RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 CHMP7Q8WUX9 453 aaPredicted RBP8.8□□□□□ -1
USP30-208ENST00000536393 RCAN3Q9UKA8 241 aa8.8□□□□□ -1
USP30-208ENST00000536393 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
USP30-208ENST00000536393 TMF1P82094 1093 aa8.79□□□□□ -1
USP30-208ENST00000536393 B4GALNT3Q6L9W6 998 aa8.79□□□□□ -1
USP30-208ENST00000536393 UHRF1BP1LA0JNW5 1464 aa8.77□□□□□ -1
USP30-208ENST00000536393 SHROOM2Q13796 1616 aa8.77□□□□□ -1.01
USP30-208ENST00000536393 SBNO2Q9Y2G9 1366 aa8.77□□□□□ -1.01
USP30-208ENST00000536393 PER1O15534 1290 aaPredicted RBP8.77□□□□□ -1.01
USP30-208ENST00000536393 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
USP30-208ENST00000536393 SAMD9LQ8IVG5 1584 aa8.77□□□□□ -1.01
USP30-208ENST00000536393 MYO5CQ9NQX4 1742 aa8.77□□□□□ -1.01
USP30-208ENST00000536393 CDC42BPBQ9Y5S2 1711 aa8.77□□□□□ -1.01
USP30-208ENST00000536393 ABCC2Q92887 1545 aa8.76□□□□□ -1.01
USP30-208ENST00000536393 CCDC184Q52MB2 194 aa8.76□□□□□ -1.01
USP30-208ENST00000536393 CENPQQ7L2Z9 268 aaPredicted RBP8.76□□□□□ -1.01
USP30-208ENST00000536393 BACH2Q9BYV9 841 aa8.76□□□□□ -1.01
USP30-208ENST00000536393 TRPM2O94759 1503 aa8.75□□□□□ -1.01
USP30-208ENST00000536393 ST20-MTHFSA0A0A6YYL1 179 aa8.75□□□□□ -1.01
USP30-208ENST00000536393 A2MP01023 1474 aa8.75□□□□□ -1.01
USP30-208ENST00000536393 ZNF644Q9H582 1327 aaPredicted RBP8.75□□□□□ -1.01
USP30-208ENST00000536393 TTC37Q6PGP7 1564 aa8.74□□□□□ -1.01
USP30-208ENST00000536393 PTPRTO14522 1441 aa8.74□□□□□ -1.01
USP30-208ENST00000536393 DEKP35659 375 aaKnown RBP8.74□□□□□ -1.01
USP30-208ENST00000536393 PUS7Q96PZ0 661 aaKnown RBP8.74□□□□□ -1.01
USP30-208ENST00000536393 IQGAP1P46940 1657 aa8.74□□□□□ -1.01
USP30-208ENST00000536393 DEPDC5O75140 1603 aa8.73□□□□□ -1.01
USP30-208ENST00000536393 MYOM2P54296 1465 aa8.73□□□□□ -1.01
USP30-208ENST00000536393 SCAF11Q99590 1463 aaKnown RBP8.73□□□□□ -1.01
USP30-208ENST00000536393 PITPNM1O00562 1244 aa8.73□□□□□ -1.01
USP30-208ENST00000536393 SPHKAPQ2M3C7 1700 aa8.73□□□□□ -1.01
USP30-208ENST00000536393 CEP152O94986 1710 aa8.72□□□□□ -1.01
USP30-208ENST00000536393 ASXL1Q8IXJ9 1541 aa8.72□□□□□ -1.01
USP30-208ENST00000536393 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
USP30-208ENST00000536393 SSUH2Q9Y2M2 353 aa8.72□□□□□ -1.01
USP30-208ENST00000536393 PLCH2O75038 1416 aa8.71□□□□□ -1.01
USP30-208ENST00000536393 PDE4AP27815 886 aa8.71□□□□□ -1.02
USP30-208ENST00000536393 TESK2Q96S53 571 aa8.71□□□□□ -1.02
USP30-208ENST00000536393 TET3O43151 1660 aa8.71□□□□□ -1.02
USP30-208ENST00000536393 PLA2R1Q13018 1463 aa8.7□□□□□ -1.02
USP30-208ENST00000536393 ARHGAP5Q13017 1502 aa8.7□□□□□ -1.02
USP30-208ENST00000536393 MADDQ8WXG6 1647 aa8.7□□□□□ -1.02
USP30-208ENST00000536393 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
USP30-208ENST00000536393 ZNF521Q96K83 1311 aa8.7□□□□□ -1.02
USP30-208ENST00000536393 ABCC1P33527 1531 aa8.7□□□□□ -1.02
USP30-208ENST00000536393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
USP30-208ENST00000536393 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
USP30-208ENST00000536393 VWDEQ8N2E2 1590 aa8.69□□□□□ -1.02
USP30-208ENST00000536393 SETBP1Q9Y6X0 1596 aa8.69□□□□□ -1.02
USP30-208ENST00000536393 MYO3AQ8NEV4 1616 aa8.69□□□□□ -1.02
USP30-208ENST00000536393 IRX6P78412 446 aaPredicted RBP8.69□□□□□ -1.02
USP30-208ENST00000536393 CGNL1Q0VF96 1302 aa8.69□□□□□ -1.02
USP30-208ENST00000536393 MAPK8IP3Q9UPT6 1336 aa8.69□□□□□ -1.02
USP30-208ENST00000536393 CT47B1P0C2W7 299 aaPredicted RBP8.68□□□□□ -1.02
USP30-208ENST00000536393 PDE3AQ14432 1141 aa8.68□□□□□ -1.02
USP30-208ENST00000536393 SPDYE1Q8NFV5 336 aaPredicted RBP8.68□□□□□ -1.02
USP30-208ENST00000536393 KNSTRNQ9Y448 316 aa8.68□□□□□ -1.02
USP30-208ENST00000536393 KDM2BQ8NHM5 1336 aa8.68□□□□□ -1.02
USP30-208ENST00000536393 KANK1Q14678 1352 aa8.68□□□□□ -1.02
USP30-208ENST00000536393 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
USP30-208ENST00000536393 LMTK2Q8IWU2 1503 aa8.68□□□□□ -1.02
USP30-208ENST00000536393 USP32Q8NFA0 1604 aa8.68□□□□□ -1.02
USP30-208ENST00000536393 KDM5AP29375 1690 aaKnown RBP8.68□□□□□ -1.02
USP30-208ENST00000536393 E9PSI1 815 aa8.67□□□□□ -1.02
USP30-208ENST00000536393 NKTRP30414 1462 aaKnown RBP8.67□□□□□ -1.02
USP30-208ENST00000536393 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
USP30-208ENST00000536393 WDR43Q15061 677 aaKnown RBP eCLIP8.67□□□□□ -1.02
USP30-208ENST00000536393 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
USP30-208ENST00000536393 EFCAB2Q5VUJ9 269 aa8.67□□□□□ -1.02
USP30-208ENST00000536393 VIRMAQ69YN4 1812 aaKnown RBP8.67□□□□□ -1.02
USP30-208ENST00000536393 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
USP30-208ENST00000536393 DAXXQ9UER7 740 aaPredicted RBP8.67□□□□□ -1.02
USP30-208ENST00000536393 FANCAO15360 1455 aa8.66□□□□□ -1.02
USP30-208ENST00000536393 POLR3AO14802 1390 aaPredicted RBP8.66□□□□□ -1.02
USP30-208ENST00000536393 NSD2O96028 1365 aa8.66□□□□□ -1.02
USP30-208ENST00000536393 ZNF777Q9ULD5 760 aaPredicted RBP8.66□□□□□ -1.02
USP30-208ENST00000536393 PIP4P2Q8N4L2 257 aa8.65□□□□□ -1.02
USP30-208ENST00000536393 ISY1Q9ULR0 285 aaKnown RBP8.65□□□□□ -1.02
USP30-208ENST00000536393 CLEC11AQ9Y240 323 aa8.65□□□□□ -1.02
USP30-208ENST00000536393 NRXN1Q9ULB1 1477 aa8.64□□□□□ -1.03
USP30-208ENST00000536393 MAP3K4Q9Y6R4 1608 aa8.63□□□□□ -1.03
USP30-208ENST00000536393 BECN1Q14457 450 aa8.63□□□□□ -1.03
USP30-208ENST00000536393 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
USP30-208ENST00000536393 ZNF326Q5BKZ1 582 aaKnown RBP8.63□□□□□ -1.03
USP30-208ENST00000536393 AMER1Q5JTC6 1135 aaPredicted RBP8.63□□□□□ -1.03
USP30-208ENST00000536393 DUSP27Q5VZP5 1158 aa8.63□□□□□ -1.03
USP30-208ENST00000536393 EXOC6Q8TAG9 804 aa8.63□□□□□ -1.03
USP30-208ENST00000536393 ZFYVE16Q7Z3T8 1539 aa8.63□□□□□ -1.03
USP30-208ENST00000536393 DISP3Q9P2K9 1392 aa8.62□□□□□ -1.03
USP30-208ENST00000536393 RPGRIP1LQ68CZ1 1315 aa8.62□□□□□ -1.03
USP30-208ENST00000536393 INO80Q9ULG1 1556 aaPredicted RBP8.62□□□□□ -1.03
USP30-208ENST00000536393 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
USP30-208ENST00000536393 PMFBP1Q8TBY8 1022 aa8.62□□□□□ -1.03
USP30-208ENST00000536393 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
USP30-208ENST00000536393 PANK3Q9H999 370 aa8.62□□□□□ -1.03
USP30-208ENST00000536393 CFAP74Q9C0B2 1584 aa8.61□□□□□ -1.03
USP30-208ENST00000536393 SLFN5Q08AF3 891 aa8.61□□□□□ -1.03
USP30-208ENST00000536393 MYOM1P52179 1685 aa8.6□□□□□ -1.03
USP30-208ENST00000536393 KIF1BO60333 1816 aa8.6□□□□□ -1.03
USP30-208ENST00000536393 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms