RNA–Protein interactions for RNA: ENST00000536559.1

CCND1-203, Transcript of cyclin D1, humanhuman

TSL 3 BASIC

Gene CCND1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-203ENST00000536559 PROSER2Q86WR7 435 aaPredicted RBP25.18■■□□□ 1.62
CCND1-203ENST00000536559 RIMS2Q9UQ26 1411 aa25.17■■□□□ 1.62
CCND1-203ENST00000536559 E9PCH4 1651 aa25.17■■□□□ 1.62
CCND1-203ENST00000536559 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
CCND1-203ENST00000536559 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
CCND1-203ENST00000536559 PLEKHG1Q9ULL1 1385 aa25.14■■□□□ 1.61
CCND1-203ENST00000536559 TMEM131LA2VDJ0 1609 aa25.13■■□□□ 1.61
CCND1-203ENST00000536559 MYO5BQ9ULV0 1848 aa25.13■■□□□ 1.61
CCND1-203ENST00000536559 ZFYVE9O95405 1425 aa25.12■■□□□ 1.61
CCND1-203ENST00000536559 TMEM94Q12767 1356 aa25.11■■□□□ 1.61
CCND1-203ENST00000536559 ILDR2Q71H61 639 aa25.1■■□□□ 1.61
CCND1-203ENST00000536559 TBX22Q9Y458 520 aa25.09■■□□□ 1.61
CCND1-203ENST00000536559 ALKQ9UM73 1620 aa25.08■■□□□ 1.6
CCND1-203ENST00000536559 NUTM2DQ5VT03 806 aaPredicted RBP25.07■■□□□ 1.6
CCND1-203ENST00000536559 NKTRP30414 1462 aaKnown RBP25.07■■□□□ 1.6
CCND1-203ENST00000536559 TRIM52Q96A61 297 aa25.06■■□□□ 1.6
CCND1-203ENST00000536559 ZNF326Q5BKZ1 582 aaKnown RBP25.05■■□□□ 1.6
CCND1-203ENST00000536559 XIRP1Q702N8 1843 aaKnown RBP25.05■■□□□ 1.6
CCND1-203ENST00000536559 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
CCND1-203ENST00000536559 MSH6P52701 1360 aa25.04■■□□□ 1.6
CCND1-203ENST00000536559 NAIPQ13075 1403 aa25.03■■□□□ 1.6
CCND1-203ENST00000536559 SOCS7O14512 581 aa25.02■■□□□ 1.6
CCND1-203ENST00000536559 C14orf37Q86TY3 774 aa25.02■■□□□ 1.6
CCND1-203ENST00000536559 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
CCND1-203ENST00000536559 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
CCND1-203ENST00000536559 SPHKAPQ2M3C7 1700 aa25■■□□□ 1.59
CCND1-203ENST00000536559 CHD2O14647 1828 aaKnown RBP24.99■■□□□ 1.59
CCND1-203ENST00000536559 FAM135BQ49AJ0 1406 aa24.99■■□□□ 1.59
CCND1-203ENST00000536559 PIK3R4Q99570 1358 aa24.98■■□□□ 1.59
CCND1-203ENST00000536559 DIP2AQ14689 1571 aa24.97■■□□□ 1.59
CCND1-203ENST00000536559 MED1Q15648 1581 aaPredicted RBP24.97■■□□□ 1.59
CCND1-203ENST00000536559 HFM1A2PYH4 1435 aa24.96■■□□□ 1.59
CCND1-203ENST00000536559 SLAIN2Q9P270 581 aa24.95■■□□□ 1.58
CCND1-203ENST00000536559 SLC4A1APQ9BWU0 796 aaKnown RBP24.94■■□□□ 1.58
CCND1-203ENST00000536559 ADAMTS13Q76LX8 1427 aa24.94■■□□□ 1.58
CCND1-203ENST00000536559 NCOA3Q9Y6Q9 1424 aa24.94■■□□□ 1.58
CCND1-203ENST00000536559 TRPM2O94759 1503 aa24.92■■□□□ 1.58
CCND1-203ENST00000536559 AMOTL2Q9Y2J4 779 aa24.92■■□□□ 1.58
CCND1-203ENST00000536559 ATF3P18847 181 aa24.9■■□□□ 1.58
CCND1-203ENST00000536559 C19orf44Q9H6X5 657 aa24.89■■□□□ 1.58
CCND1-203ENST00000536559 CADPS2Q86UW7 1296 aa24.88■■□□□ 1.57
CCND1-203ENST00000536559 KIF1BO60333 1816 aa24.88■■□□□ 1.57
CCND1-203ENST00000536559 ROBO1Q9Y6N7 1651 aa24.88■■□□□ 1.57
CCND1-203ENST00000536559 CLTCL1P53675 1640 aa24.86■■□□□ 1.57
CCND1-203ENST00000536559 VGFO15240 615 aaPredicted RBP24.85■■□□□ 1.57
CCND1-203ENST00000536559 SETBP1Q9Y6X0 1596 aa24.83■■□□□ 1.57
CCND1-203ENST00000536559 ACIN1Q9UKV3 1341 aaKnown RBP24.83■■□□□ 1.56
CCND1-203ENST00000536559 RPGRIP1LQ68CZ1 1315 aa24.81■■□□□ 1.56
CCND1-203ENST00000536559 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
CCND1-203ENST00000536559 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
CCND1-203ENST00000536559 METP08581 1390 aa24.77■■□□□ 1.56
CCND1-203ENST00000536559 PHLPP1O60346 1717 aa24.76■■□□□ 1.55
CCND1-203ENST00000536559 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.76■■□□□ 1.55
CCND1-203ENST00000536559 NRXN3Q9Y4C0 1643 aa24.75■■□□□ 1.55
CCND1-203ENST00000536559 MPHOSPH9Q99550 1183 aa24.74■■□□□ 1.55
CCND1-203ENST00000536559 JCADQ9P266 1359 aa24.73■■□□□ 1.55
CCND1-203ENST00000536559 FOXD1Q16676 465 aa24.73■■□□□ 1.55
CCND1-203ENST00000536559 CCDC144AA2RUR9 1427 aa24.72■■□□□ 1.55
CCND1-203ENST00000536559 DCCP43146 1447 aa24.72■■□□□ 1.55
CCND1-203ENST00000536559 XRN1Q8IZH2 1706 aaKnown RBP24.71■■□□□ 1.55
CCND1-203ENST00000536559 RGL3Q3MIN7 710 aa24.67■■□□□ 1.54
CCND1-203ENST00000536559 BRINP3Q76B58 766 aa24.66■■□□□ 1.54
CCND1-203ENST00000536559 SETD5Q9C0A6 1442 aa24.65■■□□□ 1.54
CCND1-203ENST00000536559 SPATA31A6Q5VVP1 1343 aa24.63■■□□□ 1.53
CCND1-203ENST00000536559 ADGRL3Q9HAR2 1447 aa24.63■■□□□ 1.53
CCND1-203ENST00000536559 MEX3CQ5U5Q3 659 aaKnown RBP24.63■■□□□ 1.53
CCND1-203ENST00000536559 RGS17Q9UGC6 210 aaPredicted RBP24.63■■□□□ 1.53
CCND1-203ENST00000536559 PPLO60437 1756 aa24.62■■□□□ 1.53
CCND1-203ENST00000536559 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
CCND1-203ENST00000536559 AHDC1Q5TGY3 1603 aaPredicted RBP24.61■■□□□ 1.53
CCND1-203ENST00000536559 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
CCND1-203ENST00000536559 MST1RQ04912 1400 aa24.6■■□□□ 1.53
CCND1-203ENST00000536559 PTCH1Q13635 1447 aa24.6■■□□□ 1.53
CCND1-203ENST00000536559 LRRC59Q96AG4 307 aaKnown RBP24.57■■□□□ 1.52
CCND1-203ENST00000536559 ASXL1Q8IXJ9 1541 aa24.56■■□□□ 1.52
CCND1-203ENST00000536559 ADGRF5Q8IZF2 1346 aa24.56■■□□□ 1.52
CCND1-203ENST00000536559 ROBO2Q9HCK4 1378 aa24.55■■□□□ 1.52
CCND1-203ENST00000536559 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
CCND1-203ENST00000536559 POTEAQ6S8J7 498 aa24.54■■□□□ 1.52
CCND1-203ENST00000536559 SETD1AO15047 1707 aaKnown RBP24.54■■□□□ 1.52
CCND1-203ENST00000536559 NALCNQ8IZF0 1738 aa24.53■■□□□ 1.52
CCND1-203ENST00000536559 STK26Q9P289 416 aa24.53■■□□□ 1.52
CCND1-203ENST00000536559 NUTM2BA6NNL0 878 aaPredicted RBP24.52■■□□□ 1.52
CCND1-203ENST00000536559 NUTM2EB1AL46 878 aaPredicted RBP24.52■■□□□ 1.52
CCND1-203ENST00000536559 NUTM2AQ8IVF1 878 aaPredicted RBP24.52■■□□□ 1.52
CCND1-203ENST00000536559 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
CCND1-203ENST00000536559 SHPRHQ149N8 1683 aa24.51■■□□□ 1.51
CCND1-203ENST00000536559 ZNF772Q68DY9 489 aaPredicted RBP24.51■■□□□ 1.51
CCND1-203ENST00000536559 PRAG1Q86YV5 1406 aa24.51■■□□□ 1.51
CCND1-203ENST00000536559 C1orf167Q5SNV9 1468 aa24.5■■□□□ 1.51
CCND1-203ENST00000536559 NHSL1Q5SYE7 1610 aa24.47■■□□□ 1.51
CCND1-203ENST00000536559 TMEM132EQ6IEE7 984 aa24.46■■□□□ 1.51
CCND1-203ENST00000536559 LRPPRCP42704 1394 aaKnown RBP24.45■■□□□ 1.5
CCND1-203ENST00000536559 IFT172Q9UG01 1749 aa24.45■■□□□ 1.5
CCND1-203ENST00000536559 DDX17Q92841 729 aaKnown RBP24.45■■□□□ 1.5
CCND1-203ENST00000536559 LRP6O75581 1613 aa24.44■■□□□ 1.5
CCND1-203ENST00000536559 ORAI2Q96SN7 254 aa24.44■■□□□ 1.5
CCND1-203ENST00000536559 PIK3C2GO75747 1445 aa24.44■■□□□ 1.5
CCND1-203ENST00000536559 ABCC11Q96J66 1382 aa24.43■■□□□ 1.5
CCND1-203ENST00000536559 ESCO1Q5FWF5 840 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms