RNA–Protein interactions for RNA: ENST00000537954.5

PGA3-203, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-203ENST00000537954 TRIM52Q96A61 297 aa25.16■■□□□ 1.62
PGA3-203ENST00000537954 STAG3Q9UJ98 1225 aa25.16■■□□□ 1.62
PGA3-203ENST00000537954 NOS1P29475 1434 aa25.12■■□□□ 1.61
PGA3-203ENST00000537954 KDM5AP29375 1690 aaKnown RBP25.11■■□□□ 1.61
PGA3-203ENST00000537954 RPRD2Q5VT52 1461 aaKnown RBP25.09■■□□□ 1.61
PGA3-203ENST00000537954 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
PGA3-203ENST00000537954 SLC52A1Q9NWF4 448 aa25.09■■□□□ 1.61
PGA3-203ENST00000537954 KCNA6P17658 529 aa25.08■■□□□ 1.61
PGA3-203ENST00000537954 MPHOSPH9Q99550 1183 aa25.07■■□□□ 1.6
PGA3-203ENST00000537954 SLC26A8Q96RN1 970 aa25.06■■□□□ 1.6
PGA3-203ENST00000537954 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
PGA3-203ENST00000537954 SLC4A1APQ9BWU0 796 aaKnown RBP25.06■■□□□ 1.6
PGA3-203ENST00000537954 XIRP1Q702N8 1843 aaKnown RBP25.06■■□□□ 1.6
PGA3-203ENST00000537954 ACIN1Q9UKV3 1341 aaKnown RBP25.06■■□□□ 1.6
PGA3-203ENST00000537954 TMEM94Q12767 1356 aa25.04■■□□□ 1.6
PGA3-203ENST00000537954 FAM135BQ49AJ0 1406 aa25.03■■□□□ 1.6
PGA3-203ENST00000537954 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
PGA3-203ENST00000537954 FOXD1Q16676 465 aa25.01■■□□□ 1.59
PGA3-203ENST00000537954 ADGRB3O60242 1522 aa25.01■■□□□ 1.59
PGA3-203ENST00000537954 PROSER2Q86WR7 435 aaPredicted RBP24.99■■□□□ 1.59
PGA3-203ENST00000537954 RBM33Q96EV2 1170 aaKnown RBP24.97■■□□□ 1.59
PGA3-203ENST00000537954 RGS17Q9UGC6 210 aaPredicted RBP24.97■■□□□ 1.59
PGA3-203ENST00000537954 TRPM2O94759 1503 aa24.96■■□□□ 1.59
PGA3-203ENST00000537954 ZFYVE9O95405 1425 aa24.95■■□□□ 1.59
PGA3-203ENST00000537954 DHX57Q6P158 1386 aaKnown RBP24.93■■□□□ 1.58
PGA3-203ENST00000537954 BCANQ96GW7 911 aa24.93■■□□□ 1.58
PGA3-203ENST00000537954 CLTCL1P53675 1640 aa24.93■■□□□ 1.58
PGA3-203ENST00000537954 NKTRP30414 1462 aaKnown RBP24.92■■□□□ 1.58
PGA3-203ENST00000537954 HDGFP51858 240 aaKnown RBP24.92■■□□□ 1.58
PGA3-203ENST00000537954 NWD1Q149M9 1564 aa24.92■■□□□ 1.58
PGA3-203ENST00000537954 PLEKHG1Q9ULL1 1385 aa24.92■■□□□ 1.58
PGA3-203ENST00000537954 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
PGA3-203ENST00000537954 ANKRD30BQ9BXX2 1392 aa24.89■■□□□ 1.57
PGA3-203ENST00000537954 TBX22Q9Y458 520 aa24.88■■□□□ 1.57
PGA3-203ENST00000537954 TMEM131LA2VDJ0 1609 aa24.87■■□□□ 1.57
PGA3-203ENST00000537954 SLAIN2Q9P270 581 aa24.87■■□□□ 1.57
PGA3-203ENST00000537954 MSH6P52701 1360 aa24.86■■□□□ 1.57
PGA3-203ENST00000537954 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
PGA3-203ENST00000537954 MYO5BQ9ULV0 1848 aa24.86■■□□□ 1.57
PGA3-203ENST00000537954 ROBO1Q9Y6N7 1651 aa24.85■■□□□ 1.57
PGA3-203ENST00000537954 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.84■■□□□ 1.57
PGA3-203ENST00000537954 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
PGA3-203ENST00000537954 CHD2O14647 1828 aaKnown RBP24.81■■□□□ 1.56
PGA3-203ENST00000537954 NCOA3Q9Y6Q9 1424 aa24.8■■□□□ 1.56
PGA3-203ENST00000537954 ADAMTS13Q76LX8 1427 aa24.79■■□□□ 1.56
PGA3-203ENST00000537954 KIF1BO60333 1816 aa24.78■■□□□ 1.56
PGA3-203ENST00000537954 NUTM2DQ5VT03 806 aaPredicted RBP24.78■■□□□ 1.56
PGA3-203ENST00000537954 POTEAQ6S8J7 498 aa24.78■■□□□ 1.56
PGA3-203ENST00000537954 CCDC144AA2RUR9 1427 aa24.78■■□□□ 1.56
PGA3-203ENST00000537954 PIK3R4Q99570 1358 aa24.75■■□□□ 1.55
PGA3-203ENST00000537954 SPATA31E1Q6ZUB1 1445 aa24.74■■□□□ 1.55
PGA3-203ENST00000537954 JCADQ9P266 1359 aa24.72■■□□□ 1.55
PGA3-203ENST00000537954 C19orf44Q9H6X5 657 aa24.72■■□□□ 1.55
PGA3-203ENST00000537954 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
PGA3-203ENST00000537954 C14orf37Q86TY3 774 aa24.69■■□□□ 1.54
PGA3-203ENST00000537954 CADPS2Q86UW7 1296 aa24.69■■□□□ 1.54
PGA3-203ENST00000537954 AMOTL2Q9Y2J4 779 aa24.69■■□□□ 1.54
PGA3-203ENST00000537954 PHLPP1O60346 1717 aa24.69■■□□□ 1.54
PGA3-203ENST00000537954 NEXMIFQ5QGS0 1516 aa24.67■■□□□ 1.54
PGA3-203ENST00000537954 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
PGA3-203ENST00000537954 ATF3P18847 181 aa24.66■■□□□ 1.54
PGA3-203ENST00000537954 SIN3AQ96ST3 1273 aa24.66■■□□□ 1.54
PGA3-203ENST00000537954 IFT172Q9UG01 1749 aa24.65■■□□□ 1.54
PGA3-203ENST00000537954 COL16A1Q07092 1604 aaPredicted RBP24.64■■□□□ 1.54
PGA3-203ENST00000537954 PPLO60437 1756 aa24.64■■□□□ 1.53
PGA3-203ENST00000537954 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.63■■□□□ 1.53
PGA3-203ENST00000537954 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
PGA3-203ENST00000537954 BRINP3Q76B58 766 aa24.59■■□□□ 1.53
PGA3-203ENST00000537954 AHDC1Q5TGY3 1603 aaPredicted RBP24.58■■□□□ 1.53
PGA3-203ENST00000537954 RGL3Q3MIN7 710 aa24.58■■□□□ 1.53
PGA3-203ENST00000537954 ZNF326Q5BKZ1 582 aaKnown RBP24.58■■□□□ 1.53
PGA3-203ENST00000537954 SETBP1Q9Y6X0 1596 aa24.58■■□□□ 1.52
PGA3-203ENST00000537954 LRP6O75581 1613 aa24.57■■□□□ 1.52
PGA3-203ENST00000537954 NRXN3Q9Y4C0 1643 aa24.57■■□□□ 1.52
PGA3-203ENST00000537954 METP08581 1390 aa24.56■■□□□ 1.52
PGA3-203ENST00000537954 DCCP43146 1447 aa24.56■■□□□ 1.52
PGA3-203ENST00000537954 RPGRIP1LQ68CZ1 1315 aa24.55■■□□□ 1.52
PGA3-203ENST00000537954 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
PGA3-203ENST00000537954 CCER1Q8TC90 406 aaPredicted RBP24.54■■□□□ 1.52
PGA3-203ENST00000537954 CLSPNQ9HAW4 1339 aa24.54■■□□□ 1.52
PGA3-203ENST00000537954 XRN1Q8IZH2 1706 aaKnown RBP24.52■■□□□ 1.52
PGA3-203ENST00000537954 MYOM2P54296 1465 aa24.51■■□□□ 1.51
PGA3-203ENST00000537954 MEX3CQ5U5Q3 659 aaKnown RBP24.5■■□□□ 1.51
PGA3-203ENST00000537954 ZNF772Q68DY9 489 aaPredicted RBP24.5■■□□□ 1.51
PGA3-203ENST00000537954 MST1RQ04912 1400 aa24.5■■□□□ 1.51
PGA3-203ENST00000537954 NRXN1Q9ULB1 1477 aa24.5■■□□□ 1.51
PGA3-203ENST00000537954 ADGRF5Q8IZF2 1346 aa24.49■■□□□ 1.51
PGA3-203ENST00000537954 SHPRHQ149N8 1683 aa24.49■■□□□ 1.51
PGA3-203ENST00000537954 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
PGA3-203ENST00000537954 ASXL1Q8IXJ9 1541 aa24.46■■□□□ 1.51
PGA3-203ENST00000537954 SETD1AO15047 1707 aaKnown RBP24.46■■□□□ 1.51
PGA3-203ENST00000537954 PIK3C2GO75747 1445 aa24.44■■□□□ 1.5
PGA3-203ENST00000537954 VGFO15240 615 aaPredicted RBP24.44■■□□□ 1.5
PGA3-203ENST00000537954 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
PGA3-203ENST00000537954 ADGRL3Q9HAR2 1447 aa24.44■■□□□ 1.5
PGA3-203ENST00000537954 LRRC59Q96AG4 307 aaKnown RBP24.43■■□□□ 1.5
PGA3-203ENST00000537954 NUTM2BA6NNL0 878 aaPredicted RBP24.42■■□□□ 1.5
PGA3-203ENST00000537954 NUTM2EB1AL46 878 aaPredicted RBP24.42■■□□□ 1.5
PGA3-203ENST00000537954 NUTM2AQ8IVF1 878 aaPredicted RBP24.42■■□□□ 1.5
PGA3-203ENST00000537954 KDM2AQ9Y2K7 1162 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms