RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 DISP3Q9P2K9 1392 aa23.88■■□□□ 1.41
RAB40C-203ENST00000535977 ZMYM4Q5VZL5 1548 aa23.87■■□□□ 1.41
RAB40C-203ENST00000535977 SCAPERQ9BY12 1400 aa23.87■■□□□ 1.41
RAB40C-203ENST00000535977 VWDEQ8N2E2 1590 aa23.87■■□□□ 1.41
RAB40C-203ENST00000535977 MADDQ8WXG6 1647 aa23.86■■□□□ 1.41
RAB40C-203ENST00000535977 PDE3BQ13370 1112 aa23.86■■□□□ 1.41
RAB40C-203ENST00000535977 CDCA8Q53HL2 280 aa23.86■■□□□ 1.41
RAB40C-203ENST00000535977 SLC24A1O60721 1099 aa23.83■■□□□ 1.41
RAB40C-203ENST00000535977 NPM1P06748 294 aaKnown RBP eCLIP23.82■■□□□ 1.4
RAB40C-203ENST00000535977 PANK3Q9H999 370 aa23.82■■□□□ 1.4
RAB40C-203ENST00000535977 ADGRL1O94910 1474 aa23.82■■□□□ 1.4
RAB40C-203ENST00000535977 IQGAP1P46940 1657 aa23.81■■□□□ 1.4
RAB40C-203ENST00000535977 SCAF11Q99590 1463 aaKnown RBP23.8■■□□□ 1.4
RAB40C-203ENST00000535977 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
RAB40C-203ENST00000535977 KIAA1210Q9ULL0 1709 aa23.78■■□□□ 1.4
RAB40C-203ENST00000535977 ASXL2Q76L83 1435 aa23.77■■□□□ 1.4
RAB40C-203ENST00000535977 KIF3BO15066 747 aa23.77■■□□□ 1.4
RAB40C-203ENST00000535977 EIF3AQ14152 1382 aaKnown RBP23.77■■□□□ 1.4
RAB40C-203ENST00000535977 EIF5BO60841 1220 aaKnown RBP23.74■■□□□ 1.39
RAB40C-203ENST00000535977 NEFMP07197 916 aa23.73■■□□□ 1.39
RAB40C-203ENST00000535977 CC2D1BQ5T0F9 858 aaKnown RBP23.73■■□□□ 1.39
RAB40C-203ENST00000535977 KNSTRNQ9Y448 316 aa23.71■■□□□ 1.39
RAB40C-203ENST00000535977 MYOM2P54296 1465 aa23.71■■□□□ 1.39
RAB40C-203ENST00000535977 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
RAB40C-203ENST00000535977 SYNMO15061 1565 aa23.71■■□□□ 1.39
RAB40C-203ENST00000535977 ZNF518AQ6AHZ1 1483 aa23.7■■□□□ 1.39
RAB40C-203ENST00000535977 LAS1LQ9Y4W2 734 aaKnown RBP23.7■■□□□ 1.38
RAB40C-203ENST00000535977 LMTK2Q8IWU2 1503 aa23.7■■□□□ 1.38
RAB40C-203ENST00000535977 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.38
RAB40C-203ENST00000535977 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
RAB40C-203ENST00000535977 BRPF3Q9ULD4 1205 aa23.69■■□□□ 1.38
RAB40C-203ENST00000535977 NPC1L1Q9UHC9 1359 aa23.68■■□□□ 1.38
RAB40C-203ENST00000535977 CFAP74Q9C0B2 1584 aa23.68■■□□□ 1.38
RAB40C-203ENST00000535977 EFCAB6Q5THR3 1501 aa23.67■■□□□ 1.38
RAB40C-203ENST00000535977 RCAN3Q9UKA8 241 aa23.67■■□□□ 1.38
RAB40C-203ENST00000535977 KIDINS220Q9ULH0 1771 aa23.66■■□□□ 1.38
RAB40C-203ENST00000535977 KIF1BO60333 1816 aa23.66■■□□□ 1.38
RAB40C-203ENST00000535977 RRP1P56182 461 aaKnown RBP23.65■■□□□ 1.38
RAB40C-203ENST00000535977 MAP3K4Q9Y6R4 1608 aa23.65■■□□□ 1.38
RAB40C-203ENST00000535977 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
RAB40C-203ENST00000535977 ASXL1Q8IXJ9 1541 aa23.62■■□□□ 1.37
RAB40C-203ENST00000535977 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-203ENST00000535977 NPM2Q86SE8 214 aaKnown RBP23.61■■□□□ 1.37
RAB40C-203ENST00000535977 MLH3Q9UHC1 1453 aa23.6■■□□□ 1.37
RAB40C-203ENST00000535977 PPP2R1AP30153 589 aa23.59■■□□□ 1.37
RAB40C-203ENST00000535977 KDM5AP29375 1690 aaKnown RBP23.59■■□□□ 1.37
RAB40C-203ENST00000535977 NRXN1Q9ULB1 1477 aa23.58■■□□□ 1.37
RAB40C-203ENST00000535977 PIK3C2GO75747 1445 aa23.58■■□□□ 1.37
RAB40C-203ENST00000535977 IFT172Q9UG01 1749 aa23.58■■□□□ 1.37
RAB40C-203ENST00000535977 CD109Q6YHK3 1445 aa23.58■■□□□ 1.36
RAB40C-203ENST00000535977 PPRC1Q5VV67 1664 aaKnown RBP23.57■■□□□ 1.36
RAB40C-203ENST00000535977 POGZQ7Z3K3 1410 aa23.57■■□□□ 1.36
RAB40C-203ENST00000535977 SBNO2Q9Y2G9 1366 aa23.56■■□□□ 1.36
RAB40C-203ENST00000535977 SENP3-EIF4A1A0A087X0R7 540 aa23.56■■□□□ 1.36
RAB40C-203ENST00000535977 ABCA6Q8N139 1617 aa23.55■■□□□ 1.36
RAB40C-203ENST00000535977 WDR43Q15061 677 aaKnown RBP eCLIP23.55■■□□□ 1.36
RAB40C-203ENST00000535977 FAM69CQ0P6D2 419 aa23.55■■□□□ 1.36
RAB40C-203ENST00000535977 CFAP70Q5T0N1 1121 aa23.54■■□□□ 1.36
RAB40C-203ENST00000535977 PKNOX2Q96KN3 472 aa23.54■■□□□ 1.36
RAB40C-203ENST00000535977 MYOM1P52179 1685 aa23.54■■□□□ 1.36
RAB40C-203ENST00000535977 ADGRF5Q8IZF2 1346 aa23.53■■□□□ 1.36
RAB40C-203ENST00000535977 ADAMTS8Q9UP79 889 aa23.53■■□□□ 1.36
RAB40C-203ENST00000535977 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
RAB40C-203ENST00000535977 PPM1GO15355 546 aaPredicted RBP23.53■■□□□ 1.36
RAB40C-203ENST00000535977 ADGRB3O60242 1522 aa23.52■■□□□ 1.36
RAB40C-203ENST00000535977 RPGRIP1LQ68CZ1 1315 aa23.52■■□□□ 1.36
RAB40C-203ENST00000535977 MYO3AQ8NEV4 1616 aa23.52■■□□□ 1.36
RAB40C-203ENST00000535977 UGGT1Q9NYU2 1555 aa23.51■■□□□ 1.35
RAB40C-203ENST00000535977 HECW2Q9P2P5 1572 aa23.5■■□□□ 1.35
RAB40C-203ENST00000535977 GSE1Q14687 1217 aa23.5■■□□□ 1.35
RAB40C-203ENST00000535977 CDCA7LQ96GN5 454 aa23.5■■□□□ 1.35
RAB40C-203ENST00000535977 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
RAB40C-203ENST00000535977 MROH2AA6NES4 1674 aa23.47■■□□□ 1.35
RAB40C-203ENST00000535977 NEO1Q92859 1461 aa23.47■■□□□ 1.35
RAB40C-203ENST00000535977 EXOC6Q8TAG9 804 aa23.46■■□□□ 1.35
RAB40C-203ENST00000535977 NPATQ14207 1427 aa23.46■■□□□ 1.35
RAB40C-203ENST00000535977 NGEFQ8N5V2 710 aa23.46■■□□□ 1.35
RAB40C-203ENST00000535977 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.35
RAB40C-203ENST00000535977 NOS1P29475 1434 aa23.45■■□□□ 1.34
RAB40C-203ENST00000535977 C14orf93Q9H972 538 aaKnown RBP23.44■■□□□ 1.34
RAB40C-203ENST00000535977 CENPJQ9HC77 1338 aaPredicted RBP23.43■■□□□ 1.34
RAB40C-203ENST00000535977 RSPH6AQ9H0K4 717 aa23.43■■□□□ 1.34
RAB40C-203ENST00000535977 PPLO60437 1756 aa23.42■■□□□ 1.34
RAB40C-203ENST00000535977 ZNF521Q96K83 1311 aa23.41■■□□□ 1.34
RAB40C-203ENST00000535977 TCERG1O14776 1098 aaKnown RBP23.41■■□□□ 1.34
RAB40C-203ENST00000535977 GGT6Q6P531 493 aa23.41■■□□□ 1.34
RAB40C-203ENST00000535977 ABCC3O15438 1527 aa23.4■■□□□ 1.34
RAB40C-203ENST00000535977 PDE4AP27815 886 aa23.4■■□□□ 1.34
RAB40C-203ENST00000535977 GOLGA2Q08379 1002 aa23.4■■□□□ 1.34
RAB40C-203ENST00000535977 CHGAP10645 457 aaKnown RBP23.39■■□□□ 1.34
RAB40C-203ENST00000535977 FRAT1Q92837 279 aaPredicted RBP23.39■■□□□ 1.33
RAB40C-203ENST00000535977 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.33
RAB40C-203ENST00000535977 PLEKHH1Q9ULM0 1364 aa23.37■■□□□ 1.33
RAB40C-203ENST00000535977 DUSP27Q5VZP5 1158 aa23.37■■□□□ 1.33
RAB40C-203ENST00000535977 DIP2BQ9P265 1576 aa23.36■■□□□ 1.33
RAB40C-203ENST00000535977 MS4A1P11836 297 aa23.36■■□□□ 1.33
RAB40C-203ENST00000535977 CARD14Q9BXL6 1004 aa23.36■■□□□ 1.33
RAB40C-203ENST00000535977 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
RAB40C-203ENST00000535977 BACH2Q9BYV9 841 aa23.35■■□□□ 1.33
RAB40C-203ENST00000535977 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms