RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 STRCP1A6NGW2 1772 aa26.78■■□□□ 1.88
CAPRIN1-217ENST00000534825 PLEKHG1Q9ULL1 1385 aa26.77■■□□□ 1.88
CAPRIN1-217ENST00000534825 NUTM2DQ5VT03 806 aaPredicted RBP26.77■■□□□ 1.88
CAPRIN1-217ENST00000534825 SENP3Q9H4L4 574 aaPredicted RBP26.76■■□□□ 1.87
CAPRIN1-217ENST00000534825 LRRC7Q96NW7 1537 aa26.75■■□□□ 1.87
CAPRIN1-217ENST00000534825 PPP1R15AO75807 674 aaPredicted RBP26.75■■□□□ 1.87
CAPRIN1-217ENST00000534825 KCNA6P17658 529 aa26.75■■□□□ 1.87
CAPRIN1-217ENST00000534825 BCANQ96GW7 911 aa26.75■■□□□ 1.87
CAPRIN1-217ENST00000534825 SPHKAPQ2M3C7 1700 aa26.74■■□□□ 1.87
CAPRIN1-217ENST00000534825 SETD5Q9C0A6 1442 aa26.73■■□□□ 1.87
CAPRIN1-217ENST00000534825 FOXD1Q16676 465 aa26.72■■□□□ 1.87
CAPRIN1-217ENST00000534825 MPHOSPH9Q99550 1183 aa26.72■■□□□ 1.87
CAPRIN1-217ENST00000534825 TBX22Q9Y458 520 aa26.72■■□□□ 1.87
CAPRIN1-217ENST00000534825 TRPM2O94759 1503 aa26.7■■□□□ 1.87
CAPRIN1-217ENST00000534825 TOM1O60784 492 aa26.69■■□□□ 1.86
CAPRIN1-217ENST00000534825 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
CAPRIN1-217ENST00000534825 CLTCL1P53675 1640 aa26.67■■□□□ 1.86
CAPRIN1-217ENST00000534825 ACIN1Q9UKV3 1341 aaKnown RBP26.66■■□□□ 1.86
CAPRIN1-217ENST00000534825 ADAMTS13Q76LX8 1427 aa26.66■■□□□ 1.86
CAPRIN1-217ENST00000534825 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
CAPRIN1-217ENST00000534825 PIP4K2BP78356 416 aa26.62■■□□□ 1.85
CAPRIN1-217ENST00000534825 PROSER2Q86WR7 435 aaPredicted RBP26.62■■□□□ 1.85
CAPRIN1-217ENST00000534825 ALKQ9UM73 1620 aa26.61■■□□□ 1.85
CAPRIN1-217ENST00000534825 TMEM94Q12767 1356 aa26.6■■□□□ 1.85
CAPRIN1-217ENST00000534825 RBM33Q96EV2 1170 aaKnown RBP26.6■■□□□ 1.85
CAPRIN1-217ENST00000534825 HRCP23327 699 aa26.56■■□□□ 1.84
CAPRIN1-217ENST00000534825 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
CAPRIN1-217ENST00000534825 PIK3R4Q99570 1358 aa26.56■■□□□ 1.84
CAPRIN1-217ENST00000534825 NWD1Q149M9 1564 aa26.55■■□□□ 1.84
CAPRIN1-217ENST00000534825 RPGRIP1LQ68CZ1 1315 aa26.55■■□□□ 1.84
CAPRIN1-217ENST00000534825 NEXMIFQ5QGS0 1516 aa26.55■■□□□ 1.84
CAPRIN1-217ENST00000534825 XIRP1Q702N8 1843 aaKnown RBP26.54■■□□□ 1.84
CAPRIN1-217ENST00000534825 NKTRP30414 1462 aaKnown RBP26.54■■□□□ 1.84
CAPRIN1-217ENST00000534825 CHD2O14647 1828 aaKnown RBP26.53■■□□□ 1.84
CAPRIN1-217ENST00000534825 VGFO15240 615 aaPredicted RBP26.53■■□□□ 1.84
CAPRIN1-217ENST00000534825 KIF1BO60333 1816 aa26.53■■□□□ 1.84
CAPRIN1-217ENST00000534825 HSPA1LP34931 641 aa26.52■■□□□ 1.84
CAPRIN1-217ENST00000534825 AMOTL2Q9Y2J4 779 aa26.52■■□□□ 1.84
CAPRIN1-217ENST00000534825 DIP2AQ14689 1571 aa26.51■■□□□ 1.83
CAPRIN1-217ENST00000534825 CCDC144AA2RUR9 1427 aa26.51■■□□□ 1.83
CAPRIN1-217ENST00000534825 PTPRUQ92729 1446 aa26.51■■□□□ 1.83
CAPRIN1-217ENST00000534825 SETBP1Q9Y6X0 1596 aa26.5■■□□□ 1.83
CAPRIN1-217ENST00000534825 METP08581 1390 aa26.49■■□□□ 1.83
CAPRIN1-217ENST00000534825 NRXN3Q9Y4C0 1643 aa26.49■■□□□ 1.83
CAPRIN1-217ENST00000534825 SPATA31E1Q6ZUB1 1445 aa26.48■■□□□ 1.83
CAPRIN1-217ENST00000534825 RGL3Q3MIN7 710 aa26.47■■□□□ 1.83
CAPRIN1-217ENST00000534825 NCOA3Q9Y6Q9 1424 aa26.45■■□□□ 1.82
CAPRIN1-217ENST00000534825 MSH6P52701 1360 aa26.42■■□□□ 1.82
CAPRIN1-217ENST00000534825 ADGRF5Q8IZF2 1346 aa26.4■■□□□ 1.82
CAPRIN1-217ENST00000534825 C19orf44Q9H6X5 657 aa26.4■■□□□ 1.82
CAPRIN1-217ENST00000534825 ANKRD30BQ9BXX2 1392 aa26.4■■□□□ 1.82
CAPRIN1-217ENST00000534825 FAM135BQ49AJ0 1406 aa26.39■■□□□ 1.82
CAPRIN1-217ENST00000534825 SLAIN2Q9P270 581 aa26.38■■□□□ 1.81
CAPRIN1-217ENST00000534825 PPLO60437 1756 aa26.35■■□□□ 1.81
CAPRIN1-217ENST00000534825 C14orf37Q86TY3 774 aa26.35■■□□□ 1.81
CAPRIN1-217ENST00000534825 XRN1Q8IZH2 1706 aaKnown RBP26.34■■□□□ 1.81
CAPRIN1-217ENST00000534825 CADPS2Q86UW7 1296 aa26.31■■□□□ 1.8
CAPRIN1-217ENST00000534825 ATF3P18847 181 aa26.29■■□□□ 1.8
CAPRIN1-217ENST00000534825 SETD1AO15047 1707 aaKnown RBP26.28■■□□□ 1.8
CAPRIN1-217ENST00000534825 DISP3Q9P2K9 1392 aa26.27■■□□□ 1.8
CAPRIN1-217ENST00000534825 ROBO2Q9HCK4 1378 aa26.26■■□□□ 1.79
CAPRIN1-217ENST00000534825 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.25■■□□□ 1.79
CAPRIN1-217ENST00000534825 PIK3C2GO75747 1445 aa26.24■■□□□ 1.79
CAPRIN1-217ENST00000534825 C14orf93Q9H972 538 aaKnown RBP26.24■■□□□ 1.79
CAPRIN1-217ENST00000534825 IFT172Q9UG01 1749 aa26.24■■□□□ 1.79
CAPRIN1-217ENST00000534825 PRAG1Q86YV5 1406 aa26.23■■□□□ 1.79
CAPRIN1-217ENST00000534825 TMEM132EQ6IEE7 984 aa26.23■■□□□ 1.79
CAPRIN1-217ENST00000534825 PTCH1Q13635 1447 aa26.22■■□□□ 1.79
CAPRIN1-217ENST00000534825 ROBO1Q9Y6N7 1651 aa26.22■■□□□ 1.79
CAPRIN1-217ENST00000534825 DCCP43146 1447 aa26.22■■□□□ 1.79
CAPRIN1-217ENST00000534825 NRXN1Q9ULB1 1477 aa26.2■■□□□ 1.78
CAPRIN1-217ENST00000534825 ADGRL3Q9HAR2 1447 aa26.2■■□□□ 1.78
CAPRIN1-217ENST00000534825 CFAP70Q5T0N1 1121 aa26.19■■□□□ 1.78
CAPRIN1-217ENST00000534825 STK26Q9P289 416 aa26.18■■□□□ 1.78
CAPRIN1-217ENST00000534825 BRINP3Q76B58 766 aa26.17■■□□□ 1.78
CAPRIN1-217ENST00000534825 LRPPRCP42704 1394 aaKnown RBP26.17■■□□□ 1.78
CAPRIN1-217ENST00000534825 ABCC11Q96J66 1382 aa26.17■■□□□ 1.78
CAPRIN1-217ENST00000534825 MYOM2P54296 1465 aa26.17■■□□□ 1.78
CAPRIN1-217ENST00000534825 DCAF11Q8TEB1 546 aa26.16■■□□□ 1.78
CAPRIN1-217ENST00000534825 KDM2AQ9Y2K7 1162 aa26.15■■□□□ 1.78
CAPRIN1-217ENST00000534825 MST1RQ04912 1400 aa26.14■■□□□ 1.78
CAPRIN1-217ENST00000534825 WAPLQ7Z5K2 1190 aa26.14■■□□□ 1.78
CAPRIN1-217ENST00000534825 STAC3Q96MF2 364 aa26.14■■□□□ 1.78
CAPRIN1-217ENST00000534825 DHX57Q6P158 1386 aaKnown RBP26.14■■□□□ 1.78
CAPRIN1-217ENST00000534825 ASXL1Q8IXJ9 1541 aa26.14■■□□□ 1.77
CAPRIN1-217ENST00000534825 TECPR2O15040 1411 aa26.14■■□□□ 1.77
CAPRIN1-217ENST00000534825 ILDR2Q71H61 639 aa26.13■■□□□ 1.77
CAPRIN1-217ENST00000534825 SIRT1Q96EB6 747 aa26.11■■□□□ 1.77
CAPRIN1-217ENST00000534825 YTHDC2Q9H6S0 1430 aaKnown RBP26.11■■□□□ 1.77
CAPRIN1-217ENST00000534825 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
CAPRIN1-217ENST00000534825 NALCNQ8IZF0 1738 aa26.08■■□□□ 1.77
CAPRIN1-217ENST00000534825 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
CAPRIN1-217ENST00000534825 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
CAPRIN1-217ENST00000534825 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
CAPRIN1-217ENST00000534825 PHLPP1O60346 1717 aa26.04■■□□□ 1.76
CAPRIN1-217ENST00000534825 ORAI2Q96SN7 254 aa26.03■■□□□ 1.76
CAPRIN1-217ENST00000534825 JCADQ9P266 1359 aa26.03■■□□□ 1.76
CAPRIN1-217ENST00000534825 AHDC1Q5TGY3 1603 aaPredicted RBP26.03■■□□□ 1.76
CAPRIN1-217ENST00000534825 DDX17Q92841 729 aaKnown RBP26.02■■□□□ 1.76
CAPRIN1-217ENST00000534825 COL16A1Q07092 1604 aaPredicted RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms