RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 SHROOM2Q13796 1616 aa8.77□□□□□ -1.01
RAG1-203ENST00000534663 POLR1AO95602 1720 aaPredicted RBP8.76□□□□□ -1.01
RAG1-203ENST00000534663 E9PSI1 815 aa8.76□□□□□ -1.01
RAG1-203ENST00000534663 AMER1Q5JTC6 1135 aaPredicted RBP8.76□□□□□ -1.01
RAG1-203ENST00000534663 FTSJ3Q8IY81 847 aaKnown RBP8.76□□□□□ -1.01
RAG1-203ENST00000534663 CEP170Q5SW79 1584 aa8.76□□□□□ -1.01
RAG1-203ENST00000534663 AFAP1Q8N556 730 aa8.76□□□□□ -1.01
RAG1-203ENST00000534663 TRAK1Q9UPV9 953 aa8.76□□□□□ -1.01
RAG1-203ENST00000534663 TNNQ9UQP3 1299 aa8.76□□□□□ -1.01
RAG1-203ENST00000534663 MFAP1P55081 439 aaKnown RBP8.76□□□□□ -1.01
RAG1-203ENST00000534663 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
RAG1-203ENST00000534663 ATP10BO94823 1461 aa8.75□□□□□ -1.01
RAG1-203ENST00000534663 PLEKHH2Q8IVE3 1493 aa8.75□□□□□ -1.01
RAG1-203ENST00000534663 KIF3BO15066 747 aa8.75□□□□□ -1.01
RAG1-203ENST00000534663 ADGRL2O95490 1459 aa8.75□□□□□ -1.01
RAG1-203ENST00000534663 FAM135AQ9P2D6 1515 aa8.75□□□□□ -1.01
RAG1-203ENST00000534663 ITSN2Q9NZM3 1697 aa8.75□□□□□ -1.01
RAG1-203ENST00000534663 U2SURPO15042 1029 aaKnown RBP8.75□□□□□ -1.01
RAG1-203ENST00000534663 NUP160Q12769 1436 aa8.74□□□□□ -1.01
RAG1-203ENST00000534663 ARHGEF12Q9NZN5 1544 aa8.74□□□□□ -1.01
RAG1-203ENST00000534663 A2MP01023 1474 aa8.74□□□□□ -1.01
RAG1-203ENST00000534663 U2AF1L5P0DN76 240 aaPredicted RBP8.74□□□□□ -1.01
RAG1-203ENST00000534663 U2AF1Q01081 240 aaKnown RBP eCLIP8.74□□□□□ -1.01
RAG1-203ENST00000534663 ARHGAP5Q13017 1502 aa8.74□□□□□ -1.01
RAG1-203ENST00000534663 CGNL1Q0VF96 1302 aa8.73□□□□□ -1.01
RAG1-203ENST00000534663 HSP90AA1P07900 732 aaKnown RBP8.73□□□□□ -1.01
RAG1-203ENST00000534663 CCDC141Q6ZP82 1450 aa8.73□□□□□ -1.01
RAG1-203ENST00000534663 COL17A1Q9UMD9 1497 aaPredicted RBP8.73□□□□□ -1.01
RAG1-203ENST00000534663 ADGBQ8N7X0 1667 aa8.73□□□□□ -1.01
RAG1-203ENST00000534663 EFCAB2Q5VUJ9 269 aa8.72□□□□□ -1.01
RAG1-203ENST00000534663 BLMP54132 1417 aaPredicted RBP8.72□□□□□ -1.01
RAG1-203ENST00000534663 SPAG9O60271 1321 aaKnown RBP8.72□□□□□ -1.01
RAG1-203ENST00000534663 WWC1Q8IX03 1113 aa8.72□□□□□ -1.01
RAG1-203ENST00000534663 TCP11L2Q8N4U5 519 aa8.72□□□□□ -1.01
RAG1-203ENST00000534663 SLC12A5Q9H2X9 1139 aa8.72□□□□□ -1.01
RAG1-203ENST00000534663 FOXD4L1Q9NU39 408 aa8.72□□□□□ -1.01
RAG1-203ENST00000534663 PDZRN3Q9UPQ7 1066 aa8.72□□□□□ -1.01
RAG1-203ENST00000534663 TMEM132EQ6IEE7 984 aa8.71□□□□□ -1.01
RAG1-203ENST00000534663 NAP1L5Q96NT1 182 aaPredicted RBP8.71□□□□□ -1.01
RAG1-203ENST00000534663 MAPK8IP3Q9UPT6 1336 aa8.71□□□□□ -1.01
RAG1-203ENST00000534663 ITPRIPQ8IWB1 547 aa8.71□□□□□ -1.01
RAG1-203ENST00000534663 MAGI2Q86UL8 1455 aa8.71□□□□□ -1.02
RAG1-203ENST00000534663 ZMYM4Q5VZL5 1548 aa8.71□□□□□ -1.02
RAG1-203ENST00000534663 TSR2Q969E8 191 aaKnown RBP8.7□□□□□ -1.02
RAG1-203ENST00000534663 RLBP1P12271 317 aa8.7□□□□□ -1.02
RAG1-203ENST00000534663 PMFBP1Q8TBY8 1022 aa8.7□□□□□ -1.02
RAG1-203ENST00000534663 RWDD1Q9H446 243 aaPredicted RBP8.7□□□□□ -1.02
RAG1-203ENST00000534663 PCDHB15Q9Y5E8 787 aa8.7□□□□□ -1.02
RAG1-203ENST00000534663 MTHFSP49914 203 aa8.7□□□□□ -1.02
RAG1-203ENST00000534663 CFAP53Q96M91 514 aa8.7□□□□□ -1.02
RAG1-203ENST00000534663 SMC4Q9NTJ3 1288 aa8.7□□□□□ -1.02
RAG1-203ENST00000534663 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
RAG1-203ENST00000534663 SYCP2Q9BX26 1530 aa8.69□□□□□ -1.02
RAG1-203ENST00000534663 PLA2R1Q13018 1463 aa8.69□□□□□ -1.02
RAG1-203ENST00000534663 GGT6Q6P531 493 aa8.69□□□□□ -1.02
RAG1-203ENST00000534663 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
RAG1-203ENST00000534663 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
RAG1-203ENST00000534663 STK26Q9P289 416 aa8.69□□□□□ -1.02
RAG1-203ENST00000534663 KDM5DQ9BY66 1539 aa8.69□□□□□ -1.02
RAG1-203ENST00000534663 EIF3AQ14152 1382 aaKnown RBP8.68□□□□□ -1.02
RAG1-203ENST00000534663 GOLGA6L3A6NEY3 463 aa8.68□□□□□ -1.02
RAG1-203ENST00000534663 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
RAG1-203ENST00000534663 RARSP54136 660 aaKnown RBP8.68□□□□□ -1.02
RAG1-203ENST00000534663 ADGRF5Q8IZF2 1346 aa8.68□□□□□ -1.02
RAG1-203ENST00000534663 ZNF521Q96K83 1311 aa8.68□□□□□ -1.02
RAG1-203ENST00000534663 GPRASP1Q5JY77 1395 aa8.67□□□□□ -1.02
RAG1-203ENST00000534663 L1TD1Q5T7N2 865 aaKnown RBP8.67□□□□□ -1.02
RAG1-203ENST00000534663 ABCC10Q5T3U5 1492 aa8.67□□□□□ -1.02
RAG1-203ENST00000534663 ERCC6L2Q5T890 1561 aa8.67□□□□□ -1.02
RAG1-203ENST00000534663 RUNDC1Q96C34 613 aa8.67□□□□□ -1.02
RAG1-203ENST00000534663 SHANK2Q9UPX8 1470 aa8.67□□□□□ -1.02
RAG1-203ENST00000534663 CDC42BPAQ5VT25 1732 aa8.66□□□□□ -1.02
RAG1-203ENST00000534663 HSCBQ8IWL3 235 aa8.66□□□□□ -1.02
RAG1-203ENST00000534663 ELL2O00472 640 aaPredicted RBP8.66□□□□□ -1.02
RAG1-203ENST00000534663 PANK2Q9BZ23 570 aa8.66□□□□□ -1.02
RAG1-203ENST00000534663 C22orf23Q9BZE7 217 aa8.66□□□□□ -1.02
RAG1-203ENST00000534663 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.02
RAG1-203ENST00000534663 ZKSCAN2Q63HK3 967 aa8.65□□□□□ -1.02
RAG1-203ENST00000534663 DZIP1LQ8IYY4 767 aaKnown RBP8.65□□□□□ -1.02
RAG1-203ENST00000534663 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
RAG1-203ENST00000534663 MYH16Q9H6N6 1097 aa8.65□□□□□ -1.02
RAG1-203ENST00000534663 KANK1Q14678 1352 aa8.65□□□□□ -1.02
RAG1-203ENST00000534663 SRPK2P78362 688 aaKnown RBP8.65□□□□□ -1.02
RAG1-203ENST00000534663 USP19O94966 1318 aa8.65□□□□□ -1.02
RAG1-203ENST00000534663 WDR7Q9Y4E6 1490 aa8.65□□□□□ -1.02
RAG1-203ENST00000534663 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.03
RAG1-203ENST00000534663 EXOSC9Q06265 439 aaKnown RBP8.65□□□□□ -1.03
RAG1-203ENST00000534663 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.03
RAG1-203ENST00000534663 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.03
RAG1-203ENST00000534663 CROCC2H7BZ55 1655 aa8.64□□□□□ -1.03
RAG1-203ENST00000534663 ASXL1Q8IXJ9 1541 aa8.64□□□□□ -1.03
RAG1-203ENST00000534663 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
RAG1-203ENST00000534663 CABP2Q9NPB3 220 aa8.64□□□□□ -1.03
RAG1-203ENST00000534663 TRIM44Q96DX7 344 aaPredicted RBP8.64□□□□□ -1.03
RAG1-203ENST00000534663 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
RAG1-203ENST00000534663 NCLP19338 710 aaKnown RBP8.63□□□□□ -1.03
RAG1-203ENST00000534663 RRAGDQ9NQL2 400 aaPredicted RBP8.63□□□□□ -1.03
RAG1-203ENST00000534663 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
RAG1-203ENST00000534663 NSD3Q9BZ95 1437 aa8.63□□□□□ -1.03
RAG1-203ENST00000534663 TRAK2O60296 914 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms