RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 PDE4AP27815 886 aa11.91□□□□□ -0.5
YBX3-206ENST00000536823 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
YBX3-206ENST00000536823 MAP3K9P80192 1104 aa11.9□□□□□ -0.5
YBX3-206ENST00000536823 PCDHGA10Q9Y5H3 936 aa11.9□□□□□ -0.5
YBX3-206ENST00000536823 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
YBX3-206ENST00000536823 CARMIL2Q6F5E8 1435 aa11.89□□□□□ -0.51
YBX3-206ENST00000536823 KIAA1468Q9P260 1216 aa11.88□□□□□ -0.51
YBX3-206ENST00000536823 ADCY10Q96PN6 1610 aa11.88□□□□□ -0.51
YBX3-206ENST00000536823 UGGT2Q9NYU1 1516 aa11.87□□□□□ -0.51
YBX3-206ENST00000536823 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
YBX3-206ENST00000536823 DISP1Q96F81 1524 aa11.86□□□□□ -0.51
YBX3-206ENST00000536823 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
YBX3-206ENST00000536823 TNIKQ9UKE5 1360 aa11.86□□□□□ -0.51
YBX3-206ENST00000536823 CTTNBP2Q8WZ74 1663 aa11.86□□□□□ -0.51
YBX3-206ENST00000536823 PTPRGP23470 1445 aa11.86□□□□□ -0.51
YBX3-206ENST00000536823 SEPT9Q9UHD8 586 aaPredicted RBP11.85□□□□□ -0.51
YBX3-206ENST00000536823 EEA1Q15075 1411 aa11.85□□□□□ -0.51
YBX3-206ENST00000536823 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
YBX3-206ENST00000536823 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
YBX3-206ENST00000536823 FBXW7Q969H0 707 aa11.84□□□□□ -0.51
YBX3-206ENST00000536823 MAPKBP1O60336 1514 aa11.84□□□□□ -0.51
YBX3-206ENST00000536823 KIAA0556O60303 1618 aa11.83□□□□□ -0.52
YBX3-206ENST00000536823 DDX27Q96GQ7 796 aaKnown RBP11.83□□□□□ -0.52
YBX3-206ENST00000536823 TSR3Q9UJK0 312 aaKnown RBP11.82□□□□□ -0.52
YBX3-206ENST00000536823 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
YBX3-206ENST00000536823 ONECUT3O60422 494 aaPredicted RBP11.81□□□□□ -0.52
YBX3-206ENST00000536823 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
YBX3-206ENST00000536823 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
YBX3-206ENST00000536823 KIF13AQ9H1H9 1805 aa11.81□□□□□ -0.52
YBX3-206ENST00000536823 NRG2O14511 850 aaPredicted RBP11.8□□□□□ -0.52
YBX3-206ENST00000536823 LRCH3Q96II8 777 aa11.8□□□□□ -0.52
YBX3-206ENST00000536823 UHRF1BP1LA0JNW5 1464 aa11.8□□□□□ -0.52
YBX3-206ENST00000536823 ABCC2Q92887 1545 aa11.8□□□□□ -0.52
YBX3-206ENST00000536823 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
YBX3-206ENST00000536823 PHF14O94880 888 aa11.79□□□□□ -0.52
YBX3-206ENST00000536823 FAM98CQ17RN3 349 aaKnown RBP11.79□□□□□ -0.52
YBX3-206ENST00000536823 ABCC10Q5T3U5 1492 aa11.78□□□□□ -0.52
YBX3-206ENST00000536823 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
YBX3-206ENST00000536823 UACAQ9BZF9 1416 aa11.77□□□□□ -0.52
YBX3-206ENST00000536823 PRKD2Q9BZL6 878 aa11.77□□□□□ -0.53
YBX3-206ENST00000536823 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
YBX3-206ENST00000536823 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
YBX3-206ENST00000536823 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
YBX3-206ENST00000536823 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
YBX3-206ENST00000536823 KDM5BQ9UGL1 1544 aa11.74□□□□□ -0.53
YBX3-206ENST00000536823 KIF21BO75037 1637 aa11.73□□□□□ -0.53
YBX3-206ENST00000536823 MFSD10Q14728 455 aa11.73□□□□□ -0.53
YBX3-206ENST00000536823 PLB1Q6P1J6 1458 aa11.72□□□□□ -0.53
YBX3-206ENST00000536823 ASXL2Q76L83 1435 aa11.72□□□□□ -0.53
YBX3-206ENST00000536823 FAM69CQ0P6D2 419 aa11.72□□□□□ -0.53
YBX3-206ENST00000536823 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
YBX3-206ENST00000536823 ABCA8O94911 1581 aa11.71□□□□□ -0.53
YBX3-206ENST00000536823 SAMD9Q5K651 1589 aa11.71□□□□□ -0.53
YBX3-206ENST00000536823 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.54
YBX3-206ENST00000536823 FAM9AQ8IZU1 332 aaPredicted RBP11.7□□□□□ -0.54
YBX3-206ENST00000536823 EPAS1Q99814 870 aa11.7□□□□□ -0.54
YBX3-206ENST00000536823 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
YBX3-206ENST00000536823 GLI2P10070 1586 aa11.68□□□□□ -0.54
YBX3-206ENST00000536823 PPP4CP60510 307 aa11.68□□□□□ -0.54
YBX3-206ENST00000536823 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
YBX3-206ENST00000536823 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
YBX3-206ENST00000536823 TSPOAP1O95153 1857 aa11.66□□□□□ -0.54
YBX3-206ENST00000536823 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.54
YBX3-206ENST00000536823 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
YBX3-206ENST00000536823 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
YBX3-206ENST00000536823 ZNF775Q96BV0 537 aaPredicted RBP11.64□□□□□ -0.55
YBX3-206ENST00000536823 EFCAB5A4FU69 1503 aa11.64□□□□□ -0.55
YBX3-206ENST00000536823 PPRC1Q5VV67 1664 aaKnown RBP11.63□□□□□ -0.55
YBX3-206ENST00000536823 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
YBX3-206ENST00000536823 MTRQ99707 1265 aa11.63□□□□□ -0.55
YBX3-206ENST00000536823 IL21Q9HBE4 155 aa11.63□□□□□ -0.55
YBX3-206ENST00000536823 PDZRN3Q9UPQ7 1066 aa11.63□□□□□ -0.55
YBX3-206ENST00000536823 FHOD3Q2V2M9 1422 aa11.62□□□□□ -0.55
YBX3-206ENST00000536823 MAP3K4Q9Y6R4 1608 aa11.62□□□□□ -0.55
YBX3-206ENST00000536823 PACS2Q86VP3 889 aa11.62□□□□□ -0.55
YBX3-206ENST00000536823 KDM6BO15054 1643 aa11.61□□□□□ -0.55
YBX3-206ENST00000536823 RAPGEF6Q8TEU7 1601 aa11.61□□□□□ -0.55
YBX3-206ENST00000536823 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
YBX3-206ENST00000536823 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.6□□□□□ -0.55
YBX3-206ENST00000536823 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
YBX3-206ENST00000536823 ATP10BO94823 1461 aa11.59□□□□□ -0.55
YBX3-206ENST00000536823 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
YBX3-206ENST00000536823 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.56
YBX3-206ENST00000536823 SAMD7Q7Z3H4 446 aa11.58□□□□□ -0.56
YBX3-206ENST00000536823 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
YBX3-206ENST00000536823 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
YBX3-206ENST00000536823 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
YBX3-206ENST00000536823 CFAP43Q8NDM7 1665 aa11.56□□□□□ -0.56
YBX3-206ENST00000536823 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
YBX3-206ENST00000536823 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
YBX3-206ENST00000536823 DDX12PQ92771 950 aa11.55□□□□□ -0.56
YBX3-206ENST00000536823 DPYSL4O14531 572 aa11.54□□□□□ -0.56
YBX3-206ENST00000536823 ARHGAP35Q9NRY4 1499 aa11.54□□□□□ -0.56
YBX3-206ENST00000536823 MAGI3Q5TCQ9 1506 aa11.54□□□□□ -0.56
YBX3-206ENST00000536823 CD109Q6YHK3 1445 aa11.53□□□□□ -0.56
YBX3-206ENST00000536823 SMAPO00193 183 aa11.53□□□□□ -0.56
YBX3-206ENST00000536823 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
YBX3-206ENST00000536823 TSR1Q2NL82 804 aaKnown RBP11.52□□□□□ -0.57
YBX3-206ENST00000536823 ABCA9Q8IUA7 1624 aa11.52□□□□□ -0.57
YBX3-206ENST00000536823 MAP3K7O43318 606 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms