RNA–Protein interactions for RNA: ENST00000535260.5

TM7SF3-203, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 3

Gene TM7SF3, Length 883 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-203ENST00000535260 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
TM7SF3-203ENST00000535260 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
TM7SF3-203ENST00000535260 MED14O60244 1454 aa13.34□□□□□ -0.27
TM7SF3-203ENST00000535260 NPHP4O75161 1426 aaPredicted RBP13.33□□□□□ -0.28
TM7SF3-203ENST00000535260 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
TM7SF3-203ENST00000535260 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
TM7SF3-203ENST00000535260 TRPM2O94759 1503 aa13.32□□□□□ -0.28
TM7SF3-203ENST00000535260 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
TM7SF3-203ENST00000535260 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
TM7SF3-203ENST00000535260 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
TM7SF3-203ENST00000535260 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
TM7SF3-203ENST00000535260 EID1Q9Y6B2 187 aa13.29□□□□□ -0.28
TM7SF3-203ENST00000535260 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
TM7SF3-203ENST00000535260 RIMS2Q9UQ26 1411 aa13.29□□□□□ -0.28
TM7SF3-203ENST00000535260 CLTCL1P53675 1640 aa13.28□□□□□ -0.28
TM7SF3-203ENST00000535260 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
TM7SF3-203ENST00000535260 NUTM2DQ5VT03 806 aaPredicted RBP13.26□□□□□ -0.29
TM7SF3-203ENST00000535260 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
TM7SF3-203ENST00000535260 HSPA1LP34931 641 aa13.25□□□□□ -0.29
TM7SF3-203ENST00000535260 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
TM7SF3-203ENST00000535260 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
TM7SF3-203ENST00000535260 ANKRD30BQ9BXX2 1392 aa13.23□□□□□ -0.29
TM7SF3-203ENST00000535260 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
TM7SF3-203ENST00000535260 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.23□□□□□ -0.29
TM7SF3-203ENST00000535260 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
TM7SF3-203ENST00000535260 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
TM7SF3-203ENST00000535260 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
TM7SF3-203ENST00000535260 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
TM7SF3-203ENST00000535260 TOM1O60784 492 aa13.22□□□□□ -0.29
TM7SF3-203ENST00000535260 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
TM7SF3-203ENST00000535260 CPS1P31327 1500 aa13.22□□□□□ -0.29
TM7SF3-203ENST00000535260 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
TM7SF3-203ENST00000535260 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
TM7SF3-203ENST00000535260 ZNF326Q5BKZ1 582 aaKnown RBP13.21□□□□□ -0.29
TM7SF3-203ENST00000535260 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
TM7SF3-203ENST00000535260 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
TM7SF3-203ENST00000535260 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
TM7SF3-203ENST00000535260 RPGRIP1LQ68CZ1 1315 aa13.18□□□□□ -0.3
TM7SF3-203ENST00000535260 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
TM7SF3-203ENST00000535260 KCNA6P17658 529 aa13.17□□□□□ -0.3
TM7SF3-203ENST00000535260 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
TM7SF3-203ENST00000535260 BCANQ96GW7 911 aa13.17□□□□□ -0.3
TM7SF3-203ENST00000535260 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
TM7SF3-203ENST00000535260 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
TM7SF3-203ENST00000535260 LRRC7Q96NW7 1537 aa13.15□□□□□ -0.3
TM7SF3-203ENST00000535260 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
TM7SF3-203ENST00000535260 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
TM7SF3-203ENST00000535260 PTPRUQ92729 1446 aa13.14□□□□□ -0.31
TM7SF3-203ENST00000535260 NRXN3Q9Y4C0 1643 aa13.14□□□□□ -0.31
TM7SF3-203ENST00000535260 KIF1BO60333 1816 aa13.14□□□□□ -0.31
TM7SF3-203ENST00000535260 METP08581 1390 aa13.14□□□□□ -0.31
TM7SF3-203ENST00000535260 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
TM7SF3-203ENST00000535260 DHX57Q6P158 1386 aaKnown RBP13.13□□□□□ -0.31
TM7SF3-203ENST00000535260 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
TM7SF3-203ENST00000535260 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
TM7SF3-203ENST00000535260 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
TM7SF3-203ENST00000535260 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
TM7SF3-203ENST00000535260 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
TM7SF3-203ENST00000535260 PPLO60437 1756 aa13.09□□□□□ -0.31
TM7SF3-203ENST00000535260 TMEM94Q12767 1356 aa13.09□□□□□ -0.31
TM7SF3-203ENST00000535260 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
TM7SF3-203ENST00000535260 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
TM7SF3-203ENST00000535260 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
TM7SF3-203ENST00000535260 NRXN1Q9ULB1 1477 aa13.09□□□□□ -0.31
TM7SF3-203ENST00000535260 PIK3C2GO75747 1445 aa13.08□□□□□ -0.32
TM7SF3-203ENST00000535260 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
TM7SF3-203ENST00000535260 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
TM7SF3-203ENST00000535260 MYOM2P54296 1465 aa13.07□□□□□ -0.32
TM7SF3-203ENST00000535260 IFT172Q9UG01 1749 aa13.07□□□□□ -0.32
TM7SF3-203ENST00000535260 C14orf93Q9H972 538 aaKnown RBP13.06□□□□□ -0.32
TM7SF3-203ENST00000535260 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
TM7SF3-203ENST00000535260 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
TM7SF3-203ENST00000535260 SETD1AO15047 1707 aaKnown RBP13.05□□□□□ -0.32
TM7SF3-203ENST00000535260 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
TM7SF3-203ENST00000535260 KDM2AQ9Y2K7 1162 aa13.04□□□□□ -0.32
TM7SF3-203ENST00000535260 XRN1Q8IZH2 1706 aaKnown RBP13.04□□□□□ -0.32
TM7SF3-203ENST00000535260 PRAG1Q86YV5 1406 aa13.04□□□□□ -0.32
TM7SF3-203ENST00000535260 ASXL1Q8IXJ9 1541 aa13.03□□□□□ -0.32
TM7SF3-203ENST00000535260 TMEM132EQ6IEE7 984 aa13.03□□□□□ -0.32
TM7SF3-203ENST00000535260 XIRP1Q702N8 1843 aaKnown RBP13.03□□□□□ -0.32
TM7SF3-203ENST00000535260 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
TM7SF3-203ENST00000535260 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
TM7SF3-203ENST00000535260 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
TM7SF3-203ENST00000535260 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
TM7SF3-203ENST00000535260 LRPPRCP42704 1394 aaKnown RBP13.01□□□□□ -0.33
TM7SF3-203ENST00000535260 PTCH1Q13635 1447 aa13□□□□□ -0.33
TM7SF3-203ENST00000535260 NEUROD1Q13562 356 aa13□□□□□ -0.33
TM7SF3-203ENST00000535260 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
TM7SF3-203ENST00000535260 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
TM7SF3-203ENST00000535260 STK26Q9P289 416 aa12.99□□□□□ -0.33
TM7SF3-203ENST00000535260 TECPR2O15040 1411 aa12.98□□□□□ -0.33
TM7SF3-203ENST00000535260 MSH6P52701 1360 aa12.98□□□□□ -0.33
TM7SF3-203ENST00000535260 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
TM7SF3-203ENST00000535260 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
TM7SF3-203ENST00000535260 YTHDC2Q9H6S0 1430 aaKnown RBP12.97□□□□□ -0.33
TM7SF3-203ENST00000535260 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
TM7SF3-203ENST00000535260 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
TM7SF3-203ENST00000535260 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
TM7SF3-203ENST00000535260 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
TM7SF3-203ENST00000535260 SLAIN2Q9P270 581 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms