RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 NPHP4O75161 1426 aaPredicted RBP30.21■■■□□ 2.43
CHFR-209ENST00000535181 IQGAP1P46940 1657 aa30.2■■■□□ 2.43
CHFR-209ENST00000535181 HDGFP51858 240 aaKnown RBP30.19■■■□□ 2.42
CHFR-209ENST00000535181 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.17■■■□□ 2.42
CHFR-209ENST00000535181 SPATA31E1Q6ZUB1 1445 aa30.16■■■□□ 2.42
CHFR-209ENST00000535181 PCGF6Q9BYE7 350 aa30.15■■■□□ 2.42
CHFR-209ENST00000535181 NEXMIFQ5QGS0 1516 aa30.14■■■□□ 2.42
CHFR-209ENST00000535181 DHX57Q6P158 1386 aaKnown RBP30.13■■■□□ 2.41
CHFR-209ENST00000535181 RPGRIP1LQ68CZ1 1315 aa30.12■■■□□ 2.41
CHFR-209ENST00000535181 PLEKHG1Q9ULL1 1385 aa30.12■■■□□ 2.41
CHFR-209ENST00000535181 ZNF326Q5BKZ1 582 aaKnown RBP30.11■■■□□ 2.41
CHFR-209ENST00000535181 PPP1R15AO75807 674 aaPredicted RBP30.07■■■□□ 2.4
CHFR-209ENST00000535181 PPLO60437 1756 aa30.07■■■□□ 2.4
CHFR-209ENST00000535181 IFT172Q9UG01 1749 aa30.05■■■□□ 2.4
CHFR-209ENST00000535181 DIP2AQ14689 1571 aa30.02■■■□□ 2.4
CHFR-209ENST00000535181 SETBP1Q9Y6X0 1596 aa30.02■■■□□ 2.4
CHFR-209ENST00000535181 VGFO15240 615 aaPredicted RBP29.99■■■□□ 2.39
CHFR-209ENST00000535181 NUTM2DQ5VT03 806 aaPredicted RBP29.99■■■□□ 2.39
CHFR-209ENST00000535181 LTBP4Q8N2S1 1624 aa29.98■■■□□ 2.39
CHFR-209ENST00000535181 NRXN3Q9Y4C0 1643 aa29.98■■■□□ 2.39
CHFR-209ENST00000535181 ADAMTS13Q76LX8 1427 aa29.97■■■□□ 2.39
CHFR-209ENST00000535181 RGL3Q3MIN7 710 aa29.97■■■□□ 2.39
CHFR-209ENST00000535181 ZNF335Q9H4Z2 1342 aaPredicted RBP29.95■■■□□ 2.38
CHFR-209ENST00000535181 MYOM2P54296 1465 aa29.94■■■□□ 2.38
CHFR-209ENST00000535181 TBX22Q9Y458 520 aa29.94■■■□□ 2.38
CHFR-209ENST00000535181 BCANQ96GW7 911 aa29.93■■■□□ 2.38
CHFR-209ENST00000535181 SLC26A8Q96RN1 970 aa29.92■■■□□ 2.38
CHFR-209ENST00000535181 CPS1P31327 1500 aa29.91■■■□□ 2.38
CHFR-209ENST00000535181 PIK3R4Q99570 1358 aa29.9■■■□□ 2.38
CHFR-209ENST00000535181 NRXN1Q9ULB1 1477 aa29.9■■■□□ 2.38
CHFR-209ENST00000535181 STAC3Q96MF2 364 aa29.89■■■□□ 2.38
CHFR-209ENST00000535181 NWD1Q149M9 1564 aa29.89■■■□□ 2.38
CHFR-209ENST00000535181 STRCP1A6NGW2 1772 aa29.87■■■□□ 2.37
CHFR-209ENST00000535181 ADGRF5Q8IZF2 1346 aa29.86■■■□□ 2.37
CHFR-209ENST00000535181 PIK3C2GO75747 1445 aa29.86■■■□□ 2.37
CHFR-209ENST00000535181 SETD1AO15047 1707 aaKnown RBP29.85■■■□□ 2.37
CHFR-209ENST00000535181 CHD2O14647 1828 aaKnown RBP29.85■■■□□ 2.37
CHFR-209ENST00000535181 ALKQ9UM73 1620 aa29.84■■■□□ 2.37
CHFR-209ENST00000535181 KCNA6P17658 529 aa29.83■■■□□ 2.37
CHFR-209ENST00000535181 IQSEC2Q5JU85 1478 aa29.82■■■□□ 2.36
CHFR-209ENST00000535181 SIN3AQ96ST3 1273 aa29.82■■■□□ 2.36
CHFR-209ENST00000535181 NKTRP30414 1462 aaKnown RBP29.81■■■□□ 2.36
CHFR-209ENST00000535181 SENP3Q9H4L4 574 aaPredicted RBP29.81■■■□□ 2.36
CHFR-209ENST00000535181 LAMC1P11047 1609 aa29.79■■■□□ 2.36
CHFR-209ENST00000535181 CLSPNQ9HAW4 1339 aa29.79■■■□□ 2.36
CHFR-209ENST00000535181 CERKQ8TCT0 537 aa29.79■■■□□ 2.36
CHFR-209ENST00000535181 DCAF11Q8TEB1 546 aa29.79■■■□□ 2.36
CHFR-209ENST00000535181 METP08581 1390 aa29.77■■■□□ 2.36
CHFR-209ENST00000535181 XRN1Q8IZH2 1706 aaKnown RBP29.76■■■□□ 2.35
CHFR-209ENST00000535181 LRRC7Q96NW7 1537 aa29.76■■■□□ 2.35
CHFR-209ENST00000535181 PTPRUQ92729 1446 aa29.75■■■□□ 2.35
CHFR-209ENST00000535181 PRAG1Q86YV5 1406 aa29.73■■■□□ 2.35
CHFR-209ENST00000535181 NEUROD1Q13562 356 aa29.73■■■□□ 2.35
CHFR-209ENST00000535181 C14orf93Q9H972 538 aaKnown RBP29.72■■■□□ 2.35
CHFR-209ENST00000535181 KDM2AQ9Y2K7 1162 aa29.7■■■□□ 2.35
CHFR-209ENST00000535181 L3MBTL2Q969R5 705 aa29.69■■■□□ 2.34
CHFR-209ENST00000535181 ASXL1Q8IXJ9 1541 aa29.69■■■□□ 2.34
CHFR-209ENST00000535181 AMOTL2Q9Y2J4 779 aa29.68■■■□□ 2.34
CHFR-209ENST00000535181 XIRP1Q702N8 1843 aaKnown RBP29.66■■■□□ 2.34
CHFR-209ENST00000535181 KIAA1210Q9ULL0 1709 aa29.65■■■□□ 2.34
CHFR-209ENST00000535181 PTCH1Q13635 1447 aa29.65■■■□□ 2.34
CHFR-209ENST00000535181 NCOA3Q9Y6Q9 1424 aa29.65■■■□□ 2.34
CHFR-209ENST00000535181 CFAP70Q5T0N1 1121 aa29.64■■■□□ 2.34
CHFR-209ENST00000535181 TMEM94Q12767 1356 aa29.64■■■□□ 2.33
CHFR-209ENST00000535181 TONSLQ96HA7 1378 aa29.64■■■□□ 2.33
CHFR-209ENST00000535181 TECPR2O15040 1411 aa29.62■■■□□ 2.33
CHFR-209ENST00000535181 KNDC1Q76NI1 1749 aa29.62■■■□□ 2.33
CHFR-209ENST00000535181 ADGRB1O14514 1584 aa29.62■■■□□ 2.33
CHFR-209ENST00000535181 PROSER2Q86WR7 435 aaPredicted RBP29.62■■■□□ 2.33
CHFR-209ENST00000535181 LRPPRCP42704 1394 aaKnown RBP29.62■■■□□ 2.33
CHFR-209ENST00000535181 CCER1Q8TC90 406 aaPredicted RBP29.6■■■□□ 2.33
CHFR-209ENST00000535181 ABCC11Q96J66 1382 aa29.59■■■□□ 2.33
CHFR-209ENST00000535181 YTHDC2Q9H6S0 1430 aaKnown RBP29.59■■■□□ 2.33
CHFR-209ENST00000535181 TMEM132EQ6IEE7 984 aa29.56■■■□□ 2.32
CHFR-209ENST00000535181 ROBO2Q9HCK4 1378 aa29.54■■■□□ 2.32
CHFR-209ENST00000535181 TIMELESSQ9UNS1 1208 aa29.54■■■□□ 2.32
CHFR-209ENST00000535181 DLC1Q96QB1 1528 aa29.52■■■□□ 2.32
CHFR-209ENST00000535181 SIRT1Q96EB6 747 aa29.51■■■□□ 2.31
CHFR-209ENST00000535181 TRPM1Q7Z4N2 1603 aa29.51■■■□□ 2.31
CHFR-209ENST00000535181 FBXO41Q8TF61 875 aa29.5■■■□□ 2.31
CHFR-209ENST00000535181 FAM135BQ49AJ0 1406 aa29.5■■■□□ 2.31
CHFR-209ENST00000535181 MSH6P52701 1360 aa29.5■■■□□ 2.31
CHFR-209ENST00000535181 RBM33Q96EV2 1170 aaKnown RBP29.49■■■□□ 2.31
CHFR-209ENST00000535181 ADGRL3Q9HAR2 1447 aa29.47■■■□□ 2.31
CHFR-209ENST00000535181 STK26Q9P289 416 aa29.47■■■□□ 2.31
CHFR-209ENST00000535181 DCCP43146 1447 aa29.46■■■□□ 2.31
CHFR-209ENST00000535181 NALCNQ8IZF0 1738 aa29.45■■■□□ 2.31
CHFR-209ENST00000535181 TOM1O60784 492 aa29.45■■■□□ 2.31
CHFR-209ENST00000535181 C19orf44Q9H6X5 657 aa29.45■■■□□ 2.31
CHFR-209ENST00000535181 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.45■■■□□ 2.3
CHFR-209ENST00000535181 UBAP1LF5GYI3 381 aa29.43■■■□□ 2.3
CHFR-209ENST00000535181 NBPF8Q3BBV2 869 aa29.42■■■□□ 2.3
CHFR-209ENST00000535181 C14orf37Q86TY3 774 aa29.42■■■□□ 2.3
CHFR-209ENST00000535181 NBPF1Q3BBV0 1214 aa29.41■■■□□ 2.3
CHFR-209ENST00000535181 RALGAPBQ86X10 1494 aa29.41■■■□□ 2.3
CHFR-209ENST00000535181 ARHGEF28Q8N1W1 1705 aaKnown RBP29.4■■■□□ 2.3
CHFR-209ENST00000535181 GPRASP1Q5JY77 1395 aa29.39■■■□□ 2.3
CHFR-209ENST00000535181 CADPS2Q86UW7 1296 aa29.38■■■□□ 2.29
CHFR-209ENST00000535181 PLEKHH1Q9ULM0 1364 aa29.38■■■□□ 2.29
CHFR-209ENST00000535181 WAPLQ7Z5K2 1190 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms