RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 CFAP70Q5T0N1 1121 aa28.98■■■□□ 2.23
TRIM3-214ENST00000536344 NOP58Q9Y2X3 529 aaKnown RBP28.98■■■□□ 2.23
TRIM3-214ENST00000536344 PPP4R2Q9NY27 417 aa28.96■■■□□ 2.23
TRIM3-214ENST00000536344 FAM9BQ8IZU0 186 aa28.95■■■□□ 2.22
TRIM3-214ENST00000536344 ABCC3O15438 1527 aa28.94■■■□□ 2.22
TRIM3-214ENST00000536344 CCDC136Q96JN2 1154 aa28.93■■■□□ 2.22
TRIM3-214ENST00000536344 DISP3Q9P2K9 1392 aa28.93■■■□□ 2.22
TRIM3-214ENST00000536344 GPRASP1Q5JY77 1395 aa28.93■■■□□ 2.22
TRIM3-214ENST00000536344 TESK2Q96S53 571 aa28.93■■■□□ 2.22
TRIM3-214ENST00000536344 SENP3-EIF4A1A0A087X0R7 540 aa28.93■■■□□ 2.22
TRIM3-214ENST00000536344 MRS2Q9HD23 443 aa28.93■■■□□ 2.22
TRIM3-214ENST00000536344 MADDQ8WXG6 1647 aa28.92■■■□□ 2.22
TRIM3-214ENST00000536344 COL17A1Q9UMD9 1497 aaPredicted RBP28.91■■■□□ 2.22
TRIM3-214ENST00000536344 MROH2AA6NES4 1674 aa28.91■■■□□ 2.22
TRIM3-214ENST00000536344 FBXO31Q5XUX0 539 aaPredicted RBP28.9■■■□□ 2.22
TRIM3-214ENST00000536344 LMTK2Q8IWU2 1503 aa28.89■■■□□ 2.22
TRIM3-214ENST00000536344 KIF1BO60333 1816 aa28.88■■■□□ 2.21
TRIM3-214ENST00000536344 IL27Q8NEV9 243 aa28.87■■■□□ 2.21
TRIM3-214ENST00000536344 RTN4Q9NQC3 1192 aaKnown RBP28.87■■■□□ 2.21
TRIM3-214ENST00000536344 SIGLEC1Q9BZZ2 1709 aa28.86■■■□□ 2.21
TRIM3-214ENST00000536344 NOS1P29475 1434 aa28.86■■■□□ 2.21
TRIM3-214ENST00000536344 KIF13AQ9H1H9 1805 aa28.86■■■□□ 2.21
TRIM3-214ENST00000536344 CAMSAP1Q5T5Y3 1602 aa28.84■■■□□ 2.21
TRIM3-214ENST00000536344 IDI1Q13907 227 aa28.83■■■□□ 2.21
TRIM3-214ENST00000536344 ARID4BQ4LE39 1312 aaPredicted RBP28.82■■■□□ 2.2
TRIM3-214ENST00000536344 TMEM132EQ6IEE7 984 aa28.82■■■□□ 2.2
TRIM3-214ENST00000536344 TMF1P82094 1093 aa28.8■■■□□ 2.2
TRIM3-214ENST00000536344 PANK3Q9H999 370 aa28.76■■■□□ 2.19
TRIM3-214ENST00000536344 CC2D1BQ5T0F9 858 aaKnown RBP28.75■■■□□ 2.19
TRIM3-214ENST00000536344 TRAK1Q9UPV9 953 aa28.75■■■□□ 2.19
TRIM3-214ENST00000536344 SYNMO15061 1565 aa28.74■■■□□ 2.19
TRIM3-214ENST00000536344 ZMYM4Q5VZL5 1548 aa28.74■■■□□ 2.19
TRIM3-214ENST00000536344 ERICH6BQ5W0A0 696 aa28.73■■■□□ 2.19
TRIM3-214ENST00000536344 ADGRB3O60242 1522 aa28.73■■■□□ 2.19
TRIM3-214ENST00000536344 LAMC1P11047 1609 aa28.72■■■□□ 2.19
TRIM3-214ENST00000536344 SCAF11Q99590 1463 aaKnown RBP28.72■■■□□ 2.19
TRIM3-214ENST00000536344 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.71■■■□□ 2.19
TRIM3-214ENST00000536344 TRHP20396 242 aaPredicted RBP28.7■■■□□ 2.19
TRIM3-214ENST00000536344 STAC3Q96MF2 364 aa28.7■■■□□ 2.18
TRIM3-214ENST00000536344 IQGAP1P46940 1657 aa28.68■■■□□ 2.18
TRIM3-214ENST00000536344 PLPPR3Q6T4P5 718 aa28.67■■■□□ 2.18
TRIM3-214ENST00000536344 IFT172Q9UG01 1749 aa28.67■■■□□ 2.18
TRIM3-214ENST00000536344 MYOM2P54296 1465 aa28.66■■■□□ 2.18
TRIM3-214ENST00000536344 STAG3Q9UJ98 1225 aa28.66■■■□□ 2.18
TRIM3-214ENST00000536344 PER1O15534 1290 aaPredicted RBP28.65■■■□□ 2.18
TRIM3-214ENST00000536344 SAFB2Q14151 953 aaKnown RBP eCLIP28.65■■■□□ 2.18
TRIM3-214ENST00000536344 RTL5Q5HYW3 569 aaPredicted RBP28.64■■■□□ 2.18
TRIM3-214ENST00000536344 TMC1Q8TDI8 760 aa28.64■■■□□ 2.18
TRIM3-214ENST00000536344 STK26Q9P289 416 aa28.62■■■□□ 2.17
TRIM3-214ENST00000536344 MYO5BQ9ULV0 1848 aa28.62■■■□□ 2.17
TRIM3-214ENST00000536344 PPLO60437 1756 aa28.61■■■□□ 2.17
TRIM3-214ENST00000536344 ARHGAP31Q2M1Z3 1444 aa28.61■■■□□ 2.17
TRIM3-214ENST00000536344 IPO9Q96P70 1041 aaKnown RBP28.61■■■□□ 2.17
TRIM3-214ENST00000536344 C14orf93Q9H972 538 aaKnown RBP28.61■■■□□ 2.17
TRIM3-214ENST00000536344 SLC52A1Q9NWF4 448 aa28.6■■■□□ 2.17
TRIM3-214ENST00000536344 CLTCQ00610 1675 aaKnown RBP28.6■■■□□ 2.17
TRIM3-214ENST00000536344 ESF1Q9H501 851 aaKnown RBP28.59■■■□□ 2.17
TRIM3-214ENST00000536344 PREX1Q8TCU6 1659 aa28.59■■■□□ 2.17
TRIM3-214ENST00000536344 PIK3C2GO75747 1445 aa28.59■■■□□ 2.17
TRIM3-214ENST00000536344 EIF3AQ14152 1382 aaKnown RBP28.58■■■□□ 2.17
TRIM3-214ENST00000536344 NEURL4Q96JN8 1562 aa28.58■■■□□ 2.17
TRIM3-214ENST00000536344 ZC3H13Q5T200 1668 aaKnown RBP28.58■■■□□ 2.17
TRIM3-214ENST00000536344 VGFO15240 615 aaPredicted RBP28.57■■■□□ 2.16
TRIM3-214ENST00000536344 NRXN1Q9ULB1 1477 aa28.57■■■□□ 2.16
TRIM3-214ENST00000536344 PIK3C2BO00750 1634 aa28.57■■■□□ 2.16
TRIM3-214ENST00000536344 ZBTB47Q9UFB7 747 aaPredicted RBP28.56■■■□□ 2.16
TRIM3-214ENST00000536344 KTN1Q86UP2 1357 aaKnown RBP28.56■■■□□ 2.16
TRIM3-214ENST00000536344 ANP32AP39687 249 aaKnown RBP28.55■■■□□ 2.16
TRIM3-214ENST00000536344 RPGRIP1LQ68CZ1 1315 aa28.54■■■□□ 2.16
TRIM3-214ENST00000536344 MYBBP1AQ9BQG0 1328 aaKnown RBP28.53■■■□□ 2.16
TRIM3-214ENST00000536344 CENPJQ9HC77 1338 aaPredicted RBP28.53■■■□□ 2.16
TRIM3-214ENST00000536344 KIAA1210Q9ULL0 1709 aa28.53■■■□□ 2.16
TRIM3-214ENST00000536344 NEXMIFQ5QGS0 1516 aa28.53■■■□□ 2.16
TRIM3-214ENST00000536344 ERVK-7P63135 1459 aa28.52■■■□□ 2.16
TRIM3-214ENST00000536344 RALBP1Q15311 655 aa28.51■■■□□ 2.15
TRIM3-214ENST00000536344 ARHGEF40Q8TER5 1519 aa28.51■■■□□ 2.15
TRIM3-214ENST00000536344 PNISRQ8TF01 805 aaKnown RBP28.5■■■□□ 2.15
TRIM3-214ENST00000536344 KNSTRNQ9Y448 316 aa28.5■■■□□ 2.15
TRIM3-214ENST00000536344 CDCA8Q53HL2 280 aa28.48■■■□□ 2.15
TRIM3-214ENST00000536344 AGLP35573 1532 aa28.47■■■□□ 2.15
TRIM3-214ENST00000536344 CEBPAP49715 358 aaPredicted RBP28.47■■■□□ 2.15
TRIM3-214ENST00000536344 TMEM131LA2VDJ0 1609 aa28.46■■■□□ 2.15
TRIM3-214ENST00000536344 ZBED9Q6R2W3 1325 aa28.45■■■□□ 2.15
TRIM3-214ENST00000536344 ADGRB1O14514 1584 aa28.45■■■□□ 2.15
TRIM3-214ENST00000536344 PARD3Q8TEW0 1356 aa28.45■■■□□ 2.15
TRIM3-214ENST00000536344 ZMYM3Q14202 1370 aa28.45■■■□□ 2.14
TRIM3-214ENST00000536344 LAS1LQ9Y4W2 734 aaKnown RBP28.44■■■□□ 2.14
TRIM3-214ENST00000536344 REREQ9P2R6 1566 aa28.43■■■□□ 2.14
TRIM3-214ENST00000536344 NPM2Q86SE8 214 aaKnown RBP28.43■■■□□ 2.14
TRIM3-214ENST00000536344 SLC12A5Q9H2X9 1139 aa28.42■■■□□ 2.14
TRIM3-214ENST00000536344 NLRP13Q86W25 1043 aa28.42■■■□□ 2.14
TRIM3-214ENST00000536344 CARD14Q9BXL6 1004 aa28.4■■■□□ 2.14
TRIM3-214ENST00000536344 AMER1Q5JTC6 1135 aaPredicted RBP28.39■■■□□ 2.14
TRIM3-214ENST00000536344 PPP6R1Q9UPN7 881 aa28.38■■■□□ 2.13
TRIM3-214ENST00000536344 CABP2Q9NPB3 220 aa28.38■■■□□ 2.13
TRIM3-214ENST00000536344 KDM5AP29375 1690 aaKnown RBP28.37■■■□□ 2.13
TRIM3-214ENST00000536344 BRD4O60885 1362 aaPredicted RBP28.37■■■□□ 2.13
TRIM3-214ENST00000536344 MYOM1P52179 1685 aa28.37■■■□□ 2.13
TRIM3-214ENST00000536344 SETBP1Q9Y6X0 1596 aa28.37■■■□□ 2.13
TRIM3-214ENST00000536344 MINK1Q8N4C8 1332 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms