RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 LMTK2Q8IWU2 1503 aa11.87□□□□□ -0.51
PRKCH-202ENST00000536400 CHD2O14647 1828 aaKnown RBP11.87□□□□□ -0.51
PRKCH-202ENST00000536400 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
PRKCH-202ENST00000536400 NOS1P29475 1434 aa11.86□□□□□ -0.51
PRKCH-202ENST00000536400 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
PRKCH-202ENST00000536400 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-202ENST00000536400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRKCH-202ENST00000536400 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
PRKCH-202ENST00000536400 CROCC2H7BZ55 1655 aa11.85□□□□□ -0.51
PRKCH-202ENST00000536400 RRP7BPQ9NSQ0 103 aa11.85□□□□□ -0.51
PRKCH-202ENST00000536400 ABCC5O15440 1437 aa11.85□□□□□ -0.51
PRKCH-202ENST00000536400 KANK1Q14678 1352 aa11.84□□□□□ -0.51
PRKCH-202ENST00000536400 TRIM52Q96A61 297 aa11.84□□□□□ -0.51
PRKCH-202ENST00000536400 NCOA3Q9Y6Q9 1424 aa11.84□□□□□ -0.51
PRKCH-202ENST00000536400 SHPRHQ149N8 1683 aa11.84□□□□□ -0.51
PRKCH-202ENST00000536400 AHDC1Q5TGY3 1603 aaPredicted RBP11.83□□□□□ -0.52
PRKCH-202ENST00000536400 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
PRKCH-202ENST00000536400 SLC52A1Q9NWF4 448 aa11.83□□□□□ -0.52
PRKCH-202ENST00000536400 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
PRKCH-202ENST00000536400 ZFYVE9O95405 1425 aa11.82□□□□□ -0.52
PRKCH-202ENST00000536400 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
PRKCH-202ENST00000536400 MYO5BQ9ULV0 1848 aa11.81□□□□□ -0.52
PRKCH-202ENST00000536400 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
PRKCH-202ENST00000536400 RXRBP28702 533 aa11.81□□□□□ -0.52
PRKCH-202ENST00000536400 MEX3CQ5U5Q3 659 aaKnown RBP11.81□□□□□ -0.52
PRKCH-202ENST00000536400 DAPK1P53355 1430 aa11.8□□□□□ -0.52
PRKCH-202ENST00000536400 BCANQ96GW7 911 aa11.8□□□□□ -0.52
PRKCH-202ENST00000536400 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
PRKCH-202ENST00000536400 TBX22Q9Y458 520 aa11.79□□□□□ -0.52
PRKCH-202ENST00000536400 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
PRKCH-202ENST00000536400 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
PRKCH-202ENST00000536400 CADPS2Q86UW7 1296 aa11.78□□□□□ -0.52
PRKCH-202ENST00000536400 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.52
PRKCH-202ENST00000536400 RPRD2Q5VT52 1461 aaKnown RBP11.77□□□□□ -0.52
PRKCH-202ENST00000536400 NPM3O75607 178 aaKnown RBP11.77□□□□□ -0.53
PRKCH-202ENST00000536400 C19orf44Q9H6X5 657 aa11.77□□□□□ -0.53
PRKCH-202ENST00000536400 TMEM131LA2VDJ0 1609 aa11.77□□□□□ -0.53
PRKCH-202ENST00000536400 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
PRKCH-202ENST00000536400 HDGFP51858 240 aaKnown RBP11.76□□□□□ -0.53
PRKCH-202ENST00000536400 ANKRD30AQ9BXX3 1397 aa11.76□□□□□ -0.53
PRKCH-202ENST00000536400 ADAMTS13Q76LX8 1427 aa11.76□□□□□ -0.53
PRKCH-202ENST00000536400 ATF3P18847 181 aa11.75□□□□□ -0.53
PRKCH-202ENST00000536400 C14orf37Q86TY3 774 aa11.75□□□□□ -0.53
PRKCH-202ENST00000536400 AFF2P51816 1311 aa11.75□□□□□ -0.53
PRKCH-202ENST00000536400 PIK3R4Q99570 1358 aa11.75□□□□□ -0.53
PRKCH-202ENST00000536400 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
PRKCH-202ENST00000536400 BRINP3Q76B58 766 aa11.74□□□□□ -0.53
PRKCH-202ENST00000536400 NUTM2BA6NNL0 878 aaPredicted RBP11.73□□□□□ -0.53
PRKCH-202ENST00000536400 NUTM2EB1AL46 878 aaPredicted RBP11.73□□□□□ -0.53
PRKCH-202ENST00000536400 RGS12O14924 1447 aa11.73□□□□□ -0.53
PRKCH-202ENST00000536400 MAPK8IP2Q13387 824 aaPredicted RBP11.73□□□□□ -0.53
PRKCH-202ENST00000536400 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
PRKCH-202ENST00000536400 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
PRKCH-202ENST00000536400 SETD5Q9C0A6 1442 aa11.73□□□□□ -0.53
PRKCH-202ENST00000536400 CHIC2Q9UKJ5 165 aa11.73□□□□□ -0.53
PRKCH-202ENST00000536400 NHSL1Q5SYE7 1610 aa11.71□□□□□ -0.53
PRKCH-202ENST00000536400 ASXL1Q8IXJ9 1541 aa11.71□□□□□ -0.53
PRKCH-202ENST00000536400 ADGRL2O95490 1459 aa11.71□□□□□ -0.53
PRKCH-202ENST00000536400 DCCP43146 1447 aa11.71□□□□□ -0.53
PRKCH-202ENST00000536400 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.53
PRKCH-202ENST00000536400 PTPRUQ92729 1446 aa11.7□□□□□ -0.54
PRKCH-202ENST00000536400 AMOTL2Q9Y2J4 779 aa11.7□□□□□ -0.54
PRKCH-202ENST00000536400 EP400Q96L91 3159 aa11.69□□□□□ -0.54
PRKCH-202ENST00000536400 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-202ENST00000536400 QTRT2Q9H974 415 aaKnown RBP11.69□□□□□ -0.54
PRKCH-202ENST00000536400 TRPM2O94759 1503 aa11.69□□□□□ -0.54
PRKCH-202ENST00000536400 MST1RQ04912 1400 aa11.69□□□□□ -0.54
PRKCH-202ENST00000536400 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
PRKCH-202ENST00000536400 LRRC59Q96AG4 307 aaKnown RBP11.68□□□□□ -0.54
PRKCH-202ENST00000536400 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
PRKCH-202ENST00000536400 XRN1Q8IZH2 1706 aaKnown RBP11.67□□□□□ -0.54
PRKCH-202ENST00000536400 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
PRKCH-202ENST00000536400 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
PRKCH-202ENST00000536400 UNC13BO14795 1591 aa11.67□□□□□ -0.54
PRKCH-202ENST00000536400 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
PRKCH-202ENST00000536400 E9PCH4 1651 aa11.65□□□□□ -0.54
PRKCH-202ENST00000536400 NRXN3Q9Y4C0 1643 aa11.65□□□□□ -0.54
PRKCH-202ENST00000536400 ATAD2Q6PL18 1390 aa11.65□□□□□ -0.55
PRKCH-202ENST00000536400 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
PRKCH-202ENST00000536400 SETBP1Q9Y6X0 1596 aa11.63□□□□□ -0.55
PRKCH-202ENST00000536400 LOC105371045A0A1W2PR82 267 aa11.63□□□□□ -0.55
PRKCH-202ENST00000536400 DDX17Q92841 729 aaKnown RBP11.63□□□□□ -0.55
PRKCH-202ENST00000536400 LAMC1P11047 1609 aa11.62□□□□□ -0.55
PRKCH-202ENST00000536400 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
PRKCH-202ENST00000536400 ADGRL3Q9HAR2 1447 aa11.61□□□□□ -0.55
PRKCH-202ENST00000536400 ADAMTS2O95450 1211 aa11.61□□□□□ -0.55
PRKCH-202ENST00000536400 IQGAP3Q86VI3 1631 aa11.6□□□□□ -0.55
PRKCH-202ENST00000536400 NALCNQ8IZF0 1738 aa11.6□□□□□ -0.55
PRKCH-202ENST00000536400 METP08581 1390 aa11.6□□□□□ -0.55
PRKCH-202ENST00000536400 APLP2Q06481 763 aa11.6□□□□□ -0.55
PRKCH-202ENST00000536400 FNBP4Q8N3X1 1017 aaPredicted RBP11.6□□□□□ -0.55
PRKCH-202ENST00000536400 USP21Q9UK80 565 aa11.6□□□□□ -0.55
PRKCH-202ENST00000536400 TRPC5Q9UL62 973 aaPredicted RBP11.6□□□□□ -0.55
PRKCH-202ENST00000536400 ATRNO75882 1429 aa11.59□□□□□ -0.55
PRKCH-202ENST00000536400 PTCH1Q13635 1447 aa11.59□□□□□ -0.55
PRKCH-202ENST00000536400 SOS2Q07890 1332 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-202ENST00000536400 C1orf167Q5SNV9 1468 aa11.58□□□□□ -0.56
PRKCH-202ENST00000536400 FAM50AQ14320 339 aaKnown RBP11.58□□□□□ -0.56
PRKCH-202ENST00000536400 CCDC125Q86Z20 511 aa11.57□□□□□ -0.56
PRKCH-202ENST00000536400 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms