RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
GOPC-203ENST00000535237 TPM4P67936 248 aa18.41■□□□□ 0.54
GOPC-203ENST00000535237 REC8O95072 547 aa18.41■□□□□ 0.54
GOPC-203ENST00000535237 KIF3BO15066 747 aa18.4■□□□□ 0.54
GOPC-203ENST00000535237 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.54
GOPC-203ENST00000535237 SKAP1Q86WV1 359 aa18.39■□□□□ 0.53
GOPC-203ENST00000535237 CHMP3Q9Y3E7 222 aa18.39■□□□□ 0.53
GOPC-203ENST00000535237 ESPNB1AK53 854 aa18.39■□□□□ 0.53
GOPC-203ENST00000535237 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
GOPC-203ENST00000535237 GOLGA6L19H0YKK7 550 aa18.39■□□□□ 0.53
GOPC-203ENST00000535237 CAVIN1Q6NZI2 390 aaKnown RBP18.39■□□□□ 0.53
GOPC-203ENST00000535237 BECN2A8MW95 431 aa18.38■□□□□ 0.53
GOPC-203ENST00000535237 PDZRN3Q9UPQ7 1066 aa18.38■□□□□ 0.53
GOPC-203ENST00000535237 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
GOPC-203ENST00000535237 MTERF4Q7Z6M4 381 aaKnown RBP18.37■□□□□ 0.53
GOPC-203ENST00000535237 SPAG9O60271 1321 aaKnown RBP18.37■□□□□ 0.53
GOPC-203ENST00000535237 LRRC9Q6ZRR7 1453 aa18.37■□□□□ 0.53
GOPC-203ENST00000535237 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
GOPC-203ENST00000535237 GRPEL1Q9HAV7 217 aa18.36■□□□□ 0.53
GOPC-203ENST00000535237 LMOD3Q0VAK6 560 aa18.36■□□□□ 0.53
GOPC-203ENST00000535237 RRP9O43818 475 aaKnown RBP18.36■□□□□ 0.53
GOPC-203ENST00000535237 BCAR3O75815 825 aa18.35■□□□□ 0.53
GOPC-203ENST00000535237 GOLGA6L1Q8N7Z2 621 aa18.35■□□□□ 0.53
GOPC-203ENST00000535237 BICRAQ9NZM4 1560 aa18.35■□□□□ 0.53
GOPC-203ENST00000535237 MCM4P33991 863 aa18.35■□□□□ 0.53
GOPC-203ENST00000535237 ZNF644Q9H582 1327 aaPredicted RBP18.35■□□□□ 0.53
GOPC-203ENST00000535237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
GOPC-203ENST00000535237 AAMPQ13685 434 aa18.34■□□□□ 0.53
GOPC-203ENST00000535237 RUNDC1Q96C34 613 aa18.34■□□□□ 0.53
GOPC-203ENST00000535237 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
GOPC-203ENST00000535237 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
GOPC-203ENST00000535237 SF3A1Q15459 793 aaKnown RBP18.33■□□□□ 0.53
GOPC-203ENST00000535237 ANO2Q9NQ90 1003 aa18.33■□□□□ 0.53
GOPC-203ENST00000535237 CFTRP13569 1480 aa18.33■□□□□ 0.53
GOPC-203ENST00000535237 CCAR2Q8N163 923 aaKnown RBP18.33■□□□□ 0.52
GOPC-203ENST00000535237 GPATCH3Q96I76 525 aa18.33■□□□□ 0.52
GOPC-203ENST00000535237 CCDC39Q9UFE4 941 aa18.33■□□□□ 0.52
GOPC-203ENST00000535237 CCDC173Q0VFZ6 552 aa18.32■□□□□ 0.52
GOPC-203ENST00000535237 IGF1RP08069 1367 aa18.32■□□□□ 0.52
GOPC-203ENST00000535237 BCL11BQ9C0K0 894 aaPredicted RBP18.31■□□□□ 0.52
GOPC-203ENST00000535237 MYOM3Q5VTT5 1437 aa18.31■□□□□ 0.52
GOPC-203ENST00000535237 RIPK4P57078 832 aa18.31■□□□□ 0.52
GOPC-203ENST00000535237 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
GOPC-203ENST00000535237 PDE3AQ14432 1141 aa18.31■□□□□ 0.52
GOPC-203ENST00000535237 WASHC2CQ9Y4E1 1318 aa18.3■□□□□ 0.52
GOPC-203ENST00000535237 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
GOPC-203ENST00000535237 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
GOPC-203ENST00000535237 IFT57Q9NWB7 429 aa18.3■□□□□ 0.52
GOPC-203ENST00000535237 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
GOPC-203ENST00000535237 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
GOPC-203ENST00000535237 H3BQV1 296 aa18.29■□□□□ 0.52
GOPC-203ENST00000535237 IFFO2Q5TF58 517 aa18.29■□□□□ 0.52
GOPC-203ENST00000535237 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
GOPC-203ENST00000535237 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
GOPC-203ENST00000535237 TCP11L2Q8N4U5 519 aa18.27■□□□□ 0.52
GOPC-203ENST00000535237 VPS37CA5D8V6 355 aaPredicted RBP18.27■□□□□ 0.52
GOPC-203ENST00000535237 PPP2R1AP30153 589 aa18.27■□□□□ 0.52
GOPC-203ENST00000535237 MPNDQ8N594 471 aa18.27■□□□□ 0.52
GOPC-203ENST00000535237 KIF3AQ9Y496 699 aa18.27■□□□□ 0.52
GOPC-203ENST00000535237 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.51
GOPC-203ENST00000535237 CDC45O75419 566 aa18.26■□□□□ 0.51
GOPC-203ENST00000535237 EID1Q9Y6B2 187 aa18.26■□□□□ 0.51
GOPC-203ENST00000535237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.26■□□□□ 0.51
GOPC-203ENST00000535237 FAM184AQ8NB25 1140 aa18.26■□□□□ 0.51
GOPC-203ENST00000535237 CREBRFQ8IUR6 639 aa18.26■□□□□ 0.51
GOPC-203ENST00000535237 C11orf95C9JLR9 678 aaPredicted RBP18.25■□□□□ 0.51
GOPC-203ENST00000535237 BICD2Q8TD16 824 aa18.25■□□□□ 0.51
GOPC-203ENST00000535237 MIA2Q96PC5 1412 aa18.24■□□□□ 0.51
GOPC-203ENST00000535237 HMGN5P82970 282 aaKnown RBP18.24■□□□□ 0.51
GOPC-203ENST00000535237 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
GOPC-203ENST00000535237 MBD3O95983 291 aa18.23■□□□□ 0.51
GOPC-203ENST00000535237 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
GOPC-203ENST00000535237 HDAC5Q9UQL6 1122 aa18.23■□□□□ 0.51
GOPC-203ENST00000535237 CCDC34Q96HJ3 373 aa18.23■□□□□ 0.51
GOPC-203ENST00000535237 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
GOPC-203ENST00000535237 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
GOPC-203ENST00000535237 TPM3P06753 285 aa18.22■□□□□ 0.51
GOPC-203ENST00000535237 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
GOPC-203ENST00000535237 UBE2Q2Q8WVN8 375 aa18.22■□□□□ 0.51
GOPC-203ENST00000535237 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
GOPC-203ENST00000535237 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
GOPC-203ENST00000535237 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
GOPC-203ENST00000535237 TEX35Q5T0J7 233 aa18.21■□□□□ 0.51
GOPC-203ENST00000535237 UQCRHLA0A096LP55 91 aa18.21■□□□□ 0.51
GOPC-203ENST00000535237 UQCRHP07919 91 aa18.21■□□□□ 0.51
GOPC-203ENST00000535237 NEK4P51957 841 aa18.21■□□□□ 0.51
GOPC-203ENST00000535237 NOC3LQ8WTT2 800 aaKnown RBP18.21■□□□□ 0.51
GOPC-203ENST00000535237 GORABQ5T7V8 394 aa18.2■□□□□ 0.5
GOPC-203ENST00000535237 GPS2Q13227 327 aa18.19■□□□□ 0.5
GOPC-203ENST00000535237 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
GOPC-203ENST00000535237 MTHFSP49914 203 aa18.19■□□□□ 0.5
GOPC-203ENST00000535237 SASS6Q6UVJ0 657 aa18.19■□□□□ 0.5
GOPC-203ENST00000535237 ZSCAN30Q86W11 494 aa18.19■□□□□ 0.5
GOPC-203ENST00000535237 EVC2Q86UK5 1308 aa18.19■□□□□ 0.5
GOPC-203ENST00000535237 TSPY26PQ9H489 355 aa18.18■□□□□ 0.5
GOPC-203ENST00000535237 EXOSC9Q06265 439 aaKnown RBP18.18■□□□□ 0.5
GOPC-203ENST00000535237 RABEP1Q15276 862 aa18.18■□□□□ 0.5
GOPC-203ENST00000535237 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
GOPC-203ENST00000535237 RUFY2Q8WXA3 655 aa18.17■□□□□ 0.5
GOPC-203ENST00000535237 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms