RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 UNC13BO14795 1591 aa15.02■□□□□ -0
CCDC170-202ENST00000537358 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
CCDC170-202ENST00000537358 ILDR2Q71H61 639 aa15.01□□□□□ -0.01
CCDC170-202ENST00000537358 PPP1R15AO75807 674 aaPredicted RBP15□□□□□ -0.01
CCDC170-202ENST00000537358 ITGAEP38570 1179 aa15□□□□□ -0.01
CCDC170-202ENST00000537358 SOCS7O14512 581 aa14.99□□□□□ -0.01
CCDC170-202ENST00000537358 MYO5BQ9ULV0 1848 aa14.99□□□□□ -0.01
CCDC170-202ENST00000537358 IQGAP3Q86VI3 1631 aa14.98□□□□□ -0.01
CCDC170-202ENST00000537358 XIRP1Q702N8 1843 aaKnown RBP14.97□□□□□ -0.01
CCDC170-202ENST00000537358 ALKQ9UM73 1620 aa14.97□□□□□ -0.01
CCDC170-202ENST00000537358 CHGAP10645 457 aaKnown RBP14.97□□□□□ -0.01
CCDC170-202ENST00000537358 KCNA6P17658 529 aa14.97□□□□□ -0.01
CCDC170-202ENST00000537358 SLC26A8Q96RN1 970 aa14.97□□□□□ -0.01
CCDC170-202ENST00000537358 E9PCH4 1651 aa14.97□□□□□ -0.01
CCDC170-202ENST00000537358 MED1Q15648 1581 aaPredicted RBP14.96□□□□□ -0.01
CCDC170-202ENST00000537358 PROSER2Q86WR7 435 aaPredicted RBP14.96□□□□□ -0.01
CCDC170-202ENST00000537358 PPARGC1BQ86YN6 1023 aaKnown RBP14.96□□□□□ -0.01
CCDC170-202ENST00000537358 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.96□□□□□ -0.01
CCDC170-202ENST00000537358 NUP155O75694 1391 aa14.96□□□□□ -0.02
CCDC170-202ENST00000537358 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
CCDC170-202ENST00000537358 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
CCDC170-202ENST00000537358 NKTRP30414 1462 aaKnown RBP14.95□□□□□ -0.02
CCDC170-202ENST00000537358 PLEKHG1Q9ULL1 1385 aa14.94□□□□□ -0.02
CCDC170-202ENST00000537358 TMEM94Q12767 1356 aa14.93□□□□□ -0.02
CCDC170-202ENST00000537358 ZFYVE9O95405 1425 aa14.92□□□□□ -0.02
CCDC170-202ENST00000537358 NWD1Q149M9 1564 aa14.92□□□□□ -0.02
CCDC170-202ENST00000537358 MSH6P52701 1360 aa14.91□□□□□ -0.02
CCDC170-202ENST00000537358 CHD2O14647 1828 aaKnown RBP14.9□□□□□ -0.02
CCDC170-202ENST00000537358 FAM135BQ49AJ0 1406 aa14.89□□□□□ -0.03
CCDC170-202ENST00000537358 DIP2AQ14689 1571 aa14.89□□□□□ -0.03
CCDC170-202ENST00000537358 SPHKAPQ2M3C7 1700 aa14.89□□□□□ -0.03
CCDC170-202ENST00000537358 TBX22Q9Y458 520 aa14.88□□□□□ -0.03
CCDC170-202ENST00000537358 RRBP1Q9P2E9 1410 aaKnown RBP14.86□□□□□ -0.03
CCDC170-202ENST00000537358 C14orf37Q86TY3 774 aa14.86□□□□□ -0.03
CCDC170-202ENST00000537358 ROBO1Q9Y6N7 1651 aa14.86□□□□□ -0.03
CCDC170-202ENST00000537358 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
CCDC170-202ENST00000537358 RBM33Q96EV2 1170 aaKnown RBP14.85□□□□□ -0.03
CCDC170-202ENST00000537358 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
CCDC170-202ENST00000537358 TRPM2O94759 1503 aa14.84□□□□□ -0.03
CCDC170-202ENST00000537358 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
CCDC170-202ENST00000537358 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
CCDC170-202ENST00000537358 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.03
CCDC170-202ENST00000537358 SLAIN2Q9P270 581 aa14.82□□□□□ -0.04
CCDC170-202ENST00000537358 ADAMTS13Q76LX8 1427 aa14.82□□□□□ -0.04
CCDC170-202ENST00000537358 KIF1BO60333 1816 aa14.81□□□□□ -0.04
CCDC170-202ENST00000537358 ATF3P18847 181 aa14.8□□□□□ -0.04
CCDC170-202ENST00000537358 TRIM52Q96A61 297 aa14.8□□□□□ -0.04
CCDC170-202ENST00000537358 NAIPQ13075 1403 aa14.8□□□□□ -0.04
CCDC170-202ENST00000537358 PHLPP1O60346 1717 aa14.8□□□□□ -0.04
CCDC170-202ENST00000537358 CADPS2Q86UW7 1296 aa14.79□□□□□ -0.04
CCDC170-202ENST00000537358 C19orf44Q9H6X5 657 aa14.78□□□□□ -0.04
CCDC170-202ENST00000537358 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
CCDC170-202ENST00000537358 SETBP1Q9Y6X0 1596 aa14.77□□□□□ -0.04
CCDC170-202ENST00000537358 RNF216Q9NWF9 866 aaPredicted RBP14.77□□□□□ -0.05
CCDC170-202ENST00000537358 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.77□□□□□ -0.05
CCDC170-202ENST00000537358 CLTCL1P53675 1640 aa14.77□□□□□ -0.05
CCDC170-202ENST00000537358 HFM1A2PYH4 1435 aa14.76□□□□□ -0.05
CCDC170-202ENST00000537358 JCADQ9P266 1359 aa14.74□□□□□ -0.05
CCDC170-202ENST00000537358 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
CCDC170-202ENST00000537358 NRXN3Q9Y4C0 1643 aa14.74□□□□□ -0.05
CCDC170-202ENST00000537358 XRN1Q8IZH2 1706 aaKnown RBP14.72□□□□□ -0.05
CCDC170-202ENST00000537358 NEXMIFQ5QGS0 1516 aa14.72□□□□□ -0.05
CCDC170-202ENST00000537358 VGFO15240 615 aaPredicted RBP14.72□□□□□ -0.05
CCDC170-202ENST00000537358 DCCP43146 1447 aa14.72□□□□□ -0.05
CCDC170-202ENST00000537358 PTPRUQ92729 1446 aa14.72□□□□□ -0.05
CCDC170-202ENST00000537358 COL16A1Q07092 1604 aaPredicted RBP14.7□□□□□ -0.06
CCDC170-202ENST00000537358 RPGRIP1LQ68CZ1 1315 aa14.69□□□□□ -0.06
CCDC170-202ENST00000537358 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
CCDC170-202ENST00000537358 METP08581 1390 aa14.69□□□□□ -0.06
CCDC170-202ENST00000537358 AHDC1Q5TGY3 1603 aaPredicted RBP14.69□□□□□ -0.06
CCDC170-202ENST00000537358 SPATA31A6Q5VVP1 1343 aa14.67□□□□□ -0.06
CCDC170-202ENST00000537358 MEX3CQ5U5Q3 659 aaKnown RBP14.67□□□□□ -0.06
CCDC170-202ENST00000537358 RGS17Q9UGC6 210 aaPredicted RBP14.67□□□□□ -0.06
CCDC170-202ENST00000537358 ACIN1Q9UKV3 1341 aaKnown RBP14.66□□□□□ -0.06
CCDC170-202ENST00000537358 SHPRHQ149N8 1683 aa14.66□□□□□ -0.06
CCDC170-202ENST00000537358 ADGRL3Q9HAR2 1447 aa14.66□□□□□ -0.06
CCDC170-202ENST00000537358 PPLO60437 1756 aa14.65□□□□□ -0.06
CCDC170-202ENST00000537358 BRINP3Q76B58 766 aa14.65□□□□□ -0.06
CCDC170-202ENST00000537358 CCDC144AA2RUR9 1427 aa14.65□□□□□ -0.06
CCDC170-202ENST00000537358 NALCNQ8IZF0 1738 aa14.63□□□□□ -0.07
CCDC170-202ENST00000537358 ASXL1Q8IXJ9 1541 aa14.63□□□□□ -0.07
CCDC170-202ENST00000537358 MST1RQ04912 1400 aa14.63□□□□□ -0.07
CCDC170-202ENST00000537358 PTCH1Q13635 1447 aa14.63□□□□□ -0.07
CCDC170-202ENST00000537358 SETD1AO15047 1707 aaKnown RBP14.62□□□□□ -0.07
CCDC170-202ENST00000537358 POTEAQ6S8J7 498 aa14.62□□□□□ -0.07
CCDC170-202ENST00000537358 NHSL1Q5SYE7 1610 aa14.62□□□□□ -0.07
CCDC170-202ENST00000537358 ZNF772Q68DY9 489 aaPredicted RBP14.61□□□□□ -0.07
CCDC170-202ENST00000537358 LRRC59Q96AG4 307 aaKnown RBP14.6□□□□□ -0.07
CCDC170-202ENST00000537358 RGL3Q3MIN7 710 aa14.59□□□□□ -0.07
CCDC170-202ENST00000537358 MPHOSPH9Q99550 1183 aa14.59□□□□□ -0.07
CCDC170-202ENST00000537358 ANKRD30BQ9BXX2 1392 aa14.59□□□□□ -0.07
CCDC170-202ENST00000537358 SETD5Q9C0A6 1442 aa14.58□□□□□ -0.07
CCDC170-202ENST00000537358 NUTM2BA6NNL0 878 aaPredicted RBP14.58□□□□□ -0.08
CCDC170-202ENST00000537358 NUTM2EB1AL46 878 aaPredicted RBP14.58□□□□□ -0.08
CCDC170-202ENST00000537358 NUTM2AQ8IVF1 878 aaPredicted RBP14.58□□□□□ -0.08
CCDC170-202ENST00000537358 LRP6O75581 1613 aa14.58□□□□□ -0.08
CCDC170-202ENST00000537358 ROBO2Q9HCK4 1378 aa14.57□□□□□ -0.08
CCDC170-202ENST00000537358 PRAG1Q86YV5 1406 aa14.57□□□□□ -0.08
CCDC170-202ENST00000537358 C1orf167Q5SNV9 1468 aa14.56□□□□□ -0.08
CCDC170-202ENST00000537358 IFT172Q9UG01 1749 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms