RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 DHX37Q8IY37 1157 aaKnown RBP6.88□□□□□ -1.31
CSMD1-215ENST00000537824 HMMRO75330 724 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 NUCB2P80303 420 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 CBX1P83916 185 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 PDCL3Q9H2J4 239 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 GRPEL1Q9HAV7 217 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 CALCOCO1Q9P1Z2 691 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 MEX3CQ5U5Q3 659 aaKnown RBP6.88□□□□□ -1.31
CSMD1-215ENST00000537824 FBXO3Q9UK99 471 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 TNNT1P13805 278 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 TTLL5Q6EMB2 1281 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 GIMAP7Q8NHV1 300 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 FOXD1Q16676 465 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 CEP89Q96ST8 783 aa6.88□□□□□ -1.31
CSMD1-215ENST00000537824 RP1P56715 2156 aa6.87□□□□□ -1.31
CSMD1-215ENST00000537824 PDILTQ8N807 584 aa6.87□□□□□ -1.31
CSMD1-215ENST00000537824 U2AF1L5P0DN76 240 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-215ENST00000537824 U2AF1Q01081 240 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSMD1-215ENST00000537824 TRIM5Q9C035 493 aa6.87□□□□□ -1.31
CSMD1-215ENST00000537824 ABCC9O60706 1549 aa6.87□□□□□ -1.31
CSMD1-215ENST00000537824 ANKRD45Q5TZF3 282 aa6.87□□□□□ -1.31
CSMD1-215ENST00000537824 IBSPP21815 317 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-215ENST00000537824 CT47B1P0C2W7 299 aaPredicted RBP6.87□□□□□ -1.31
CSMD1-215ENST00000537824 BICD2Q8TD16 824 aa6.87□□□□□ -1.31
CSMD1-215ENST00000537824 IPO7O95373 1038 aaKnown RBP6.87□□□□□ -1.31
CSMD1-215ENST00000537824 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
CSMD1-215ENST00000537824 KIF15Q9NS87 1388 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 FOSBP53539 338 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 SASS6Q6UVJ0 657 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 DYDC1Q8WWB3 177 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 PCMTD1Q96MG8 357 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-215ENST00000537824 CCDC112Q8NEF3 446 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 PLCD3Q8N3E9 789 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 ARHGAP35Q9NRY4 1499 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 CDR1P51861 262 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 REC8O95072 547 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 ZFP91Q96JP5 570 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-215ENST00000537824 NLRP13Q86W25 1043 aa6.86□□□□□ -1.31
CSMD1-215ENST00000537824 PDIA4P13667 645 aaKnown RBP6.85□□□□□ -1.31
CSMD1-215ENST00000537824 POGKQ9P215 609 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 ROCK2O75116 1388 aaKnown RBP6.85□□□□□ -1.31
CSMD1-215ENST00000537824 CGNL1Q0VF96 1302 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 VPS37CA5D8V6 355 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-215ENST00000537824 MYH11P35749 1972 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 TIGD1Q96MW7 591 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 RSPH4AQ5TD94 716 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 COG6Q9Y2V7 657 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 SMC2O95347 1197 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 MBD3O95983 291 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 ERCC4Q92889 916 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-215ENST00000537824 RB1CC1Q8TDY2 1594 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 MYH6P13533 1939 aa6.85□□□□□ -1.31
CSMD1-215ENST00000537824 FAM184AQ8NB25 1140 aa6.84□□□□□ -1.31
CSMD1-215ENST00000537824 RRP7AQ9Y3A4 280 aaKnown RBP6.84□□□□□ -1.31
CSMD1-215ENST00000537824 ANKRD20A12PQ8NF67 263 aa6.84□□□□□ -1.31
CSMD1-215ENST00000537824 INCENPQ9NQS7 918 aa6.84□□□□□ -1.31
CSMD1-215ENST00000537824 VPS8Q8N3P4 1428 aa6.84□□□□□ -1.31
CSMD1-215ENST00000537824 ZSCAN30Q86W11 494 aa6.84□□□□□ -1.31
CSMD1-215ENST00000537824 GTF2A1P52655 376 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-215ENST00000537824 NAP1L1P55209 391 aaKnown RBP6.84□□□□□ -1.31
CSMD1-215ENST00000537824 PAXIP1Q6ZW49 1069 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-215ENST00000537824 MCM4P33991 863 aa6.84□□□□□ -1.32
CSMD1-215ENST00000537824 FAM193AP78312 1265 aa6.83□□□□□ -1.32
CSMD1-215ENST00000537824 MAP1BP46821 2468 aaKnown RBP6.83□□□□□ -1.32
CSMD1-215ENST00000537824 PPP4R3BQ5MIZ7 849 aa6.83□□□□□ -1.32
CSMD1-215ENST00000537824 CCDC73Q6ZRK6 1079 aa6.83□□□□□ -1.32
CSMD1-215ENST00000537824 POLR3GO15318 223 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-215ENST00000537824 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
CSMD1-215ENST00000537824 ZRSR2Q15696 482 aaKnown RBP6.83□□□□□ -1.32
CSMD1-215ENST00000537824 TICAM2Q86XR7 235 aa6.83□□□□□ -1.32
CSMD1-215ENST00000537824 NAT10Q9H0A0 1025 aaKnown RBP6.83□□□□□ -1.32
CSMD1-215ENST00000537824 NEFHP12036 1026 aa6.82□□□□□ -1.32
CSMD1-215ENST00000537824 CCP110O43303 1012 aa6.82□□□□□ -1.32
CSMD1-215ENST00000537824 ANO2Q9NQ90 1003 aa6.82□□□□□ -1.32
CSMD1-215ENST00000537824 HOOK1Q9UJC3 728 aaKnown RBP6.82□□□□□ -1.32
CSMD1-215ENST00000537824 SMC3Q9UQE7 1217 aa6.82□□□□□ -1.32
CSMD1-215ENST00000537824 MYBBP1AQ9BQG0 1328 aaKnown RBP6.82□□□□□ -1.32
CSMD1-215ENST00000537824 EIF3JO75822 258 aaKnown RBP6.82□□□□□ -1.32
CSMD1-215ENST00000537824 AKNAQ7Z591 1439 aa6.82□□□□□ -1.32
CSMD1-215ENST00000537824 XPCQ01831 940 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-215ENST00000537824 SPDYE4A6NLX3 237 aa6.82□□□□□ -1.32
CSMD1-215ENST00000537824 RTF1Q92541 710 aaKnown RBP6.82□□□□□ -1.32
CSMD1-215ENST00000537824 SLC4A10Q6U841 1118 aa6.82□□□□□ -1.32
CSMD1-215ENST00000537824 PRPF40AO75400 957 aaKnown RBP6.81□□□□□ -1.32
CSMD1-215ENST00000537824 GTF2F1P35269 517 aaKnown RBP eCLIP6.81□□□□□ -1.32
CSMD1-215ENST00000537824 BACH2Q9BYV9 841 aa6.81□□□□□ -1.32
CSMD1-215ENST00000537824 CFDP1Q9UEE9 299 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-215ENST00000537824 CCDC27Q2M243 656 aa6.81□□□□□ -1.32
CSMD1-215ENST00000537824 OLFM4Q6UX06 510 aa6.81□□□□□ -1.32
CSMD1-215ENST00000537824 SOX12O15370 315 aa6.8□□□□□ -1.32
CSMD1-215ENST00000537824 ZKSCAN2Q63HK3 967 aa6.8□□□□□ -1.32
CSMD1-215ENST00000537824 DYNC1I1O14576 645 aa6.8□□□□□ -1.32
CSMD1-215ENST00000537824 LETM1O95202 739 aaPredicted RBP6.8□□□□□ -1.32
CSMD1-215ENST00000537824 STK31Q9BXU1 1019 aa6.8□□□□□ -1.32
CSMD1-215ENST00000537824 SRPK2P78362 688 aaKnown RBP6.8□□□□□ -1.32
CSMD1-215ENST00000537824 CCDC9Q9Y3X0 531 aaKnown RBP6.8□□□□□ -1.32
CSMD1-215ENST00000537824 LNPKQ9C0E8 428 aa6.8□□□□□ -1.32
CSMD1-215ENST00000537824 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
CSMD1-215ENST00000537824 FIBPO43427 364 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms