RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 NRXN1Q9ULB1 1477 aa28.61■■■□□ 2.17
TNFRSF1A-205ENST00000534885 LAMC1P11047 1609 aa28.6■■■□□ 2.17
TNFRSF1A-205ENST00000534885 RPGRIP1LQ68CZ1 1315 aa28.6■■■□□ 2.17
TNFRSF1A-205ENST00000534885 C3P01024 1663 aa28.58■■■□□ 2.17
TNFRSF1A-205ENST00000534885 KIAA1210Q9ULL0 1709 aa28.57■■■□□ 2.16
TNFRSF1A-205ENST00000534885 CEBPAP49715 358 aaPredicted RBP28.57■■■□□ 2.16
TNFRSF1A-205ENST00000534885 TNRQ92752 1358 aa28.56■■■□□ 2.16
TNFRSF1A-205ENST00000534885 NUTM2DQ5VT03 806 aaPredicted RBP28.54■■■□□ 2.16
TNFRSF1A-205ENST00000534885 C11orf95C9JLR9 678 aaPredicted RBP28.54■■■□□ 2.16
TNFRSF1A-205ENST00000534885 DDX10Q13206 875 aaKnown RBP28.54■■■□□ 2.16
TNFRSF1A-205ENST00000534885 WASHC2AQ641Q2 1341 aa28.53■■■□□ 2.16
TNFRSF1A-205ENST00000534885 PIK3C2GO75747 1445 aa28.53■■■□□ 2.16
TNFRSF1A-205ENST00000534885 STAG3Q9UJ98 1225 aa28.53■■■□□ 2.16
TNFRSF1A-205ENST00000534885 CFAP70Q5T0N1 1121 aa28.52■■■□□ 2.16
TNFRSF1A-205ENST00000534885 A2ML1A8K2U0 1454 aa28.52■■■□□ 2.16
TNFRSF1A-205ENST00000534885 ST20-MTHFSA0A0A6YYL1 179 aa28.51■■■□□ 2.15
TNFRSF1A-205ENST00000534885 POLR1AO95602 1720 aaPredicted RBP28.49■■■□□ 2.15
TNFRSF1A-205ENST00000534885 VGFO15240 615 aaPredicted RBP28.49■■■□□ 2.15
TNFRSF1A-205ENST00000534885 IQGAP1P46940 1657 aa28.48■■■□□ 2.15
TNFRSF1A-205ENST00000534885 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
TNFRSF1A-205ENST00000534885 RIMS1Q86UR5 1692 aaKnown RBP28.47■■■□□ 2.15
TNFRSF1A-205ENST00000534885 ZFYVE9O95405 1425 aa28.46■■■□□ 2.15
TNFRSF1A-205ENST00000534885 ADAMTSL3P82987 1691 aa28.46■■■□□ 2.15
TNFRSF1A-205ENST00000534885 CCDC7Q96M83 1385 aa28.46■■■□□ 2.15
TNFRSF1A-205ENST00000534885 KIF7Q2M1P5 1343 aa28.43■■■□□ 2.14
TNFRSF1A-205ENST00000534885 SCAF11Q99590 1463 aaKnown RBP28.43■■■□□ 2.14
TNFRSF1A-205ENST00000534885 C14orf93Q9H972 538 aaKnown RBP28.42■■■□□ 2.14
TNFRSF1A-205ENST00000534885 UBR1Q8IWV7 1749 aa28.42■■■□□ 2.14
TNFRSF1A-205ENST00000534885 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
TNFRSF1A-205ENST00000534885 KDM5AP29375 1690 aaKnown RBP28.41■■■□□ 2.14
TNFRSF1A-205ENST00000534885 MIER1Q8N108 512 aa28.41■■■□□ 2.14
TNFRSF1A-205ENST00000534885 NLRP1Q9C000 1473 aa28.41■■■□□ 2.14
TNFRSF1A-205ENST00000534885 RIMS2Q9UQ26 1411 aa28.4■■■□□ 2.14
TNFRSF1A-205ENST00000534885 SENP3Q9H4L4 574 aaPredicted RBP28.39■■■□□ 2.13
TNFRSF1A-205ENST00000534885 ADGRB1O14514 1584 aa28.38■■■□□ 2.13
TNFRSF1A-205ENST00000534885 TESK2Q96S53 571 aa28.36■■■□□ 2.13
TNFRSF1A-205ENST00000534885 TMEM132EQ6IEE7 984 aa28.34■■■□□ 2.13
TNFRSF1A-205ENST00000534885 MYO3AQ8NEV4 1616 aa28.32■■■□□ 2.12
TNFRSF1A-205ENST00000534885 EIF3AQ14152 1382 aaKnown RBP28.31■■■□□ 2.12
TNFRSF1A-205ENST00000534885 POLR3GLQ9BT43 218 aa28.3■■■□□ 2.12
TNFRSF1A-205ENST00000534885 TMEM2Q9UHN6 1383 aa28.3■■■□□ 2.12
TNFRSF1A-205ENST00000534885 ASXL1Q8IXJ9 1541 aa28.3■■■□□ 2.12
TNFRSF1A-205ENST00000534885 ALKQ9UM73 1620 aa28.28■■■□□ 2.12
TNFRSF1A-205ENST00000534885 DISP3Q9P2K9 1392 aa28.28■■■□□ 2.12
TNFRSF1A-205ENST00000534885 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.27■■■□□ 2.12
TNFRSF1A-205ENST00000534885 TRAK1Q9UPV9 953 aa28.26■■■□□ 2.11
TNFRSF1A-205ENST00000534885 NRXN3Q9Y4C0 1643 aa28.24■■■□□ 2.11
TNFRSF1A-205ENST00000534885 SETD1AO15047 1707 aaKnown RBP28.22■■■□□ 2.11
TNFRSF1A-205ENST00000534885 PTPRMP28827 1452 aa28.22■■■□□ 2.11
TNFRSF1A-205ENST00000534885 CEP170BQ9Y4F5 1589 aaPredicted RBP28.22■■■□□ 2.11
TNFRSF1A-205ENST00000534885 HDGFP51858 240 aaKnown RBP28.22■■■□□ 2.11
TNFRSF1A-205ENST00000534885 TMF1P82094 1093 aa28.22■■■□□ 2.11
TNFRSF1A-205ENST00000534885 ARHGEF28Q8N1W1 1705 aaKnown RBP28.2■■■□□ 2.11
TNFRSF1A-205ENST00000534885 SLIT1O75093 1534 aa28.19■■■□□ 2.1
TNFRSF1A-205ENST00000534885 LTKP29376 864 aa28.19■■■□□ 2.1
TNFRSF1A-205ENST00000534885 ARHGAP23Q9P227 1491 aa28.18■■■□□ 2.1
TNFRSF1A-205ENST00000534885 CENPJQ9HC77 1338 aaPredicted RBP28.17■■■□□ 2.1
TNFRSF1A-205ENST00000534885 SETD1BQ9UPS6 1966 aaKnown RBP28.17■■■□□ 2.1
TNFRSF1A-205ENST00000534885 THEMISQ8N1K5 641 aaPredicted RBP28.17■■■□□ 2.1
TNFRSF1A-205ENST00000534885 QRICH2Q9H0J4 1663 aa28.17■■■□□ 2.1
TNFRSF1A-205ENST00000534885 STK26Q9P289 416 aa28.16■■■□□ 2.1
TNFRSF1A-205ENST00000534885 YTHDC2Q9H6S0 1430 aaKnown RBP28.16■■■□□ 2.1
TNFRSF1A-205ENST00000534885 ZNF142P52746 1687 aaPredicted RBP28.15■■■□□ 2.1
TNFRSF1A-205ENST00000534885 TXNDC2Q86VQ3 553 aa28.14■■■□□ 2.1
TNFRSF1A-205ENST00000534885 SBNO2Q9Y2G9 1366 aa28.13■■■□□ 2.09
TNFRSF1A-205ENST00000534885 ANP32CO43423 234 aa28.12■■■□□ 2.09
TNFRSF1A-205ENST00000534885 PLEKHG1Q9ULL1 1385 aa28.11■■■□□ 2.09
TNFRSF1A-205ENST00000534885 EID1Q9Y6B2 187 aa28.11■■■□□ 2.09
TNFRSF1A-205ENST00000534885 BCANQ96GW7 911 aa28.11■■■□□ 2.09
TNFRSF1A-205ENST00000534885 METP08581 1390 aa28.1■■■□□ 2.09
TNFRSF1A-205ENST00000534885 ADAMTS13Q76LX8 1427 aa28.09■■■□□ 2.09
TNFRSF1A-205ENST00000534885 SLC24A1O60721 1099 aa28.06■■■□□ 2.08
TNFRSF1A-205ENST00000534885 CDCA8Q53HL2 280 aa28.06■■■□□ 2.08
TNFRSF1A-205ENST00000534885 LRPPRCP42704 1394 aaKnown RBP28.06■■■□□ 2.08
TNFRSF1A-205ENST00000534885 SAFB2Q14151 953 aaKnown RBP eCLIP28.04■■■□□ 2.08
TNFRSF1A-205ENST00000534885 PRAM1Q96QH2 718 aa28.03■■■□□ 2.08
TNFRSF1A-205ENST00000534885 MYOM1P52179 1685 aa28.02■■■□□ 2.08
TNFRSF1A-205ENST00000534885 MED14O60244 1454 aa28.02■■■□□ 2.08
TNFRSF1A-205ENST00000534885 DLC1Q96QB1 1528 aa28.01■■■□□ 2.08
TNFRSF1A-205ENST00000534885 ABCC11Q96J66 1382 aa28.01■■■□□ 2.07
TNFRSF1A-205ENST00000534885 SLC26A8Q96RN1 970 aa28.01■■■□□ 2.07
TNFRSF1A-205ENST00000534885 POGKQ9P215 609 aa27.99■■■□□ 2.07
TNFRSF1A-205ENST00000534885 TULP4Q9NRJ4 1543 aa27.99■■■□□ 2.07
TNFRSF1A-205ENST00000534885 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
TNFRSF1A-205ENST00000534885 PRKRIP1Q9H875 184 aaPredicted RBP27.96■■■□□ 2.07
TNFRSF1A-205ENST00000534885 PANK3Q9H999 370 aa27.96■■■□□ 2.07
TNFRSF1A-205ENST00000534885 WAPLQ7Z5K2 1190 aa27.95■■■□□ 2.07
TNFRSF1A-205ENST00000534885 PLEKHH1Q9ULM0 1364 aa27.95■■■□□ 2.06
TNFRSF1A-205ENST00000534885 TECPR2O15040 1411 aa27.95■■■□□ 2.06
TNFRSF1A-205ENST00000534885 MINK1Q8N4C8 1332 aaPredicted RBP27.94■■■□□ 2.06
TNFRSF1A-205ENST00000534885 KDM4FA0A1W2PPD8 638 aa27.93■■■□□ 2.06
TNFRSF1A-205ENST00000534885 ANKLE2Q86XL3 938 aa27.93■■■□□ 2.06
TNFRSF1A-205ENST00000534885 EVC2Q86UK5 1308 aa27.93■■■□□ 2.06
TNFRSF1A-205ENST00000534885 PER1O15534 1290 aaPredicted RBP27.93■■■□□ 2.06
TNFRSF1A-205ENST00000534885 CPS1P31327 1500 aa27.93■■■□□ 2.06
TNFRSF1A-205ENST00000534885 DIP2AQ14689 1571 aa27.93■■■□□ 2.06
TNFRSF1A-205ENST00000534885 CNGB1Q14028 1251 aaPredicted RBP27.92■■■□□ 2.06
TNFRSF1A-205ENST00000534885 TBX22Q9Y458 520 aa27.92■■■□□ 2.06
TNFRSF1A-205ENST00000534885 CCER2I3L3R5 266 aa27.91■■■□□ 2.06
TNFRSF1A-205ENST00000534885 PTPRUQ92729 1446 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms