RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 AMHR2Q16671 573 aa8.63□□□□□ -1.03
ECHDC1-223ENST00000534442 KIAA0586Q9BVV6 1533 aa8.63□□□□□ -1.03
ECHDC1-223ENST00000534442 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
ECHDC1-223ENST00000534442 FAM117AQ9C073 453 aa8.62□□□□□ -1.03
ECHDC1-223ENST00000534442 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
ECHDC1-223ENST00000534442 ARID4BQ4LE39 1312 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 PHF14O94880 888 aa8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 CDHR5Q9HBB8 845 aa8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 NPDC1Q9NQX5 325 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 PCDHGA4Q9Y5G9 962 aa8.6□□□□□ -1.03
ECHDC1-223ENST00000534442 PLEKHG3A1L390 1219 aa8.59□□□□□ -1.03
ECHDC1-223ENST00000534442 EN1Q05925 392 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-223ENST00000534442 EPAS1Q99814 870 aa8.59□□□□□ -1.03
ECHDC1-223ENST00000534442 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-223ENST00000534442 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
ECHDC1-223ENST00000534442 PREX1Q8TCU6 1659 aa8.59□□□□□ -1.03
ECHDC1-223ENST00000534442 SP7Q8TDD2 431 aaPredicted RBP8.58□□□□□ -1.04
ECHDC1-223ENST00000534442 EPRSP07814 1512 aaKnown RBP8.58□□□□□ -1.04
ECHDC1-223ENST00000534442 WIZO95785 1651 aa8.56□□□□□ -1.04
ECHDC1-223ENST00000534442 SENP3-EIF4A1A0A087X0R7 540 aa8.55□□□□□ -1.04
ECHDC1-223ENST00000534442 MAP3K7O43318 606 aa8.55□□□□□ -1.04
ECHDC1-223ENST00000534442 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-223ENST00000534442 SLAIN1Q8ND83 568 aa8.55□□□□□ -1.04
ECHDC1-223ENST00000534442 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
ECHDC1-223ENST00000534442 ZNF335Q9H4Z2 1342 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-223ENST00000534442 SETBP1Q9Y6X0 1596 aa8.54□□□□□ -1.04
ECHDC1-223ENST00000534442 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
ECHDC1-223ENST00000534442 TYW1BQ6NUM6 668 aa8.54□□□□□ -1.04
ECHDC1-223ENST00000534442 DDRGK1Q96HY6 314 aa8.53□□□□□ -1.04
ECHDC1-223ENST00000534442 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-223ENST00000534442 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
ECHDC1-223ENST00000534442 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
ECHDC1-223ENST00000534442 TMUB1Q9BVT8 246 aa8.52□□□□□ -1.05
ECHDC1-223ENST00000534442 ABCC2Q92887 1545 aa8.52□□□□□ -1.05
ECHDC1-223ENST00000534442 FOSBP53539 338 aa8.51□□□□□ -1.05
ECHDC1-223ENST00000534442 GIGYF2Q6Y7W6 1299 aaKnown RBP8.51□□□□□ -1.05
ECHDC1-223ENST00000534442 FBXW7Q969H0 707 aa8.51□□□□□ -1.05
ECHDC1-223ENST00000534442 PHOX2BQ99453 314 aa8.51□□□□□ -1.05
ECHDC1-223ENST00000534442 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
ECHDC1-223ENST00000534442 TOM1O60784 492 aa8.5□□□□□ -1.05
ECHDC1-223ENST00000534442 MS4A1P11836 297 aa8.5□□□□□ -1.05
ECHDC1-223ENST00000534442 CUL7Q14999 1698 aa8.49□□□□□ -1.05
ECHDC1-223ENST00000534442 HOXB3P14651 431 aaPredicted RBP8.49□□□□□ -1.05
ECHDC1-223ENST00000534442 KHSRPQ92945 711 aaKnown RBP eCLIP8.49□□□□□ -1.051e-13■■■■□ 24.3
ECHDC1-223ENST00000534442 ADAMTS12P58397 1594 aa8.48□□□□□ -1.05
ECHDC1-223ENST00000534442 YY1P25490 414 aa8.48□□□□□ -1.05
ECHDC1-223ENST00000534442 UHRF1BP1Q6BDS2 1440 aa8.47□□□□□ -1.05
ECHDC1-223ENST00000534442 POTEB2H3BUK9 544 aa8.47□□□□□ -1.05
ECHDC1-223ENST00000534442 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-223ENST00000534442 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
ECHDC1-223ENST00000534442 C6orf132Q5T0Z8 1188 aa8.47□□□□□ -1.05
ECHDC1-223ENST00000534442 CEP350Q5VT06 3117 aa8.46□□□□□ -1.05
ECHDC1-223ENST00000534442 NUDT7P0C024 238 aa8.46□□□□□ -1.06
ECHDC1-223ENST00000534442 MDM2Q00987 491 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-223ENST00000534442 ARSIQ5FYB1 569 aa8.46□□□□□ -1.06
ECHDC1-223ENST00000534442 ZNF454Q8N9F8 522 aa8.46□□□□□ -1.06
ECHDC1-223ENST00000534442 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
ECHDC1-223ENST00000534442 TTC37Q6PGP7 1564 aa8.46□□□□□ -1.06
ECHDC1-223ENST00000534442 KIAA0556O60303 1618 aa8.46□□□□□ -1.06
ECHDC1-223ENST00000534442 MAGI3Q5TCQ9 1506 aa8.45□□□□□ -1.06
ECHDC1-223ENST00000534442 PADI6Q6TGC4 694 aa8.45□□□□□ -1.06
ECHDC1-223ENST00000534442 TTC13Q8NBP0 860 aa8.45□□□□□ -1.06
ECHDC1-223ENST00000534442 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
ECHDC1-223ENST00000534442 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
ECHDC1-223ENST00000534442 CLCN1P35523 988 aa8.44□□□□□ -1.06
ECHDC1-223ENST00000534442 DOK7Q18PE1 504 aa8.44□□□□□ -1.06
ECHDC1-223ENST00000534442 GPR153Q6NV75 609 aa8.44□□□□□ -1.06
ECHDC1-223ENST00000534442 GPCPD1Q9NPB8 672 aa8.44□□□□□ -1.06
ECHDC1-223ENST00000534442 ADGRG1Q9Y653 693 aa8.44□□□□□ -1.06
ECHDC1-223ENST00000534442 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
ECHDC1-223ENST00000534442 METTL3Q86U44 580 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-223ENST00000534442 NLRP7Q8WX94 980 aa8.43□□□□□ -1.06
ECHDC1-223ENST00000534442 TRIM52Q96A61 297 aa8.43□□□□□ -1.06
ECHDC1-223ENST00000534442 ARAP3Q8WWN8 1544 aa8.43□□□□□ -1.06
ECHDC1-223ENST00000534442 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-223ENST00000534442 ARXQ96QS3 562 aa8.42□□□□□ -1.06
ECHDC1-223ENST00000534442 ZMYND15Q9H091 742 aa8.42□□□□□ -1.06
ECHDC1-223ENST00000534442 ZSWIM6Q9HCJ5 1215 aa8.42□□□□□ -1.06
ECHDC1-223ENST00000534442 NCOA1Q15788 1441 aa8.42□□□□□ -1.06
ECHDC1-223ENST00000534442 CD109Q6YHK3 1445 aa8.42□□□□□ -1.06
ECHDC1-223ENST00000534442 FER1L4A9Z1Z3 1794 aa8.42□□□□□ -1.06
ECHDC1-223ENST00000534442 RUSC2Q8N2Y8 1516 aa8.41□□□□□ -1.06
ECHDC1-223ENST00000534442 TTBK1Q5TCY1 1321 aaPredicted RBP8.41□□□□□ -1.06
ECHDC1-223ENST00000534442 OATP04181 439 aa8.41□□□□□ -1.06
ECHDC1-223ENST00000534442 PXYLP1Q8TE99 480 aa8.41□□□□□ -1.06
ECHDC1-223ENST00000534442 ALKQ9UM73 1620 aa8.4□□□□□ -1.06
ECHDC1-223ENST00000534442 FAM217BQ9NTX9 383 aaPredicted RBP8.4□□□□□ -1.06
ECHDC1-223ENST00000534442 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-223ENST00000534442 CEBPAP49715 358 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-223ENST00000534442 PRSS12P56730 875 aa8.39□□□□□ -1.07
ECHDC1-223ENST00000534442 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
ECHDC1-223ENST00000534442 LHX6Q9UPM6 363 aa8.39□□□□□ -1.07
ECHDC1-223ENST00000534442 POGZQ7Z3K3 1410 aa8.38□□□□□ -1.07
ECHDC1-223ENST00000534442 RIMBP2O15034 1052 aa8.38□□□□□ -1.07
ECHDC1-223ENST00000534442 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
ECHDC1-223ENST00000534442 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
ECHDC1-223ENST00000534442 FAM198AQ9UFP1 575 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms