RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
TNC-210ENST00000535648 TRIM29Q14134 588 aa11.65□□□□□ -0.54
TNC-210ENST00000535648 CPLX2Q6PUV4 134 aaKnown RBP11.65□□□□□ -0.54
TNC-210ENST00000535648 REC8O95072 547 aa11.65□□□□□ -0.54
TNC-210ENST00000535648 RRP1P56182 461 aaKnown RBP11.65□□□□□ -0.54
TNC-210ENST00000535648 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
TNC-210ENST00000535648 MCTP1Q6DN14 999 aa11.64□□□□□ -0.55
TNC-210ENST00000535648 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
TNC-210ENST00000535648 HOOK1Q9UJC3 728 aaKnown RBP11.64□□□□□ -0.55
TNC-210ENST00000535648 PDE4AP27815 886 aa11.64□□□□□ -0.55
TNC-210ENST00000535648 EVA1CP58658 441 aa11.64□□□□□ -0.55
TNC-210ENST00000535648 MTERF4Q7Z6M4 381 aaKnown RBP11.63□□□□□ -0.55
TNC-210ENST00000535648 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 CCAR2Q8N163 923 aaKnown RBP11.63□□□□□ -0.55
TNC-210ENST00000535648 CCDC47Q96A33 483 aaKnown RBP11.63□□□□□ -0.55
TNC-210ENST00000535648 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 TEFQ10587 303 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 NUTM2FA1L443 756 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
TNC-210ENST00000535648 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
TNC-210ENST00000535648 C9orf78Q9NZ63 289 aaPredicted RBP11.63□□□□□ -0.55
TNC-210ENST00000535648 TTC5Q8N0Z6 440 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 ANKRD20A12PQ8NF67 263 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 DDX19BQ9UMR2 479 aa11.63□□□□□ -0.55
TNC-210ENST00000535648 FAM43AQ8N2R8 423 aa11.62□□□□□ -0.55
TNC-210ENST00000535648 CRBNQ96SW2 442 aa11.62□□□□□ -0.55
TNC-210ENST00000535648 USP47Q96K76 1375 aa11.62□□□□□ -0.55
TNC-210ENST00000535648 BCL2L13Q9BXK5 485 aa11.61□□□□□ -0.55
TNC-210ENST00000535648 IPO7O95373 1038 aaKnown RBP11.61□□□□□ -0.55
TNC-210ENST00000535648 ANO2Q9NQ90 1003 aa11.61□□□□□ -0.55
TNC-210ENST00000535648 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
TNC-210ENST00000535648 NGEFQ8N5V2 710 aa11.6□□□□□ -0.55
TNC-210ENST00000535648 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
TNC-210ENST00000535648 ELL2O00472 640 aaPredicted RBP11.6□□□□□ -0.55
TNC-210ENST00000535648 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
TNC-210ENST00000535648 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
TNC-210ENST00000535648 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
TNC-210ENST00000535648 DDX58O95786 925 aaKnown RBP11.6□□□□□ -0.55
TNC-210ENST00000535648 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
TNC-210ENST00000535648 CTDP1Q9Y5B0 961 aaPredicted RBP11.6□□□□□ -0.55
TNC-210ENST00000535648 PLIN1O60240 522 aa11.59□□□□□ -0.55
TNC-210ENST00000535648 TRDNQ13061 729 aa11.59□□□□□ -0.55
TNC-210ENST00000535648 CPLX1O14810 134 aa11.58□□□□□ -0.55
TNC-210ENST00000535648 APPP05067 770 aa11.58□□□□□ -0.56
TNC-210ENST00000535648 API5Q9BZZ5 524 aaKnown RBP11.58□□□□□ -0.56
TNC-210ENST00000535648 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
TNC-210ENST00000535648 EXOC6Q8TAG9 804 aa11.58□□□□□ -0.56
TNC-210ENST00000535648 MEX3CQ5U5Q3 659 aaKnown RBP11.58□□□□□ -0.56
TNC-210ENST00000535648 VPS37DQ86XT2 251 aa11.58□□□□□ -0.56
TNC-210ENST00000535648 UBE2Q2Q8WVN8 375 aa11.58□□□□□ -0.56
TNC-210ENST00000535648 DIAPH1O60610 1272 aaKnown RBP11.57□□□□□ -0.56
TNC-210ENST00000535648 EIF2S2P20042 333 aaKnown RBP11.57□□□□□ -0.56
TNC-210ENST00000535648 ZNF592Q92610 1267 aa11.57□□□□□ -0.56
TNC-210ENST00000535648 ERICH2A1L162 156 aa11.57□□□□□ -0.56
TNC-210ENST00000535648 PRKRIP1Q9H875 184 aaPredicted RBP11.57□□□□□ -0.56
TNC-210ENST00000535648 TEX35Q5T0J7 233 aa11.56□□□□□ -0.56
TNC-210ENST00000535648 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
TNC-210ENST00000535648 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
TNC-210ENST00000535648 DZIP1LQ8IYY4 767 aaKnown RBP11.56□□□□□ -0.56
TNC-210ENST00000535648 JPH4Q96JJ6 628 aa11.56□□□□□ -0.56
TNC-210ENST00000535648 CUX1P39880 1505 aa11.56□□□□□ -0.56
TNC-210ENST00000535648 BICD2Q8TD16 824 aa11.56□□□□□ -0.56
TNC-210ENST00000535648 RAD21O60216 631 aa11.56□□□□□ -0.56
TNC-210ENST00000535648 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
TNC-210ENST00000535648 RRP9O43818 475 aaKnown RBP11.55□□□□□ -0.56
TNC-210ENST00000535648 NFXL1Q6ZNB6 911 aa11.55□□□□□ -0.56
TNC-210ENST00000535648 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
TNC-210ENST00000535648 RIPK4P57078 832 aa11.55□□□□□ -0.56
TNC-210ENST00000535648 SASS6Q6UVJ0 657 aa11.55□□□□□ -0.56
TNC-210ENST00000535648 CHMP5Q9NZZ3 219 aa11.55□□□□□ -0.56
TNC-210ENST00000535648 MINK1Q8N4C8 1332 aaPredicted RBP11.55□□□□□ -0.56
TNC-210ENST00000535648 ZNF771Q7L3S4 317 aaPredicted RBP11.55□□□□□ -0.56
TNC-210ENST00000535648 HOMER1Q86YM7 354 aa11.55□□□□□ -0.56
TNC-210ENST00000535648 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
TNC-210ENST00000535648 ERC2O15083 957 aa11.54□□□□□ -0.56
TNC-210ENST00000535648 NUCB2P80303 420 aa11.54□□□□□ -0.56
TNC-210ENST00000535648 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
TNC-210ENST00000535648 APAF1O14727 1248 aa11.54□□□□□ -0.56
TNC-210ENST00000535648 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
TNC-210ENST00000535648 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
TNC-210ENST00000535648 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
TNC-210ENST00000535648 SAFBQ15424 915 aaKnown RBP eCLIP11.53□□□□□ -0.56
TNC-210ENST00000535648 PSME1Q06323 249 aa11.53□□□□□ -0.56
TNC-210ENST00000535648 AAMPQ13685 434 aa11.53□□□□□ -0.56
TNC-210ENST00000535648 MIA2Q96PC5 1412 aa11.52□□□□□ -0.56
TNC-210ENST00000535648 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
TNC-210ENST00000535648 NINLQ9Y2I6 1382 aa11.52□□□□□ -0.57
TNC-210ENST00000535648 NFKBIBQ15653 356 aa11.52□□□□□ -0.57
TNC-210ENST00000535648 CCDC43Q96MW1 224 aaKnown RBP11.52□□□□□ -0.57
TNC-210ENST00000535648 SMARCA4P51532 1647 aa11.52□□□□□ -0.57
TNC-210ENST00000535648 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
TNC-210ENST00000535648 GNAI1P63096 354 aa11.51□□□□□ -0.57
TNC-210ENST00000535648 AK7Q96M32 723 aa11.51□□□□□ -0.57
TNC-210ENST00000535648 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
TNC-210ENST00000535648 RUFY1Q96T51 708 aa11.51□□□□□ -0.57
TNC-210ENST00000535648 VPS37CA5D8V6 355 aaPredicted RBP11.5□□□□□ -0.57
TNC-210ENST00000535648 CDR1P51861 262 aa11.5□□□□□ -0.57
TNC-210ENST00000535648 CCDC73Q6ZRK6 1079 aa11.5□□□□□ -0.57
TNC-210ENST00000535648 NAT10Q9H0A0 1025 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms