RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 TXNDC2Q86VQ3 553 aa14.09□□□□□ -0.15
ZNF250-209ENST00000533543 SCAF11Q99590 1463 aaKnown RBP14.09□□□□□ -0.15
ZNF250-209ENST00000533543 ARHGAP23Q9P227 1491 aa14.09□□□□□ -0.15
ZNF250-209ENST00000533543 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.16
ZNF250-209ENST00000533543 SLIT1O75093 1534 aa14.08□□□□□ -0.16
ZNF250-209ENST00000533543 IQGAP3Q86VI3 1631 aa14.08□□□□□ -0.16
ZNF250-209ENST00000533543 TMEM2Q9UHN6 1383 aa14.08□□□□□ -0.16
ZNF250-209ENST00000533543 NAIPQ13075 1403 aa14.07□□□□□ -0.16
ZNF250-209ENST00000533543 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
ZNF250-209ENST00000533543 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
ZNF250-209ENST00000533543 IQGAP1P46940 1657 aa14.06□□□□□ -0.16
ZNF250-209ENST00000533543 IQSEC2Q5JU85 1478 aa14.06□□□□□ -0.16
ZNF250-209ENST00000533543 ADGRB3O60242 1522 aa14.05□□□□□ -0.16
ZNF250-209ENST00000533543 E9PCH4 1651 aa14.04□□□□□ -0.16
ZNF250-209ENST00000533543 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
ZNF250-209ENST00000533543 KDM5AP29375 1690 aaKnown RBP14.02□□□□□ -0.16
ZNF250-209ENST00000533543 CPS1P31327 1500 aa14.02□□□□□ -0.16
ZNF250-209ENST00000533543 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.17
ZNF250-209ENST00000533543 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
ZNF250-209ENST00000533543 UBAP1LF5GYI3 381 aa14□□□□□ -0.17
ZNF250-209ENST00000533543 TRIM52Q96A61 297 aa14□□□□□ -0.17
ZNF250-209ENST00000533543 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
ZNF250-209ENST00000533543 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
ZNF250-209ENST00000533543 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
ZNF250-209ENST00000533543 ZBTB22O15209 634 aa13.97□□□□□ -0.17
ZNF250-209ENST00000533543 PPP1R15AO75807 674 aaPredicted RBP13.97□□□□□ -0.17
ZNF250-209ENST00000533543 DSG3P32926 999 aa13.97□□□□□ -0.17
ZNF250-209ENST00000533543 BCANQ96GW7 911 aa13.97□□□□□ -0.17
ZNF250-209ENST00000533543 SLC26A8Q96RN1 970 aa13.97□□□□□ -0.17
ZNF250-209ENST00000533543 STRCP1A6NGW2 1772 aa13.96□□□□□ -0.17
ZNF250-209ENST00000533543 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.17
ZNF250-209ENST00000533543 MYO5BQ9ULV0 1848 aa13.96□□□□□ -0.17
ZNF250-209ENST00000533543 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
ZNF250-209ENST00000533543 HDGFP51858 240 aaKnown RBP13.95□□□□□ -0.18
ZNF250-209ENST00000533543 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
ZNF250-209ENST00000533543 SPHKAPQ2M3C7 1700 aa13.94□□□□□ -0.18
ZNF250-209ENST00000533543 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
ZNF250-209ENST00000533543 TOM1O60784 492 aa13.92□□□□□ -0.18
ZNF250-209ENST00000533543 KCNA6P17658 529 aa13.92□□□□□ -0.18
ZNF250-209ENST00000533543 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
ZNF250-209ENST00000533543 TRPM2O94759 1503 aa13.91□□□□□ -0.18
ZNF250-209ENST00000533543 ZNF326Q5BKZ1 582 aaKnown RBP13.91□□□□□ -0.18
ZNF250-209ENST00000533543 CLTCL1P53675 1640 aa13.9□□□□□ -0.19
ZNF250-209ENST00000533543 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
ZNF250-209ENST00000533543 TMEM94Q12767 1356 aa13.88□□□□□ -0.19
ZNF250-209ENST00000533543 RBM33Q96EV2 1170 aaKnown RBP13.88□□□□□ -0.19
ZNF250-209ENST00000533543 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
ZNF250-209ENST00000533543 SETD5Q9C0A6 1442 aa13.88□□□□□ -0.19
ZNF250-209ENST00000533543 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
ZNF250-209ENST00000533543 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
ZNF250-209ENST00000533543 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
ZNF250-209ENST00000533543 NWD1Q149M9 1564 aa13.87□□□□□ -0.19
ZNF250-209ENST00000533543 NKTRP30414 1462 aaKnown RBP13.86□□□□□ -0.19
ZNF250-209ENST00000533543 HSPA1LP34931 641 aa13.85□□□□□ -0.19
ZNF250-209ENST00000533543 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.19
ZNF250-209ENST00000533543 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
ZNF250-209ENST00000533543 NEXMIFQ5QGS0 1516 aa13.83□□□□□ -0.2
ZNF250-209ENST00000533543 DIP2AQ14689 1571 aa13.83□□□□□ -0.2
ZNF250-209ENST00000533543 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
ZNF250-209ENST00000533543 CHD2O14647 1828 aaKnown RBP13.81□□□□□ -0.2
ZNF250-209ENST00000533543 KIF1BO60333 1816 aa13.81□□□□□ -0.2
ZNF250-209ENST00000533543 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
ZNF250-209ENST00000533543 NRXN3Q9Y4C0 1643 aa13.81□□□□□ -0.2
ZNF250-209ENST00000533543 CCDC144AA2RUR9 1427 aa13.81□□□□□ -0.2
ZNF250-209ENST00000533543 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
ZNF250-209ENST00000533543 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
ZNF250-209ENST00000533543 ACIN1Q9UKV3 1341 aaKnown RBP13.8□□□□□ -0.2
ZNF250-209ENST00000533543 METP08581 1390 aa13.79□□□□□ -0.2
ZNF250-209ENST00000533543 MSH6P52701 1360 aa13.79□□□□□ -0.2
ZNF250-209ENST00000533543 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
ZNF250-209ENST00000533543 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
ZNF250-209ENST00000533543 RGL3Q3MIN7 710 aa13.77□□□□□ -0.21
ZNF250-209ENST00000533543 C14orf37Q86TY3 774 aa13.77□□□□□ -0.21
ZNF250-209ENST00000533543 DISP3Q9P2K9 1392 aa13.77□□□□□ -0.21
ZNF250-209ENST00000533543 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
ZNF250-209ENST00000533543 ABCB7O75027 752 aa13.76□□□□□ -0.21
ZNF250-209ENST00000533543 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
ZNF250-209ENST00000533543 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
ZNF250-209ENST00000533543 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
ZNF250-209ENST00000533543 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
ZNF250-209ENST00000533543 ADGRF5Q8IZF2 1346 aa13.73□□□□□ -0.21
ZNF250-209ENST00000533543 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
ZNF250-209ENST00000533543 PPLO60437 1756 aa13.73□□□□□ -0.21
ZNF250-209ENST00000533543 HRCP23327 699 aa13.72□□□□□ -0.21
ZNF250-209ENST00000533543 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
ZNF250-209ENST00000533543 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
ZNF250-209ENST00000533543 ANKRD30BQ9BXX2 1392 aa13.71□□□□□ -0.22
ZNF250-209ENST00000533543 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
ZNF250-209ENST00000533543 ATF3P18847 181 aa13.7□□□□□ -0.22
ZNF250-209ENST00000533543 CADPS2Q86UW7 1296 aa13.7□□□□□ -0.22
ZNF250-209ENST00000533543 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
ZNF250-209ENST00000533543 ROBO2Q9HCK4 1378 aa13.69□□□□□ -0.22
ZNF250-209ENST00000533543 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.68□□□□□ -0.22
ZNF250-209ENST00000533543 POLA2Q14181 598 aa13.68□□□□□ -0.22
ZNF250-209ENST00000533543 PTCH1Q13635 1447 aa13.67□□□□□ -0.22
ZNF250-209ENST00000533543 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
ZNF250-209ENST00000533543 PIK3C2GO75747 1445 aa13.66□□□□□ -0.22
ZNF250-209ENST00000533543 DCCP43146 1447 aa13.66□□□□□ -0.22
ZNF250-209ENST00000533543 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
ZNF250-209ENST00000533543 ILDR2Q71H61 639 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms