RNA–Protein interactions for RNA: ENST00000533341.2

GRAMD1B-209, Transcript of GRAM domain containing 1B, humanhuman

TSL 2 BASIC

Gene GRAMD1B, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-209ENST00000533341 SENP3Q9H4L4 574 aaPredicted RBP30.02■■■□□ 2.4
GRAMD1B-209ENST00000533341 IQGAP3Q86VI3 1631 aa30.01■■■□□ 2.39
GRAMD1B-209ENST00000533341 ALKQ9UM73 1620 aa30■■■□□ 2.39
GRAMD1B-209ENST00000533341 KCNA6P17658 529 aa29.99■■■□□ 2.39
GRAMD1B-209ENST00000533341 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
GRAMD1B-209ENST00000533341 XIRP1Q702N8 1843 aaKnown RBP29.96■■■□□ 2.39
GRAMD1B-209ENST00000533341 TMEM131LA2VDJ0 1609 aa29.96■■■□□ 2.39
GRAMD1B-209ENST00000533341 PROSER2Q86WR7 435 aaPredicted RBP29.95■■■□□ 2.39
GRAMD1B-209ENST00000533341 ZFYVE9O95405 1425 aa29.92■■■□□ 2.38
GRAMD1B-209ENST00000533341 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.92■■■□□ 2.38
GRAMD1B-209ENST00000533341 TMEM94Q12767 1356 aa29.91■■■□□ 2.38
GRAMD1B-209ENST00000533341 PLEKHG1Q9ULL1 1385 aa29.9■■■□□ 2.38
GRAMD1B-209ENST00000533341 NUTM2DQ5VT03 806 aaPredicted RBP29.89■■■□□ 2.38
GRAMD1B-209ENST00000533341 RRBP1Q9P2E9 1410 aaKnown RBP29.88■■■□□ 2.37
GRAMD1B-209ENST00000533341 RBM33Q96EV2 1170 aaKnown RBP29.88■■■□□ 2.37
GRAMD1B-209ENST00000533341 SOCS7O14512 581 aa29.85■■■□□ 2.37
GRAMD1B-209ENST00000533341 MED1Q15648 1581 aaPredicted RBP29.85■■■□□ 2.37
GRAMD1B-209ENST00000533341 NKTRP30414 1462 aaKnown RBP29.84■■■□□ 2.37
GRAMD1B-209ENST00000533341 NWD1Q149M9 1564 aa29.83■■■□□ 2.37
GRAMD1B-209ENST00000533341 CHD2O14647 1828 aaKnown RBP29.81■■■□□ 2.36
GRAMD1B-209ENST00000533341 TBX22Q9Y458 520 aa29.81■■■□□ 2.36
GRAMD1B-209ENST00000533341 SPHKAPQ2M3C7 1700 aa29.81■■■□□ 2.36
GRAMD1B-209ENST00000533341 PHF23Q9BUL5 403 aaPredicted RBP29.79■■■□□ 2.36
GRAMD1B-209ENST00000533341 MSH6P52701 1360 aa29.78■■■□□ 2.36
GRAMD1B-209ENST00000533341 ZNF326Q5BKZ1 582 aaKnown RBP29.77■■■□□ 2.36
GRAMD1B-209ENST00000533341 TRIM52Q96A61 297 aa29.76■■■□□ 2.35
GRAMD1B-209ENST00000533341 NAIPQ13075 1403 aa29.76■■■□□ 2.35
GRAMD1B-209ENST00000533341 FAM135BQ49AJ0 1406 aa29.75■■■□□ 2.35
GRAMD1B-209ENST00000533341 C14orf37Q86TY3 774 aa29.74■■■□□ 2.35
GRAMD1B-209ENST00000533341 ADAMTS13Q76LX8 1427 aa29.72■■■□□ 2.35
GRAMD1B-209ENST00000533341 DIP2AQ14689 1571 aa29.72■■■□□ 2.35
GRAMD1B-209ENST00000533341 ROBO1Q9Y6N7 1651 aa29.7■■■□□ 2.35
GRAMD1B-209ENST00000533341 PIK3R4Q99570 1358 aa29.67■■■□□ 2.34
GRAMD1B-209ENST00000533341 TRPM2O94759 1503 aa29.67■■■□□ 2.34
GRAMD1B-209ENST00000533341 SLAIN2Q9P270 581 aa29.67■■■□□ 2.34
GRAMD1B-209ENST00000533341 HFM1A2PYH4 1435 aa29.65■■■□□ 2.34
GRAMD1B-209ENST00000533341 AMOTL2Q9Y2J4 779 aa29.64■■■□□ 2.34
GRAMD1B-209ENST00000533341 KIF1BO60333 1816 aa29.64■■■□□ 2.33
GRAMD1B-209ENST00000533341 CLTCL1P53675 1640 aa29.63■■■□□ 2.33
GRAMD1B-209ENST00000533341 NCOA3Q9Y6Q9 1424 aa29.62■■■□□ 2.33
GRAMD1B-209ENST00000533341 SLC4A1APQ9BWU0 796 aaKnown RBP29.61■■■□□ 2.33
GRAMD1B-209ENST00000533341 ATF3P18847 181 aa29.59■■■□□ 2.33
GRAMD1B-209ENST00000533341 CADPS2Q86UW7 1296 aa29.57■■■□□ 2.32
GRAMD1B-209ENST00000533341 C19orf44Q9H6X5 657 aa29.57■■■□□ 2.32
GRAMD1B-209ENST00000533341 SETBP1Q9Y6X0 1596 aa29.56■■■□□ 2.32
GRAMD1B-209ENST00000533341 PTPRUQ92729 1446 aa29.56■■■□□ 2.32
GRAMD1B-209ENST00000533341 NRXN3Q9Y4C0 1643 aa29.56■■■□□ 2.32
GRAMD1B-209ENST00000533341 PHLPP1O60346 1717 aa29.55■■■□□ 2.32
GRAMD1B-209ENST00000533341 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.55■■■□□ 2.32
GRAMD1B-209ENST00000533341 NEXMIFQ5QGS0 1516 aa29.54■■■□□ 2.32
GRAMD1B-209ENST00000533341 METP08581 1390 aa29.49■■■□□ 2.31
GRAMD1B-209ENST00000533341 VGFO15240 615 aaPredicted RBP29.48■■■□□ 2.31
GRAMD1B-209ENST00000533341 XRN1Q8IZH2 1706 aaKnown RBP29.48■■■□□ 2.31
GRAMD1B-209ENST00000533341 FOXD1Q16676 465 aa29.45■■■□□ 2.31
GRAMD1B-209ENST00000533341 JCADQ9P266 1359 aa29.44■■■□□ 2.3
GRAMD1B-209ENST00000533341 RPGRIP1LQ68CZ1 1315 aa29.44■■■□□ 2.3
GRAMD1B-209ENST00000533341 RGS17Q9UGC6 210 aaPredicted RBP29.41■■■□□ 2.3
GRAMD1B-209ENST00000533341 DCCP43146 1447 aa29.39■■■□□ 2.3
GRAMD1B-209ENST00000533341 COL16A1Q07092 1604 aaPredicted RBP29.39■■■□□ 2.3
GRAMD1B-209ENST00000533341 MPHOSPH9Q99550 1183 aa29.38■■■□□ 2.29
GRAMD1B-209ENST00000533341 BRINP3Q76B58 766 aa29.36■■■□□ 2.29
GRAMD1B-209ENST00000533341 PPLO60437 1756 aa29.36■■■□□ 2.29
GRAMD1B-209ENST00000533341 CCDC144AA2RUR9 1427 aa29.36■■■□□ 2.29
GRAMD1B-209ENST00000533341 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
GRAMD1B-209ENST00000533341 RGL3Q3MIN7 710 aa29.33■■■□□ 2.29
GRAMD1B-209ENST00000533341 ADGRL3Q9HAR2 1447 aa29.33■■■□□ 2.29
GRAMD1B-209ENST00000533341 MST1RQ04912 1400 aa29.31■■■□□ 2.28
GRAMD1B-209ENST00000533341 MEX3CQ5U5Q3 659 aaKnown RBP29.31■■■□□ 2.28
GRAMD1B-209ENST00000533341 SPATA31A6Q5VVP1 1343 aa29.3■■■□□ 2.28
GRAMD1B-209ENST00000533341 ACIN1Q9UKV3 1341 aaKnown RBP29.3■■■□□ 2.28
GRAMD1B-209ENST00000533341 SETD1AO15047 1707 aaKnown RBP29.3■■■□□ 2.28
GRAMD1B-209ENST00000533341 NALCNQ8IZF0 1738 aa29.29■■■□□ 2.28
GRAMD1B-209ENST00000533341 POTEAQ6S8J7 498 aa29.29■■■□□ 2.28
GRAMD1B-209ENST00000533341 ASXL1Q8IXJ9 1541 aa29.28■■■□□ 2.28
GRAMD1B-209ENST00000533341 PTCH1Q13635 1447 aa29.27■■■□□ 2.28
GRAMD1B-209ENST00000533341 SETD5Q9C0A6 1442 aa29.27■■■□□ 2.28
GRAMD1B-209ENST00000533341 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
GRAMD1B-209ENST00000533341 ROBO2Q9HCK4 1378 aa29.24■■■□□ 2.27
GRAMD1B-209ENST00000533341 ADGRF5Q8IZF2 1346 aa29.23■■■□□ 2.27
GRAMD1B-209ENST00000533341 NUTM2BA6NNL0 878 aaPredicted RBP29.22■■■□□ 2.27
GRAMD1B-209ENST00000533341 NUTM2EB1AL46 878 aaPredicted RBP29.22■■■□□ 2.27
GRAMD1B-209ENST00000533341 NUTM2AQ8IVF1 878 aaPredicted RBP29.22■■■□□ 2.27
GRAMD1B-209ENST00000533341 ANKRD30BQ9BXX2 1392 aa29.21■■■□□ 2.27
GRAMD1B-209ENST00000533341 SPATA31E1Q6ZUB1 1445 aa29.2■■■□□ 2.27
GRAMD1B-209ENST00000533341 LRP6O75581 1613 aa29.2■■■□□ 2.27
GRAMD1B-209ENST00000533341 NHSL1Q5SYE7 1610 aa29.2■■■□□ 2.27
GRAMD1B-209ENST00000533341 LRRC59Q96AG4 307 aaKnown RBP29.2■■■□□ 2.26
GRAMD1B-209ENST00000533341 DDX17Q92841 729 aaKnown RBP29.19■■■□□ 2.26
GRAMD1B-209ENST00000533341 STK26Q9P289 416 aa29.18■■■□□ 2.26
GRAMD1B-209ENST00000533341 C1orf167Q5SNV9 1468 aa29.17■■■□□ 2.26
GRAMD1B-209ENST00000533341 IFT172Q9UG01 1749 aa29.17■■■□□ 2.26
GRAMD1B-209ENST00000533341 ZNF772Q68DY9 489 aaPredicted RBP29.15■■■□□ 2.26
GRAMD1B-209ENST00000533341 RAB3GAP2Q9H2M9 1393 aa29.14■■■□□ 2.26
GRAMD1B-209ENST00000533341 PRAG1Q86YV5 1406 aa29.14■■■□□ 2.26
GRAMD1B-209ENST00000533341 ORAI2Q96SN7 254 aa29.12■■■□□ 2.25
GRAMD1B-209ENST00000533341 TMEM132EQ6IEE7 984 aa29.11■■■□□ 2.25
GRAMD1B-209ENST00000533341 LRPPRCP42704 1394 aaKnown RBP29.08■■■□□ 2.25
GRAMD1B-209ENST00000533341 PIK3C2GO75747 1445 aa29.07■■■□□ 2.24
GRAMD1B-209ENST00000533341 WAPLQ7Z5K2 1190 aa29.07■■■□□ 2.24
GRAMD1B-209ENST00000533341 PNPLA6Q8IY17 1366 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms