RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 COG6Q9Y2V7 657 aa8.59□□□□□ -1.04
CTNND1-236ENST00000533667 DIAPH1O60610 1272 aaKnown RBP8.58□□□□□ -1.04
CTNND1-236ENST00000533667 RILPL2Q969X0 211 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 APAF1O14727 1248 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 TPM1P09493 284 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 RUNDC1Q96C34 613 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 BECN2A8MW95 431 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 NEXNQ0ZGT2 675 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
CTNND1-236ENST00000533667 C1orf141Q5JVX7 400 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 NUCB2P80303 420 aa8.58□□□□□ -1.04
CTNND1-236ENST00000533667 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
CTNND1-236ENST00000533667 MTERF4Q7Z6M4 381 aaKnown RBP8.58□□□□□ -1.04
CTNND1-236ENST00000533667 BRD4O60885 1362 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-236ENST00000533667 PLIN1O60240 522 aa8.57□□□□□ -1.04
CTNND1-236ENST00000533667 GPS2Q13227 327 aa8.57□□□□□ -1.04
CTNND1-236ENST00000533667 HSP90AB4PQ58FF6 505 aa8.57□□□□□ -1.04
CTNND1-236ENST00000533667 TPM2P07951 284 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 TEFQ10587 303 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 RNF20Q5VTR2 975 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 SYNE3Q6ZMZ3 975 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 RUSC2Q8N2Y8 1516 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 AKAP17AQ02040 695 aaKnown RBP8.56□□□□□ -1.04
CTNND1-236ENST00000533667 CEP89Q96ST8 783 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 TOMM22Q9NS69 142 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 RRP9O43818 475 aaKnown RBP8.56□□□□□ -1.04
CTNND1-236ENST00000533667 GNAI1P63096 354 aa8.56□□□□□ -1.04
CTNND1-236ENST00000533667 INTS3Q68E01 1043 aaKnown RBP8.56□□□□□ -1.04
CTNND1-236ENST00000533667 TPD52L1Q16890 204 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-236ENST00000533667 BCL2L13Q9BXK5 485 aa8.55□□□□□ -1.04
CTNND1-236ENST00000533667 CCDC70Q6NSX1 233 aa8.55□□□□□ -1.04
CTNND1-236ENST00000533667 DDX58O95786 925 aaKnown RBP8.55□□□□□ -1.04
CTNND1-236ENST00000533667 FYCO1Q9BQS8 1478 aa8.55□□□□□ -1.04
CTNND1-236ENST00000533667 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
CTNND1-236ENST00000533667 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-236ENST00000533667 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-236ENST00000533667 HOOK1Q9UJC3 728 aaKnown RBP8.54□□□□□ -1.04
CTNND1-236ENST00000533667 IGF1RP08069 1367 aa8.54□□□□□ -1.04
CTNND1-236ENST00000533667 WASHC2AQ641Q2 1341 aa8.54□□□□□ -1.04
CTNND1-236ENST00000533667 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
CTNND1-236ENST00000533667 LRRC9Q6ZRR7 1453 aa8.54□□□□□ -1.04
CTNND1-236ENST00000533667 MARCH6O60337 910 aa8.54□□□□□ -1.04
CTNND1-236ENST00000533667 FRAT2O75474 233 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-236ENST00000533667 RIPK4P57078 832 aa8.54□□□□□ -1.04
CTNND1-236ENST00000533667 ELL2O00472 640 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-236ENST00000533667 TRIM29Q14134 588 aa8.54□□□□□ -1.04
CTNND1-236ENST00000533667 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-236ENST00000533667 GAPVD1Q14C86 1478 aa8.54□□□□□ -1.04
CTNND1-236ENST00000533667 IFIT2P09913 472 aaKnown RBP8.53□□□□□ -1.04
CTNND1-236ENST00000533667 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-236ENST00000533667 GTF2E1P29083 439 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-236ENST00000533667 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-236ENST00000533667 TAF3Q5VWG9 929 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 ANKRD20A12PQ8NF67 263 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 FOXD4L4Q8WXT5 416 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-236ENST00000533667 CCDC47Q96A33 483 aaKnown RBP8.53□□□□□ -1.04
CTNND1-236ENST00000533667 G3V3G9 751 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 DCAF8Q5TAQ9 597 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 TTC5Q8N0Z6 440 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 CASKIN1Q8WXD9 1431 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 ERC2O15083 957 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 KIF21BO75037 1637 aa8.53□□□□□ -1.04
CTNND1-236ENST00000533667 ARID3AQ99856 593 aa8.52□□□□□ -1.04
CTNND1-236ENST00000533667 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
CTNND1-236ENST00000533667 IPO7O95373 1038 aaKnown RBP8.52□□□□□ -1.05
CTNND1-236ENST00000533667 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
CTNND1-236ENST00000533667 CREBRFQ8IUR6 639 aa8.52□□□□□ -1.05
CTNND1-236ENST00000533667 AMOTL1Q8IY63 956 aa8.52□□□□□ -1.05
CTNND1-236ENST00000533667 SCAPERQ9BY12 1400 aa8.52□□□□□ -1.05
CTNND1-236ENST00000533667 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
CTNND1-236ENST00000533667 SETQ01105 290 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-236ENST00000533667 MINK1Q8N4C8 1332 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-236ENST00000533667 C22orf23Q9BZE7 217 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 ANO2Q9NQ90 1003 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 ERICH3Q5RHP9 1530 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 G3BP1Q13283 466 aaKnown RBP eCLIP8.51□□□□□ -1.058e-9■□□□□ 11.1
CTNND1-236ENST00000533667 CPLX1O14810 134 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 CDC45O75419 566 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 WWC1Q8IX03 1113 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 TRDNQ13061 729 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 SMC3Q9UQE7 1217 aa8.51□□□□□ -1.05
CTNND1-236ENST00000533667 CCDC9Q9Y3X0 531 aaKnown RBP8.5□□□□□ -1.05
CTNND1-236ENST00000533667 RRBP1Q9P2E9 1410 aaKnown RBP8.5□□□□□ -1.05
CTNND1-236ENST00000533667 MRE11P49959 708 aa8.5□□□□□ -1.05
CTNND1-236ENST00000533667 NOL10Q9BSC4 688 aaKnown RBP8.5□□□□□ -1.05
CTNND1-236ENST00000533667 NINLQ9Y2I6 1382 aa8.5□□□□□ -1.05
CTNND1-236ENST00000533667 PES1O00541 588 aaKnown RBP8.5□□□□□ -1.05
CTNND1-236ENST00000533667 FKBP5Q13451 457 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-236ENST00000533667 BICD2Q8TD16 824 aa8.49□□□□□ -1.05
CTNND1-236ENST00000533667 NCOA2Q15596 1464 aa8.49□□□□□ -1.05
CTNND1-236ENST00000533667 HFM1A2PYH4 1435 aa8.49□□□□□ -1.05
CTNND1-236ENST00000533667 MCM2P49736 904 aa8.49□□□□□ -1.05
CTNND1-236ENST00000533667 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-236ENST00000533667 TEX35Q5T0J7 233 aa8.49□□□□□ -1.05
CTNND1-236ENST00000533667 SASS6Q6UVJ0 657 aa8.49□□□□□ -1.05
CTNND1-236ENST00000533667 NUTM2FA1L443 756 aa8.48□□□□□ -1.05
CTNND1-236ENST00000533667 CCDC73Q6ZRK6 1079 aa8.48□□□□□ -1.05
CTNND1-236ENST00000533667 FAM43AQ8N2R8 423 aa8.48□□□□□ -1.05
CTNND1-236ENST00000533667 PDE3AQ14432 1141 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms