RNA–Protein interactions for RNA: ENST00000533305.5

LMO7-224, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-224ENST00000533305 ZNF467Q7Z7K2 595 aaPredicted RBP11.08□□□□□ -0.64
LMO7-224ENST00000533305 PNISRQ8TF01 805 aaKnown RBP11.08□□□□□ -0.64
LMO7-224ENST00000533305 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
LMO7-224ENST00000533305 RGL2O15211 777 aa11.06□□□□□ -0.64
LMO7-224ENST00000533305 ZNF579Q8NAF0 562 aaKnown RBP11.06□□□□□ -0.64
LMO7-224ENST00000533305 JPH4Q96JJ6 628 aa11.06□□□□□ -0.64
LMO7-224ENST00000533305 PLEKHD1A6NEE1 506 aa11.05□□□□□ -0.64
LMO7-224ENST00000533305 PDE3BQ13370 1112 aa11.05□□□□□ -0.64
LMO7-224ENST00000533305 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
LMO7-224ENST00000533305 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
LMO7-224ENST00000533305 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
LMO7-224ENST00000533305 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
LMO7-224ENST00000533305 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
LMO7-224ENST00000533305 COL17A1Q9UMD9 1497 aaPredicted RBP11.04□□□□□ -0.64
LMO7-224ENST00000533305 MYBBP1AQ9BQG0 1328 aaKnown RBP11.04□□□□□ -0.64
LMO7-224ENST00000533305 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
LMO7-224ENST00000533305 NUP155O75694 1391 aa11.03□□□□□ -0.64
LMO7-224ENST00000533305 PYGBP11216 843 aa11.03□□□□□ -0.64
LMO7-224ENST00000533305 DUOX2Q9NRD8 1548 aa11.03□□□□□ -0.64
LMO7-224ENST00000533305 IQGAP1P46940 1657 aa11.02□□□□□ -0.64
LMO7-224ENST00000533305 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.65
LMO7-224ENST00000533305 CHMP7Q8WUX9 453 aaPredicted RBP11.02□□□□□ -0.65
LMO7-224ENST00000533305 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
LMO7-224ENST00000533305 ERBINQ96RT1 1412 aa11.01□□□□□ -0.65
LMO7-224ENST00000533305 CEP152O94986 1710 aa11.01□□□□□ -0.65
LMO7-224ENST00000533305 ERCC6Q03468 1493 aa11.01□□□□□ -0.65
LMO7-224ENST00000533305 TSPY4P0CV99 314 aa11.01□□□□□ -0.65
LMO7-224ENST00000533305 TSPY10P0CW01 314 aa11.01□□□□□ -0.65
LMO7-224ENST00000533305 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
LMO7-224ENST00000533305 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
LMO7-224ENST00000533305 CLASP1Q7Z460 1538 aa11□□□□□ -0.65
LMO7-224ENST00000533305 DEPDC5O75140 1603 aa11□□□□□ -0.65
LMO7-224ENST00000533305 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
LMO7-224ENST00000533305 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
LMO7-224ENST00000533305 BLMP54132 1417 aaPredicted RBP11□□□□□ -0.65
LMO7-224ENST00000533305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.99□□□□□ -0.65
LMO7-224ENST00000533305 PLA2R1Q13018 1463 aa10.99□□□□□ -0.65
LMO7-224ENST00000533305 ABCC2Q92887 1545 aa10.99□□□□□ -0.65
LMO7-224ENST00000533305 NLRP13Q86W25 1043 aa10.98□□□□□ -0.65
LMO7-224ENST00000533305 CARD11Q9BXL7 1154 aa10.98□□□□□ -0.65
LMO7-224ENST00000533305 CCDC144AA2RUR9 1427 aa10.98□□□□□ -0.65
LMO7-224ENST00000533305 A2MP01023 1474 aa10.98□□□□□ -0.65
LMO7-224ENST00000533305 TTC37Q6PGP7 1564 aa10.98□□□□□ -0.65
LMO7-224ENST00000533305 CHD1O14646 1710 aa10.98□□□□□ -0.65
LMO7-224ENST00000533305 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
LMO7-224ENST00000533305 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
LMO7-224ENST00000533305 UHRF1BP1LA0JNW5 1464 aa10.97□□□□□ -0.65
LMO7-224ENST00000533305 SYNMO15061 1565 aa10.96□□□□□ -0.65
LMO7-224ENST00000533305 SYCP2Q9BX26 1530 aa10.96□□□□□ -0.65
LMO7-224ENST00000533305 TMC1Q8TDI8 760 aa10.96□□□□□ -0.65
LMO7-224ENST00000533305 MADDQ8WXG6 1647 aa10.95□□□□□ -0.66
LMO7-224ENST00000533305 RTEL1-TNFRSF6BF6WH68 1400 aa10.95□□□□□ -0.66
LMO7-224ENST00000533305 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
LMO7-224ENST00000533305 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
LMO7-224ENST00000533305 WDR7Q9Y4E6 1490 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 SCAPERQ9BY12 1400 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 NPC1L1Q9UHC9 1359 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 ST20-MTHFSA0A0A6YYL1 179 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 MS4A1P11836 297 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 PDAP1Q13442 181 aaKnown RBP10.94□□□□□ -0.66
LMO7-224ENST00000533305 B4GALNT3Q6L9W6 998 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 TET3O43151 1660 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 TRPM2O94759 1503 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 ABCC1P33527 1531 aa10.94□□□□□ -0.66
LMO7-224ENST00000533305 MAP3K13O43283 966 aa10.93□□□□□ -0.66
LMO7-224ENST00000533305 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
LMO7-224ENST00000533305 VWDEQ8N2E2 1590 aa10.93□□□□□ -0.66
LMO7-224ENST00000533305 TCERG1O14776 1098 aaKnown RBP10.92□□□□□ -0.66
LMO7-224ENST00000533305 ARHGAP5Q13017 1502 aa10.92□□□□□ -0.66
LMO7-224ENST00000533305 PTPRTO14522 1441 aa10.92□□□□□ -0.66
LMO7-224ENST00000533305 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 CCDC136Q96JN2 1154 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 TESK2Q96S53 571 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 IFT172Q9UG01 1749 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 MYOM1P52179 1685 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 PLCH2O75038 1416 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
LMO7-224ENST00000533305 RRP1P56182 461 aaKnown RBP10.9□□□□□ -0.66
LMO7-224ENST00000533305 EVX2Q03828 476 aa10.9□□□□□ -0.66
LMO7-224ENST00000533305 BCL11AQ9H165 835 aa10.9□□□□□ -0.66
LMO7-224ENST00000533305 ZNF777Q9ULD5 760 aaPredicted RBP10.9□□□□□ -0.66
LMO7-224ENST00000533305 NOP58Q9Y2X3 529 aaKnown RBP10.9□□□□□ -0.66
LMO7-224ENST00000533305 VIRMAQ69YN4 1812 aaKnown RBP10.9□□□□□ -0.66
LMO7-224ENST00000533305 ZCCHC11Q5TAX3 1644 aaKnown RBP10.89□□□□□ -0.67
LMO7-224ENST00000533305 ARID3CA6NKF2 412 aa10.89□□□□□ -0.67
LMO7-224ENST00000533305 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
LMO7-224ENST00000533305 DCAF11Q8TEB1 546 aa10.89□□□□□ -0.67
LMO7-224ENST00000533305 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.89□□□□□ -0.67
LMO7-224ENST00000533305 PIK3C2GO75747 1445 aa10.88□□□□□ -0.67
LMO7-224ENST00000533305 IFNL1Q8IU54 200 aa10.88□□□□□ -0.67
LMO7-224ENST00000533305 IPO9Q96P70 1041 aaKnown RBP10.88□□□□□ -0.67
LMO7-224ENST00000533305 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
LMO7-224ENST00000533305 KDM5AP29375 1690 aaKnown RBP10.88□□□□□ -0.67
LMO7-224ENST00000533305 INO80Q9ULG1 1556 aaPredicted RBP10.87□□□□□ -0.67
LMO7-224ENST00000533305 NGEFQ8N5V2 710 aa10.87□□□□□ -0.67
LMO7-224ENST00000533305 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
LMO7-224ENST00000533305 RCAN3Q9UKA8 241 aa10.87□□□□□ -0.67
LMO7-224ENST00000533305 ZFYVE16Q7Z3T8 1539 aa10.86□□□□□ -0.67
LMO7-224ENST00000533305 STK25O00506 426 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms