-207ENST00000538243 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
KDM2B-207ENST00000538243 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
KDM2B-207ENST00000538243 C1orf115Q9H7X2 142 aa20.28■□□□□ 0.84
KDM2B-207ENST00000538243 PTPRGP23470 1445 aa20.27■□□□□ 0.84
KDM2B-207ENST00000538243 RNF214Q8ND24 703 aa20.27■□□□□ 0.84
KDM2B-207ENST00000538243 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.84
KDM2B-207ENST00000538243 IGHDP01880 384 aa20.27■□□□□ 0.83
KDM2B-207ENST00000538243 MINK1Q8N4C8 1332 aaPredicted RBP20.27■□□□□ 0.83
KDM2B-207ENST00000538243 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
KDM2B-207ENST00000538243 R3HCC1Q9Y3T6 440 aaKnown RBP20.26■□□□□ 0.83
KDM2B-207ENST00000538243 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
KDM2B-207ENST00000538243 NUTM2FA1L443 756 aa20.25■□□□□ 0.83
KDM2B-207ENST00000538243 RTF1Q92541 710 aaKnown RBP20.25■□□□□ 0.83
KDM2B-207ENST00000538243 RILPL2Q969X0 211 aa20.25■□□□□ 0.83
KDM2B-207ENST00000538243 GRPEL1Q9HAV7 217 aa20.25■□□□□ 0.83
KDM2B-207ENST00000538243 KIAA1211Q6ZU35 1233 aa20.24■□□□□ 0.83
KDM2B-207ENST00000538243 HMOX1P09601 288 aa20.24■□□□□ 0.83
KDM2B-207ENST00000538243 CAVIN1Q6NZI2 390 aaKnown RBP20.24■□□□□ 0.83
KDM2B-207ENST00000538243 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
KDM2B-207ENST00000538243 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
KDM2B-207ENST00000538243 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
KDM2B-207ENST00000538243 RBM10P98175 930 aaKnown RBP20.24■□□□□ 0.83
KDM2B-207ENST00000538243 AFAP1Q8N556 730 aa20.24■□□□□ 0.83
KDM2B-207ENST00000538243 ESPNB1AK53 854 aa20.22■□□□□ 0.83
KDM2B-207ENST00000538243 HAP1P54257 671 aaPredicted RBP20.22■□□□□ 0.83
KDM2B-207ENST00000538243 BIVM-ERCC5R4GMW8 1640 aa20.21■□□□□ 0.83
KDM2B-207ENST00000538243 MPNDQ8N594 471 aa20.21■□□□□ 0.83
KDM2B-207ENST00000538243 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
KDM2B-207ENST00000538243 C8orf34Q49A92 452 aa20.21■□□□□ 0.83
KDM2B-207ENST00000538243 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
KDM2B-207ENST00000538243 EVC2Q86UK5 1308 aa20.2■□□□□ 0.82
KDM2B-207ENST00000538243 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
KDM2B-207ENST00000538243 HMMRO75330 724 aa20.2■□□□□ 0.82
KDM2B-207ENST00000538243 PKNOX2Q96KN3 472 aa20.19■□□□□ 0.82
KDM2B-207ENST00000538243 NOB1Q9ULX3 412 aaKnown RBP20.19■□□□□ 0.82
KDM2B-207ENST00000538243 KIF16BQ96L93 1317 aa20.18■□□□□ 0.82
KDM2B-207ENST00000538243 DHX29Q7Z478 1369 aaKnown RBP20.18■□□□□ 0.82
KDM2B-207ENST00000538243 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
KDM2B-207ENST00000538243 MVPQ14764 893 aaKnown RBP20.18■□□□□ 0.82
KDM2B-207ENST00000538243 LMOD2Q6P5Q4 547 aa20.17■□□□□ 0.82
KDM2B-207ENST00000538243 PANK2Q9BZ23 570 aa20.17■□□□□ 0.82
KDM2B-207ENST00000538243 STK31Q9BXU1 1019 aa20.17■□□□□ 0.82
KDM2B-207ENST00000538243 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
KDM2B-207ENST00000538243 AAMPQ13685 434 aa20.16■□□□□ 0.82
KDM2B-207ENST00000538243 PEG3Q9GZU2 1588 aa20.15■□□□□ 0.82
KDM2B-207ENST00000538243 DISP3Q9P2K9 1392 aa20.15■□□□□ 0.82
KDM2B-207ENST00000538243 PRPF40AO75400 957 aaKnown RBP20.15■□□□□ 0.82
KDM2B-207ENST00000538243 SEC24BO95487 1268 aa20.15■□□□□ 0.82
KDM2B-207ENST00000538243 CDK11BP21127 795 aaKnown RBP20.15■□□□□ 0.82
KDM2B-207ENST00000538243 RARSP54136 660 aaKnown RBP20.15■□□□□ 0.82
KDM2B-207ENST00000538243 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.15■□□□□ 0.82
KDM2B-207ENST00000538243 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.82
KDM2B-207ENST00000538243 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
KDM2B-207ENST00000538243 HECW1Q76N89 1606 aa20.14■□□□□ 0.81
KDM2B-207ENST00000538243 NUCB2P80303 420 aa20.14■□□□□ 0.81
KDM2B-207ENST00000538243 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
KDM2B-207ENST00000538243 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
KDM2B-207ENST00000538243 REC8O95072 547 aa20.12■□□□□ 0.81
KDM2B-207ENST00000538243 LRPPRCP42704 1394 aaKnown RBP20.12■□□□□ 0.81
KDM2B-207ENST00000538243 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
KDM2B-207ENST00000538243 CDC45O75419 566 aa20.11■□□□□ 0.81
KDM2B-207ENST00000538243 RNF123Q5XPI4 1314 aa20.11■□□□□ 0.81
KDM2B-207ENST00000538243 LMOD3Q0VAK6 560 aa20.09■□□□□ 0.81
KDM2B-207ENST00000538243 TNNQ9UQP3 1299 aa20.09■□□□□ 0.81
KDM2B-207ENST00000538243 PCDHB15Q9Y5E8 787 aa20.09■□□□□ 0.81
KDM2B-207ENST00000538243 PHF14O94880 888 aa20.09■□□□□ 0.81
KDM2B-207ENST00000538243 TMEM57Q8N5G2 664 aa20.09■□□□□ 0.81
KDM2B-207ENST00000538243 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
KDM2B-207ENST00000538243 XRCC6P12956 609 aaKnown RBP eCLIP20.08■□□□□ 0.81
KDM2B-207ENST00000538243 INTS3Q68E01 1043 aaKnown RBP20.08■□□□□ 0.81
KDM2B-207ENST00000538243 API5Q9BZZ5 524 aaKnown RBP20.08■□□□□ 0.81
KDM2B-207ENST00000538243 VGFO15240 615 aaPredicted RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms