RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.56
RPS3-220ENST00000534555 MSH6P52701 1360 aa24.82■■□□□ 1.56
RPS3-220ENST00000534555 SLAIN2Q9P270 581 aa24.82■■□□□ 1.56
RPS3-220ENST00000534555 PHLPP1O60346 1717 aa24.78■■□□□ 1.56
RPS3-220ENST00000534555 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
RPS3-220ENST00000534555 ZFYVE9O95405 1425 aa24.77■■□□□ 1.56
RPS3-220ENST00000534555 SETD1AO15047 1707 aaKnown RBP24.75■■□□□ 1.55
RPS3-220ENST00000534555 PPP1R15AO75807 674 aaPredicted RBP24.75■■□□□ 1.55
RPS3-220ENST00000534555 JCADQ9P266 1359 aa24.75■■□□□ 1.55
RPS3-220ENST00000534555 PLEKHG1Q9ULL1 1385 aa24.75■■□□□ 1.55
RPS3-220ENST00000534555 RIMS2Q9UQ26 1411 aa24.75■■□□□ 1.55
RPS3-220ENST00000534555 CHD2O14647 1828 aaKnown RBP24.75■■□□□ 1.55
RPS3-220ENST00000534555 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
RPS3-220ENST00000534555 FAM50AQ14320 339 aaKnown RBP24.72■■□□□ 1.55
RPS3-220ENST00000534555 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
RPS3-220ENST00000534555 RPRD2Q5VT52 1461 aaKnown RBP24.71■■□□□ 1.55
RPS3-220ENST00000534555 NUTM2DQ5VT03 806 aaPredicted RBP24.71■■□□□ 1.55
RPS3-220ENST00000534555 ANKRD50Q9ULJ7 1429 aa24.7■■□□□ 1.55
RPS3-220ENST00000534555 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
RPS3-220ENST00000534555 HDGFP51858 240 aaKnown RBP24.7■■□□□ 1.54
RPS3-220ENST00000534555 TMEM131LA2VDJ0 1609 aa24.69■■□□□ 1.54
RPS3-220ENST00000534555 TBX22Q9Y458 520 aa24.69■■□□□ 1.54
RPS3-220ENST00000534555 COL16A1Q07092 1604 aaPredicted RBP24.68■■□□□ 1.54
RPS3-220ENST00000534555 C14orf37Q86TY3 774 aa24.68■■□□□ 1.54
RPS3-220ENST00000534555 LRP6O75581 1613 aa24.66■■□□□ 1.54
RPS3-220ENST00000534555 ADAMTS13Q76LX8 1427 aa24.64■■□□□ 1.54
RPS3-220ENST00000534555 NCOA3Q9Y6Q9 1424 aa24.63■■□□□ 1.53
RPS3-220ENST00000534555 MEX3CQ5U5Q3 659 aaKnown RBP24.63■■□□□ 1.53
RPS3-220ENST00000534555 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.63■■□□□ 1.53
RPS3-220ENST00000534555 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.61■■□□□ 1.53
RPS3-220ENST00000534555 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
RPS3-220ENST00000534555 CADPS2Q86UW7 1296 aa24.6■■□□□ 1.53
RPS3-220ENST00000534555 TRIM52Q96A61 297 aa24.6■■□□□ 1.53
RPS3-220ENST00000534555 C19orf44Q9H6X5 657 aa24.6■■□□□ 1.53
RPS3-220ENST00000534555 ATF3P18847 181 aa24.59■■□□□ 1.53
RPS3-220ENST00000534555 E9PCH4 1651 aa24.57■■□□□ 1.52
RPS3-220ENST00000534555 ZNF772Q68DY9 489 aaPredicted RBP24.57■■□□□ 1.52
RPS3-220ENST00000534555 UPF1Q92900 1129 aaKnown RBP eCLIP24.57■■□□□ 1.52
RPS3-220ENST00000534555 AHDC1Q5TGY3 1603 aaPredicted RBP24.57■■□□□ 1.52
RPS3-220ENST00000534555 UNC13BO14795 1591 aa24.56■■□□□ 1.52
RPS3-220ENST00000534555 AMOTL2Q9Y2J4 779 aa24.56■■□□□ 1.52
RPS3-220ENST00000534555 PTPRUQ92729 1446 aa24.55■■□□□ 1.52
RPS3-220ENST00000534555 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
RPS3-220ENST00000534555 NUTM2BA6NNL0 878 aaPredicted RBP24.54■■□□□ 1.52
RPS3-220ENST00000534555 NUTM2EB1AL46 878 aaPredicted RBP24.54■■□□□ 1.52
RPS3-220ENST00000534555 BRINP3Q76B58 766 aa24.54■■□□□ 1.52
RPS3-220ENST00000534555 NUTM2AQ8IVF1 878 aaPredicted RBP24.54■■□□□ 1.52
RPS3-220ENST00000534555 DIP2AQ14689 1571 aa24.54■■□□□ 1.52
RPS3-220ENST00000534555 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
RPS3-220ENST00000534555 TRPM2O94759 1503 aa24.5■■□□□ 1.51
RPS3-220ENST00000534555 RXRBP28702 533 aa24.49■■□□□ 1.51
RPS3-220ENST00000534555 IQGAP3Q86VI3 1631 aa24.47■■□□□ 1.51
RPS3-220ENST00000534555 NUP155O75694 1391 aa24.46■■□□□ 1.51
RPS3-220ENST00000534555 ROCK1Q13464 1354 aa24.43■■□□□ 1.5
RPS3-220ENST00000534555 AFF2P51816 1311 aa24.43■■□□□ 1.5
RPS3-220ENST00000534555 ASXL1Q8IXJ9 1541 aa24.43■■□□□ 1.5
RPS3-220ENST00000534555 NRXN3Q9Y4C0 1643 aa24.43■■□□□ 1.5
RPS3-220ENST00000534555 ITGAEP38570 1179 aa24.42■■□□□ 1.5
RPS3-220ENST00000534555 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
RPS3-220ENST00000534555 MST1RQ04912 1400 aa24.42■■□□□ 1.5
RPS3-220ENST00000534555 DCCP43146 1447 aa24.41■■□□□ 1.5
RPS3-220ENST00000534555 XRN1Q8IZH2 1706 aaKnown RBP24.41■■□□□ 1.5
RPS3-220ENST00000534555 SETD5Q9C0A6 1442 aa24.4■■□□□ 1.5
RPS3-220ENST00000534555 METP08581 1390 aa24.4■■□□□ 1.5
RPS3-220ENST00000534555 ZNF326Q5BKZ1 582 aaKnown RBP24.39■■□□□ 1.49
RPS3-220ENST00000534555 NHSL1Q5SYE7 1610 aa24.37■■□□□ 1.49
RPS3-220ENST00000534555 LRRC59Q96AG4 307 aaKnown RBP24.37■■□□□ 1.49
RPS3-220ENST00000534555 C8orf37Q96NL8 207 aa24.37■■□□□ 1.49
RPS3-220ENST00000534555 SETBP1Q9Y6X0 1596 aa24.37■■□□□ 1.49
RPS3-220ENST00000534555 CDK12Q9NYV4 1490 aaPredicted RBP24.36■■□□□ 1.49
RPS3-220ENST00000534555 QTRT2Q9H974 415 aaKnown RBP24.34■■□□□ 1.49
RPS3-220ENST00000534555 PNPLA6Q8IY17 1366 aa24.33■■□□□ 1.49
RPS3-220ENST00000534555 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
RPS3-220ENST00000534555 RGS12O14924 1447 aa24.31■■□□□ 1.48
RPS3-220ENST00000534555 ADGRL3Q9HAR2 1447 aa24.3■■□□□ 1.48
RPS3-220ENST00000534555 RBM6P78332 1123 aaKnown RBP24.29■■□□□ 1.48
RPS3-220ENST00000534555 NALCNQ8IZF0 1738 aa24.28■■□□□ 1.48
RPS3-220ENST00000534555 ADAMTS2O95450 1211 aa24.28■■□□□ 1.48
RPS3-220ENST00000534555 PPARGC1BQ86YN6 1023 aaKnown RBP24.28■■□□□ 1.48
RPS3-220ENST00000534555 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
RPS3-220ENST00000534555 NGLY1Q96IV0 654 aa24.25■■□□□ 1.47
RPS3-220ENST00000534555 CLTCL1P53675 1640 aa24.24■■□□□ 1.47
RPS3-220ENST00000534555 C1orf167Q5SNV9 1468 aa24.24■■□□□ 1.47
RPS3-220ENST00000534555 ORAI2Q96SN7 254 aa24.23■■□□□ 1.47
RPS3-220ENST00000534555 ROBO2Q9HCK4 1378 aa24.18■■□□□ 1.46
RPS3-220ENST00000534555 SOS2Q07890 1332 aaPredicted RBP24.18■■□□□ 1.46
RPS3-220ENST00000534555 USP21Q9UK80 565 aa24.17■■□□□ 1.46
RPS3-220ENST00000534555 KIF1BO60333 1816 aa24.15■■□□□ 1.46
RPS3-220ENST00000534555 LAMC1P11047 1609 aa24.15■■□□□ 1.46
RPS3-220ENST00000534555 PTCH1Q13635 1447 aa24.14■■□□□ 1.45
RPS3-220ENST00000534555 VGFO15240 615 aaPredicted RBP24.12■■□□□ 1.45
RPS3-220ENST00000534555 TRPC5Q9UL62 973 aaPredicted RBP24.12■■□□□ 1.45
RPS3-220ENST00000534555 FNBP4Q8N3X1 1017 aaPredicted RBP24.11■■□□□ 1.45
RPS3-220ENST00000534555 ATAD2Q6PL18 1390 aa24.11■■□□□ 1.45
RPS3-220ENST00000534555 ATRNO75882 1429 aa24.07■■□□□ 1.44
RPS3-220ENST00000534555 NAIPQ13075 1403 aa24.06■■□□□ 1.44
RPS3-220ENST00000534555 ESCO1Q5FWF5 840 aa24.05■■□□□ 1.44
RPS3-220ENST00000534555 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
RPS3-220ENST00000534555 HFM1A2PYH4 1435 aa24.04■■□□□ 1.44
RPS3-220ENST00000534555 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms