RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PLA2G2EQ9NZK7 142 aa12.55□□□□□ -0.4
CLIP1-207ENST00000536634 PTPN5P54829 565 aa12.54□□□□□ -0.4
CLIP1-207ENST00000536634 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
CLIP1-207ENST00000536634 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
CLIP1-207ENST00000536634 RNF40O75150 1001 aa12.5□□□□□ -0.41
CLIP1-207ENST00000536634 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
CLIP1-207ENST00000536634 HCSTQ9UBK5 93 aa12.5□□□□□ -0.41
CLIP1-207ENST00000536634 HDGFP51858 240 aaKnown RBP12.49□□□□□ -0.41
CLIP1-207ENST00000536634 TSR3Q9UJK0 312 aaKnown RBP12.48□□□□□ -0.41
CLIP1-207ENST00000536634 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
CLIP1-207ENST00000536634 TPRNQ4KMQ1 711 aa12.46□□□□□ -0.41
CLIP1-207ENST00000536634 PPP4CP60510 307 aa12.45□□□□□ -0.42
CLIP1-207ENST00000536634 MDM2Q00987 491 aaPredicted RBP12.45□□□□□ -0.42
CLIP1-207ENST00000536634 AK7Q96M32 723 aa12.45□□□□□ -0.42
CLIP1-207ENST00000536634 DAXXQ9UER7 740 aaPredicted RBP12.45□□□□□ -0.42
CLIP1-207ENST00000536634 TRIM66O15016 1216 aa12.44□□□□□ -0.42
CLIP1-207ENST00000536634 SLC10A3P09131 477 aa12.42□□□□□ -0.42
CLIP1-207ENST00000536634 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
CLIP1-207ENST00000536634 REPIN1Q9BWE0 567 aaKnown RBP12.41□□□□□ -0.42
CLIP1-207ENST00000536634 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
CLIP1-207ENST00000536634 AMHR2Q16671 573 aa12.4□□□□□ -0.42
CLIP1-207ENST00000536634 DDX11L8A8MPP1 907 aa12.39□□□□□ -0.43
CLIP1-207ENST00000536634 APLP1P51693 650 aa12.39□□□□□ -0.43
CLIP1-207ENST00000536634 GPCPD1Q9NPB8 672 aa12.38□□□□□ -0.43
CLIP1-207ENST00000536634 CLCN1P35523 988 aa12.37□□□□□ -0.43
CLIP1-207ENST00000536634 CFHP08603 1231 aa12.36□□□□□ -0.43
CLIP1-207ENST00000536634 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
CLIP1-207ENST00000536634 TTLL12Q14166 644 aaPredicted RBP12.36□□□□□ -0.43
CLIP1-207ENST00000536634 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
CLIP1-207ENST00000536634 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
CLIP1-207ENST00000536634 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
CLIP1-207ENST00000536634 PDE4DQ08499 809 aa12.34□□□□□ -0.43
CLIP1-207ENST00000536634 SULF1Q8IWU6 871 aa12.34□□□□□ -0.43
CLIP1-207ENST00000536634 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
CLIP1-207ENST00000536634 FAM217BQ9NTX9 383 aaPredicted RBP12.34□□□□□ -0.43
CLIP1-207ENST00000536634 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
CLIP1-207ENST00000536634 CD46P15529 392 aa12.31□□□□□ -0.44
CLIP1-207ENST00000536634 RSPH4AQ5TD94 716 aa12.3□□□□□ -0.44
CLIP1-207ENST00000536634 KMT5BQ4FZB7 885 aa12.29□□□□□ -0.44
CLIP1-207ENST00000536634 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
CLIP1-207ENST00000536634 SSTR3P32745 418 aaPredicted RBP12.28□□□□□ -0.44
CLIP1-207ENST00000536634 GCGRP47871 477 aa12.28□□□□□ -0.44
CLIP1-207ENST00000536634 MS4A1P11836 297 aa12.26□□□□□ -0.45
CLIP1-207ENST00000536634 MTRQ99707 1265 aa12.26□□□□□ -0.45
CLIP1-207ENST00000536634 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
CLIP1-207ENST00000536634 TJAP1Q5JTD0 557 aa12.25□□□□□ -0.45
CLIP1-207ENST00000536634 PCDHB3Q9Y5E6 796 aa12.25□□□□□ -0.45
CLIP1-207ENST00000536634 ITGBL1O95965 494 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-207ENST00000536634 COPS2P61201 443 aa12.24□□□□□ -0.45
CLIP1-207ENST00000536634 GPBP1L1Q9HC44 474 aaPredicted RBP12.24□□□□□ -0.45
CLIP1-207ENST00000536634 FUT2Q10981 343 aa12.23□□□□□ -0.45
CLIP1-207ENST00000536634 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
CLIP1-207ENST00000536634 PUS10Q3MIT2 529 aaKnown RBP12.22□□□□□ -0.45
CLIP1-207ENST00000536634 ZNF516Q92618 1163 aa12.21□□□□□ -0.45
CLIP1-207ENST00000536634 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
CLIP1-207ENST00000536634 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
CLIP1-207ENST00000536634 KDM4AO75164 1064 aa12.19□□□□□ -0.46
CLIP1-207ENST00000536634 RGS20O76081 388 aa12.19□□□□□ -0.46
CLIP1-207ENST00000536634 KCNC4Q03721 635 aa12.18□□□□□ -0.46
CLIP1-207ENST00000536634 KDM4CQ9H3R0 1056 aa12.18□□□□□ -0.46
CLIP1-207ENST00000536634 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
CLIP1-207ENST00000536634 MORN1Q5T089 497 aa12.17□□□□□ -0.46
CLIP1-207ENST00000536634 HLA-CQ95604 372 aa12.17□□□□□ -0.46
CLIP1-207ENST00000536634 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
CLIP1-207ENST00000536634 HOXA2O43364 376 aa12.14□□□□□ -0.47
CLIP1-207ENST00000536634 TLL1O43897 1013 aa12.14□□□□□ -0.47
CLIP1-207ENST00000536634 ZPR1O75312 459 aa12.14□□□□□ -0.47
CLIP1-207ENST00000536634 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
CLIP1-207ENST00000536634 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
CLIP1-207ENST00000536634 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
CLIP1-207ENST00000536634 NEUROD2Q15784 382 aa12.13□□□□□ -0.47
CLIP1-207ENST00000536634 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
CLIP1-207ENST00000536634 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
CLIP1-207ENST00000536634 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
CLIP1-207ENST00000536634 NR1I2O75469 434 aa12.12□□□□□ -0.47
CLIP1-207ENST00000536634 USP46P62068 366 aa12.12□□□□□ -0.47
CLIP1-207ENST00000536634 GUCA2AQ02747 115 aa12.12□□□□□ -0.47
CLIP1-207ENST00000536634 IRX2Q9BZI1 471 aaPredicted RBP12.12□□□□□ -0.47
CLIP1-207ENST00000536634 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
CLIP1-207ENST00000536634 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
CLIP1-207ENST00000536634 GRIPAP1Q4V328 841 aa12.09□□□□□ -0.47
CLIP1-207ENST00000536634 MOXD2PA6NHM9 499 aa12.08□□□□□ -0.48
CLIP1-207ENST00000536634 NDUFV2P19404 249 aa12.08□□□□□ -0.48
CLIP1-207ENST00000536634 THAP11Q96EK4 314 aa12.08□□□□□ -0.48
CLIP1-207ENST00000536634 PLEKHG3A1L390 1219 aa12.06□□□□□ -0.48
CLIP1-207ENST00000536634 RNF19BQ6ZMZ0 732 aa12.06□□□□□ -0.48
CLIP1-207ENST00000536634 A0A0G2JS52 829 aa12.05□□□□□ -0.48
CLIP1-207ENST00000536634 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
CLIP1-207ENST00000536634 ADH1BP00325 375 aa12.04□□□□□ -0.48
CLIP1-207ENST00000536634 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
CLIP1-207ENST00000536634 FDX1P10109 184 aa12.03□□□□□ -0.48
CLIP1-207ENST00000536634 MYSM1Q5VVJ2 828 aa12.03□□□□□ -0.48
CLIP1-207ENST00000536634 SPSB2Q99619 263 aa12.03□□□□□ -0.48
CLIP1-207ENST00000536634 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
CLIP1-207ENST00000536634 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
CLIP1-207ENST00000536634 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
CLIP1-207ENST00000536634 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
CLIP1-207ENST00000536634 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
CLIP1-207ENST00000536634 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-207ENST00000536634 SPTLC1O15269 473 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms