RNA–Protein interactions for RNA: ENST00000533119.1

SCP2-216, Transcript of sterol carrier protein 2, humanhuman

TSL 5

Gene SCP2, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-216ENST00000533119 RCCD1A6NED2 376 aa11.33□□□□□ -0.6
SCP2-216ENST00000533119 C3orf80F5H4A9 247 aa11.32□□□□□ -0.6
SCP2-216ENST00000533119 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
SCP2-216ENST00000533119 MTRQ99707 1265 aa11.32□□□□□ -0.6
SCP2-216ENST00000533119 TJAP1Q5JTD0 557 aa11.31□□□□□ -0.6
SCP2-216ENST00000533119 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
SCP2-216ENST00000533119 PCDHB3Q9Y5E6 796 aa11.3□□□□□ -0.6
SCP2-216ENST00000533119 APLP1P51693 650 aa11.29□□□□□ -0.6
SCP2-216ENST00000533119 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
SCP2-216ENST00000533119 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
SCP2-216ENST00000533119 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
SCP2-216ENST00000533119 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
SCP2-216ENST00000533119 IRX2Q9BZI1 471 aaPredicted RBP11.25□□□□□ -0.61
SCP2-216ENST00000533119 NR1I2O75469 434 aa11.24□□□□□ -0.61
SCP2-216ENST00000533119 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
SCP2-216ENST00000533119 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
SCP2-216ENST00000533119 CFHP08603 1231 aa11.23□□□□□ -0.61
SCP2-216ENST00000533119 ZPR1O75312 459 aa11.22□□□□□ -0.61
SCP2-216ENST00000533119 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.21□□□□□ -0.61
SCP2-216ENST00000533119 COPS2P61201 443 aa11.2□□□□□ -0.62
SCP2-216ENST00000533119 MAP2K5Q13163 448 aa11.2□□□□□ -0.62
SCP2-216ENST00000533119 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
SCP2-216ENST00000533119 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
SCP2-216ENST00000533119 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
SCP2-216ENST00000533119 GPR37O15354 613 aa11.18□□□□□ -0.62
SCP2-216ENST00000533119 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
SCP2-216ENST00000533119 RDH13Q8NBN7 331 aa11.17□□□□□ -0.62
SCP2-216ENST00000533119 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
SCP2-216ENST00000533119 BLOC1S3Q6QNY0 202 aa11.14□□□□□ -0.63
SCP2-216ENST00000533119 ZNF516Q92618 1163 aa11.14□□□□□ -0.63
SCP2-216ENST00000533119 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
SCP2-216ENST00000533119 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
SCP2-216ENST00000533119 SLC10A3P09131 477 aa11.11□□□□□ -0.63
SCP2-216ENST00000533119 FECHP22830 423 aa11.11□□□□□ -0.63
SCP2-216ENST00000533119 IRF6O14896 467 aa11.1□□□□□ -0.63
SCP2-216ENST00000533119 ADH1BP00325 375 aa11.1□□□□□ -0.63
SCP2-216ENST00000533119 ATP6V1AP38606 617 aa11.1□□□□□ -0.63
SCP2-216ENST00000533119 PRKD2Q9BZL6 878 aa11.1□□□□□ -0.63
SCP2-216ENST00000533119 ANKLE1Q8NAG6 615 aa11.08□□□□□ -0.64
SCP2-216ENST00000533119 CLCN1P35523 988 aa11.07□□□□□ -0.64
SCP2-216ENST00000533119 GCGRP47871 477 aa11.07□□□□□ -0.64
SCP2-216ENST00000533119 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCP2-216ENST00000533119 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
SCP2-216ENST00000533119 USP46P62068 366 aa11.06□□□□□ -0.64
SCP2-216ENST00000533119 Q3C1V9 767 aa11.06□□□□□ -0.64
SCP2-216ENST00000533119 SCUBE3Q8IX30 993 aa11.06□□□□□ -0.64
SCP2-216ENST00000533119 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
SCP2-216ENST00000533119 SLC6A16Q9GZN6 736 aa11.05□□□□□ -0.64
SCP2-216ENST00000533119 FMNL1O95466 1100 aaPredicted RBP11.04□□□□□ -0.64
SCP2-216ENST00000533119 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
SCP2-216ENST00000533119 SPSB2Q99619 263 aa11.04□□□□□ -0.64
SCP2-216ENST00000533119 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
SCP2-216ENST00000533119 FUT2Q10981 343 aa11.01□□□□□ -0.65
SCP2-216ENST00000533119 MORN1Q5T089 497 aa11.01□□□□□ -0.65
SCP2-216ENST00000533119 RNF223E7ERA6 249 aa11□□□□□ -0.65
SCP2-216ENST00000533119 NRG2O14511 850 aaPredicted RBP11□□□□□ -0.65
SCP2-216ENST00000533119 SLC19A1P41440 591 aa11□□□□□ -0.65
SCP2-216ENST00000533119 Q6ZNB5 142 aa11□□□□□ -0.65
SCP2-216ENST00000533119 CCDC102AQ96A19 550 aa11□□□□□ -0.65
SCP2-216ENST00000533119 GFRA3O60609 400 aa10.99□□□□□ -0.65
SCP2-216ENST00000533119 KDM4AO75164 1064 aa10.98□□□□□ -0.65
SCP2-216ENST00000533119 S1PR4O95977 384 aa10.98□□□□□ -0.65
SCP2-216ENST00000533119 CD46P15529 392 aa10.98□□□□□ -0.65
SCP2-216ENST00000533119 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
SCP2-216ENST00000533119 TLL1O43897 1013 aa10.97□□□□□ -0.65
SCP2-216ENST00000533119 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
SCP2-216ENST00000533119 PUS10Q3MIT2 529 aaKnown RBP10.97□□□□□ -0.65
SCP2-216ENST00000533119 BARGINQ6ZT62 677 aa10.95□□□□□ -0.66
SCP2-216ENST00000533119 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
SCP2-216ENST00000533119 MSS51Q4VC12 460 aa10.94□□□□□ -0.66
SCP2-216ENST00000533119 ZNF598Q86UK7 904 aaKnown RBP10.94□□□□□ -0.66
SCP2-216ENST00000533119 NUTM1Q86Y26 1132 aa10.94□□□□□ -0.66
SCP2-216ENST00000533119 SLC27A5Q9Y2P5 690 aa10.94□□□□□ -0.66
SCP2-216ENST00000533119 RPIAP49247 311 aa10.93□□□□□ -0.66
SCP2-216ENST00000533119 DIXDC1Q155Q3 683 aa10.93□□□□□ -0.66
SCP2-216ENST00000533119 NLRP7Q8WX94 980 aa10.93□□□□□ -0.66
SCP2-216ENST00000533119 ZMYND10O75800 440 aa10.92□□□□□ -0.66
SCP2-216ENST00000533119 CD2BP2O95400 341 aaKnown RBP10.92□□□□□ -0.66
SCP2-216ENST00000533119 ZBTB24O43167 697 aaPredicted RBP10.91□□□□□ -0.66
SCP2-216ENST00000533119 SPRYD7Q5W111 196 aa10.91□□□□□ -0.66
SCP2-216ENST00000533119 BRICD5Q6PL45 260 aa10.91□□□□□ -0.66
SCP2-216ENST00000533119 TTLL12Q14166 644 aaPredicted RBP10.9□□□□□ -0.66
SCP2-216ENST00000533119 THAP11Q96EK4 314 aa10.9□□□□□ -0.66
SCP2-216ENST00000533119 FAM217BQ9NTX9 383 aaPredicted RBP10.9□□□□□ -0.66
SCP2-216ENST00000533119 PRR20EP86478 221 aa10.89□□□□□ -0.67
SCP2-216ENST00000533119 PRR20CP86479 221 aa10.89□□□□□ -0.67
SCP2-216ENST00000533119 PRR20DP86480 221 aa10.89□□□□□ -0.67
SCP2-216ENST00000533119 PRR20BP86481 221 aa10.89□□□□□ -0.67
SCP2-216ENST00000533119 PRR20AP86496 221 aa10.89□□□□□ -0.67
SCP2-216ENST00000533119 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
SCP2-216ENST00000533119 NISCHQ9Y2I1 1504 aa10.89□□□□□ -0.67
SCP2-216ENST00000533119 AMHR2Q16671 573 aa10.88□□□□□ -0.67
SCP2-216ENST00000533119 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
SCP2-216ENST00000533119 TRAF7Q6Q0C0 670 aa10.87□□□□□ -0.67
SCP2-216ENST00000533119 USB1Q9BQ65 265 aaKnown RBP10.87□□□□□ -0.67
SCP2-216ENST00000533119 HOXA2O43364 376 aa10.85□□□□□ -0.67
SCP2-216ENST00000533119 AK7Q96M32 723 aa10.85□□□□□ -0.67
SCP2-216ENST00000533119 PPEF1O14829 653 aaPredicted RBP10.84□□□□□ -0.67
SCP2-216ENST00000533119 FCF1Q9Y324 198 aaKnown RBP10.84□□□□□ -0.67
SCP2-216ENST00000533119 DGAT1O75907 488 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms