RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 ZMYM4Q5VZL5 1548 aa38.86■■■■□ 3.81
SAMD1-202ENST00000533683 KTN1Q86UP2 1357 aaKnown RBP38.85■■■■□ 3.81
SAMD1-202ENST00000533683 SIGLEC1Q9BZZ2 1709 aa38.83■■■■□ 3.81
SAMD1-202ENST00000533683 PER1O15534 1290 aaPredicted RBP38.83■■■■□ 3.81
SAMD1-202ENST00000533683 CFAP70Q5T0N1 1121 aa38.83■■■■□ 3.81
SAMD1-202ENST00000533683 NRXN1Q9ULB1 1477 aa38.83■■■■□ 3.81
SAMD1-202ENST00000533683 CHGAP10645 457 aaKnown RBP38.82■■■■□ 3.81
SAMD1-202ENST00000533683 NOS1P29475 1434 aa38.82■■■■□ 3.81
SAMD1-202ENST00000533683 RALBP1Q15311 655 aa38.81■■■■□ 3.8
SAMD1-202ENST00000533683 ZC3H13Q5T200 1668 aaKnown RBP38.79■■■■□ 3.8
SAMD1-202ENST00000533683 ARHGAP31Q2M1Z3 1444 aa38.77■■■■□ 3.8
SAMD1-202ENST00000533683 EIF3AQ14152 1382 aaKnown RBP38.76■■■■□ 3.8
SAMD1-202ENST00000533683 MYBBP1AQ9BQG0 1328 aaKnown RBP38.75■■■■□ 3.79
SAMD1-202ENST00000533683 PPLO60437 1756 aa38.74■■■■□ 3.79
SAMD1-202ENST00000533683 PANK3Q9H999 370 aa38.74■■■■□ 3.79
SAMD1-202ENST00000533683 SYNMO15061 1565 aa38.74■■■■□ 3.79
SAMD1-202ENST00000533683 PIK3C2BO00750 1634 aa38.73■■■■□ 3.79
SAMD1-202ENST00000533683 TMC1Q8TDI8 760 aa38.72■■■■□ 3.79
SAMD1-202ENST00000533683 PARD3Q8TEW0 1356 aa38.71■■■■□ 3.79
SAMD1-202ENST00000533683 ZBED9Q6R2W3 1325 aa38.71■■■■□ 3.79
SAMD1-202ENST00000533683 PNISRQ8TF01 805 aaKnown RBP38.7■■■■□ 3.79
SAMD1-202ENST00000533683 BRD4O60885 1362 aaPredicted RBP38.69■■■■□ 3.78
SAMD1-202ENST00000533683 RPGRIP1LQ68CZ1 1315 aa38.68■■■■□ 3.78
SAMD1-202ENST00000533683 FKBP8Q14318 412 aa38.68■■■■□ 3.78
SAMD1-202ENST00000533683 CDCA8Q53HL2 280 aa38.67■■■■□ 3.78
SAMD1-202ENST00000533683 PIK3C2GO75747 1445 aa38.66■■■■□ 3.78
SAMD1-202ENST00000533683 SETBP1Q9Y6X0 1596 aa38.62■■■■□ 3.77
SAMD1-202ENST00000533683 NEFLP07196 543 aa38.61■■■■□ 3.77
SAMD1-202ENST00000533683 C14orf93Q9H972 538 aaKnown RBP38.6■■■■□ 3.77
SAMD1-202ENST00000533683 KIF13AQ9H1H9 1805 aa38.59■■■■□ 3.77
SAMD1-202ENST00000533683 REREQ9P2R6 1566 aa38.59■■■■□ 3.77
SAMD1-202ENST00000533683 NLRP13Q86W25 1043 aa38.58■■■■□ 3.77
SAMD1-202ENST00000533683 IDI1Q13907 227 aa38.58■■■■□ 3.77
SAMD1-202ENST00000533683 CC2D1BQ5T0F9 858 aaKnown RBP38.57■■■■□ 3.77
SAMD1-202ENST00000533683 PREX1Q8TCU6 1659 aa38.56■■■■□ 3.76
SAMD1-202ENST00000533683 SLC52A1Q9NWF4 448 aa38.55■■■■□ 3.76
SAMD1-202ENST00000533683 LRPPRCP42704 1394 aaKnown RBP38.55■■■■□ 3.76
SAMD1-202ENST00000533683 SLC24A1O60721 1099 aa38.55■■■■□ 3.76
SAMD1-202ENST00000533683 MYO3AQ8NEV4 1616 aa38.54■■■■□ 3.76
SAMD1-202ENST00000533683 NEXMIFQ5QGS0 1516 aa38.54■■■■□ 3.76
SAMD1-202ENST00000533683 AGLP35573 1532 aa38.53■■■■□ 3.76
SAMD1-202ENST00000533683 KDM5AP29375 1690 aaKnown RBP38.52■■■■□ 3.76
SAMD1-202ENST00000533683 MYOM1P52179 1685 aa38.52■■■■□ 3.76
SAMD1-202ENST00000533683 ADGRB1O14514 1584 aa38.52■■■■□ 3.76
SAMD1-202ENST00000533683 ERVK-7P63135 1459 aa38.52■■■■□ 3.76
SAMD1-202ENST00000533683 VGFO15240 615 aaPredicted RBP38.48■■■■□ 3.75
SAMD1-202ENST00000533683 SBNO2Q9Y2G9 1366 aa38.48■■■■□ 3.75
SAMD1-202ENST00000533683 NUTM2DQ5VT03 806 aaPredicted RBP38.47■■■■□ 3.75
SAMD1-202ENST00000533683 BCANQ96GW7 911 aa38.46■■■■□ 3.75
SAMD1-202ENST00000533683 KNSTRNQ9Y448 316 aa38.46■■■■□ 3.75
SAMD1-202ENST00000533683 TMEM132EQ6IEE7 984 aa38.44■■■■□ 3.74
SAMD1-202ENST00000533683 TRAK1Q9UPV9 953 aa38.44■■■■□ 3.74
SAMD1-202ENST00000533683 CENPJQ9HC77 1338 aaPredicted RBP38.44■■■■□ 3.74
SAMD1-202ENST00000533683 FBXO31Q5XUX0 539 aaPredicted RBP38.44■■■■□ 3.74
SAMD1-202ENST00000533683 PPP6R1Q9UPN7 881 aa38.44■■■■□ 3.74
SAMD1-202ENST00000533683 MYO5BQ9ULV0 1848 aa38.42■■■■□ 3.74
SAMD1-202ENST00000533683 TMEM131LA2VDJ0 1609 aa38.42■■■■□ 3.74
SAMD1-202ENST00000533683 AMER1Q5JTC6 1135 aaPredicted RBP38.41■■■■□ 3.74
SAMD1-202ENST00000533683 ZFYVE9O95405 1425 aa38.39■■■■□ 3.74
SAMD1-202ENST00000533683 ARHGEF40Q8TER5 1519 aa38.37■■■■□ 3.73
SAMD1-202ENST00000533683 CLTCQ00610 1675 aaKnown RBP38.36■■■■□ 3.73
SAMD1-202ENST00000533683 ASXL1Q8IXJ9 1541 aa38.36■■■■□ 3.73
SAMD1-202ENST00000533683 QRICH2Q9H0J4 1663 aa38.35■■■■□ 3.73
SAMD1-202ENST00000533683 SMG6Q86US8 1419 aaKnown RBP38.31■■■■□ 3.72
SAMD1-202ENST00000533683 SENP3-EIF4A1A0A087X0R7 540 aa38.31■■■■□ 3.72
SAMD1-202ENST00000533683 NPC1L1Q9UHC9 1359 aa38.3■■■■□ 3.72
SAMD1-202ENST00000533683 MLECQ14165 292 aa38.29■■■■□ 3.72
SAMD1-202ENST00000533683 PPP2R1AP30153 589 aa38.25■■■■□ 3.71
SAMD1-202ENST00000533683 ARHGEF28Q8N1W1 1705 aaKnown RBP38.25■■■■□ 3.71
SAMD1-202ENST00000533683 IRX6P78412 446 aaPredicted RBP38.23■■■■□ 3.71
SAMD1-202ENST00000533683 NUDCQ9Y266 331 aa38.23■■■■□ 3.71
SAMD1-202ENST00000533683 CARD14Q9BXL6 1004 aa38.22■■■■□ 3.71
SAMD1-202ENST00000533683 SPATA31D1Q6ZQQ2 1576 aa38.22■■■■□ 3.71
SAMD1-202ENST00000533683 INSRP06213 1382 aa38.2■■■■□ 3.71
SAMD1-202ENST00000533683 STAG3Q9UJ98 1225 aa38.17■■■■□ 3.7
SAMD1-202ENST00000533683 SENP3Q9H4L4 574 aaPredicted RBP38.17■■■■□ 3.7
SAMD1-202ENST00000533683 BLMP54132 1417 aaPredicted RBP38.14■■■■□ 3.7
SAMD1-202ENST00000533683 A2ML1A8K2U0 1454 aa38.11■■■■□ 3.69
SAMD1-202ENST00000533683 SLC12A5Q9H2X9 1139 aa38.1■■■■□ 3.69
SAMD1-202ENST00000533683 ERICH6BQ5W0A0 696 aa38.1■■■■□ 3.69
SAMD1-202ENST00000533683 TULP4Q9NRJ4 1543 aa38.1■■■■□ 3.69
SAMD1-202ENST00000533683 EVC2Q86UK5 1308 aa38.09■■■■□ 3.69
SAMD1-202ENST00000533683 STK26Q9P289 416 aa38.09■■■■□ 3.69
SAMD1-202ENST00000533683 PUS7Q96PZ0 661 aaKnown RBP38.09■■■■□ 3.69
SAMD1-202ENST00000533683 ESF1Q9H501 851 aaKnown RBP38.07■■■■□ 3.68
SAMD1-202ENST00000533683 ZMYM3Q14202 1370 aa38.07■■■■□ 3.68
SAMD1-202ENST00000533683 ALKQ9UM73 1620 aa38.06■■■■□ 3.68
SAMD1-202ENST00000533683 SALL2Q9Y467 1007 aaPredicted RBP38.06■■■■□ 3.68
SAMD1-202ENST00000533683 ADAMTS8Q9UP79 889 aa38.05■■■■□ 3.68
SAMD1-202ENST00000533683 YTHDC2Q9H6S0 1430 aaKnown RBP38.04■■■■□ 3.68
SAMD1-202ENST00000533683 PTPRMP28827 1452 aa38.03■■■■□ 3.68
SAMD1-202ENST00000533683 SAFB2Q14151 953 aaKnown RBP eCLIP38.03■■■■□ 3.68
SAMD1-202ENST00000533683 NSD3Q9BZ95 1437 aa38.03■■■■□ 3.68
SAMD1-202ENST00000533683 RIMS2Q9UQ26 1411 aa38■■■■□ 3.67
SAMD1-202ENST00000533683 PDE3BQ13370 1112 aa37.99■■■■□ 3.67
SAMD1-202ENST00000533683 WDR43Q15061 677 aaKnown RBP eCLIP37.99■■■■□ 3.67
SAMD1-202ENST00000533683 RNF123Q5XPI4 1314 aa37.99■■■■□ 3.67
SAMD1-202ENST00000533683 CABP2Q9NPB3 220 aa37.96■■■■□ 3.67
SAMD1-202ENST00000533683 PRAM1Q96QH2 718 aa37.95■■■■□ 3.66
SAMD1-202ENST00000533683 MYT1Q01538 1121 aa37.93■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms