RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 FOXD1Q16676 465 aa16.93■□□□□ 0.3
SNHG1-206ENST00000537925 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
SNHG1-206ENST00000537925 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
SNHG1-206ENST00000537925 LTKP29376 864 aa16.92■□□□□ 0.3
SNHG1-206ENST00000537925 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
SNHG1-206ENST00000537925 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
SNHG1-206ENST00000537925 EID1Q9Y6B2 187 aa16.9■□□□□ 0.3
SNHG1-206ENST00000537925 RIMS2Q9UQ26 1411 aa16.89■□□□□ 0.29
SNHG1-206ENST00000537925 PPLO60437 1756 aa16.87■□□□□ 0.29
SNHG1-206ENST00000537925 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
SNHG1-206ENST00000537925 LTBP4Q8N2S1 1624 aa16.87■□□□□ 0.29
SNHG1-206ENST00000537925 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
SNHG1-206ENST00000537925 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
SNHG1-206ENST00000537925 STRCP1A6NGW2 1772 aa16.85■□□□□ 0.29
SNHG1-206ENST00000537925 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
SNHG1-206ENST00000537925 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.84■□□□□ 0.296e-32■□□□□ 8.9
SNHG1-206ENST00000537925 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.29
SNHG1-206ENST00000537925 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.29
SNHG1-206ENST00000537925 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
SNHG1-206ENST00000537925 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
SNHG1-206ENST00000537925 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
SNHG1-206ENST00000537925 NRXN3Q9Y4C0 1643 aa16.81■□□□□ 0.28
SNHG1-206ENST00000537925 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
SNHG1-206ENST00000537925 CHD2O14647 1828 aaKnown RBP16.81■□□□□ 0.28
SNHG1-206ENST00000537925 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
SNHG1-206ENST00000537925 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
SNHG1-206ENST00000537925 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
SNHG1-206ENST00000537925 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
SNHG1-206ENST00000537925 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
SNHG1-206ENST00000537925 CPS1P31327 1500 aa16.77■□□□□ 0.28
SNHG1-206ENST00000537925 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.27
SNHG1-206ENST00000537925 SLC26A8Q96RN1 970 aa16.76■□□□□ 0.27
SNHG1-206ENST00000537925 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
SNHG1-206ENST00000537925 NWD1Q149M9 1564 aa16.75■□□□□ 0.27
SNHG1-206ENST00000537925 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
SNHG1-206ENST00000537925 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
SNHG1-206ENST00000537925 BCANQ96GW7 911 aa16.73■□□□□ 0.27
SNHG1-206ENST00000537925 TBX22Q9Y458 520 aa16.73■□□□□ 0.27
SNHG1-206ENST00000537925 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
SNHG1-206ENST00000537925 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
SNHG1-206ENST00000537925 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
SNHG1-206ENST00000537925 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
SNHG1-206ENST00000537925 PIK3R4Q99570 1358 aa16.7■□□□□ 0.26
SNHG1-206ENST00000537925 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
SNHG1-206ENST00000537925 ALKQ9UM73 1620 aa16.7■□□□□ 0.26
SNHG1-206ENST00000537925 KCNA6P17658 529 aa16.69■□□□□ 0.26
SNHG1-206ENST00000537925 XRN1Q8IZH2 1706 aaKnown RBP16.69■□□□□ 0.26
SNHG1-206ENST00000537925 MYOM2P54296 1465 aa16.69■□□□□ 0.26
SNHG1-206ENST00000537925 NKTRP30414 1462 aaKnown RBP16.68■□□□□ 0.26
SNHG1-206ENST00000537925 NRXN1Q9ULB1 1477 aa16.67■□□□□ 0.26
SNHG1-206ENST00000537925 ADGRF5Q8IZF2 1346 aa16.67■□□□□ 0.26
SNHG1-206ENST00000537925 PIK3C2GO75747 1445 aa16.66■□□□□ 0.26
SNHG1-206ENST00000537925 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
SNHG1-206ENST00000537925 LAMC1P11047 1609 aa16.65■□□□□ 0.26
SNHG1-206ENST00000537925 METP08581 1390 aa16.65■□□□□ 0.26
SNHG1-206ENST00000537925 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
SNHG1-206ENST00000537925 ASXL1Q8IXJ9 1541 aa16.61■□□□□ 0.25
SNHG1-206ENST00000537925 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
SNHG1-206ENST00000537925 TMEM94Q12767 1356 aa16.6■□□□□ 0.25
SNHG1-206ENST00000537925 KNDC1Q76NI1 1749 aa16.6■□□□□ 0.25
SNHG1-206ENST00000537925 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
SNHG1-206ENST00000537925 DCAF11Q8TEB1 546 aa16.6■□□□□ 0.25
SNHG1-206ENST00000537925 SIN3AQ96ST3 1273 aa16.6■□□□□ 0.25
SNHG1-206ENST00000537925 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
SNHG1-206ENST00000537925 CLSPNQ9HAW4 1339 aa16.59■□□□□ 0.25
SNHG1-206ENST00000537925 KIAA1210Q9ULL0 1709 aa16.58■□□□□ 0.24
SNHG1-206ENST00000537925 NCOA3Q9Y6Q9 1424 aa16.57■□□□□ 0.24
SNHG1-206ENST00000537925 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
SNHG1-206ENST00000537925 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
SNHG1-206ENST00000537925 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
SNHG1-206ENST00000537925 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
SNHG1-206ENST00000537925 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
SNHG1-206ENST00000537925 NALCNQ8IZF0 1738 aa16.55■□□□□ 0.24
SNHG1-206ENST00000537925 CFAP70Q5T0N1 1121 aa16.54■□□□□ 0.24
SNHG1-206ENST00000537925 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
SNHG1-206ENST00000537925 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
SNHG1-206ENST00000537925 TECPR2O15040 1411 aa16.54■□□□□ 0.24
SNHG1-206ENST00000537925 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
SNHG1-206ENST00000537925 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
SNHG1-206ENST00000537925 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
SNHG1-206ENST00000537925 L3MBTL2Q969R5 705 aa16.53■□□□□ 0.24
SNHG1-206ENST00000537925 YTHDC2Q9H6S0 1430 aaKnown RBP16.52■□□□□ 0.24
SNHG1-206ENST00000537925 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
SNHG1-206ENST00000537925 TOM1O60784 492 aa16.52■□□□□ 0.23
SNHG1-206ENST00000537925 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
SNHG1-206ENST00000537925 MSH6P52701 1360 aa16.5■□□□□ 0.23
SNHG1-206ENST00000537925 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
SNHG1-206ENST00000537925 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
SNHG1-206ENST00000537925 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
SNHG1-206ENST00000537925 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
SNHG1-206ENST00000537925 DLC1Q96QB1 1528 aa16.48■□□□□ 0.23
SNHG1-206ENST00000537925 STK26Q9P289 416 aa16.48■□□□□ 0.23
SNHG1-206ENST00000537925 DCCP43146 1447 aa16.47■□□□□ 0.23
SNHG1-206ENST00000537925 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
SNHG1-206ENST00000537925 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
SNHG1-206ENST00000537925 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
SNHG1-206ENST00000537925 FAM135BQ49AJ0 1406 aa16.46■□□□□ 0.23
SNHG1-206ENST00000537925 C14orf37Q86TY3 774 aa16.46■□□□□ 0.23
SNHG1-206ENST00000537925 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
SNHG1-206ENST00000537925 ROBO1Q9Y6N7 1651 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms