RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
CHMP4A-206ENST00000533011 NGLY1Q96IV0 654 aa15.67■□□□□ 0.1
CHMP4A-206ENST00000533011 DAPK1P53355 1430 aa15.67■□□□□ 0.1
CHMP4A-206ENST00000533011 NWD1Q149M9 1564 aa15.66■□□□□ 0.1
CHMP4A-206ENST00000533011 BCANQ96GW7 911 aa15.66■□□□□ 0.1
CHMP4A-206ENST00000533011 C19orf44Q9H6X5 657 aa15.66■□□□□ 0.1
CHMP4A-206ENST00000533011 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
CHMP4A-206ENST00000533011 CFAP65Q6ZU64 1925 aaKnown RBP15.66■□□□□ 0.1
CHMP4A-206ENST00000533011 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
CHMP4A-206ENST00000533011 IDI1Q13907 227 aa15.65■□□□□ 0.1
CHMP4A-206ENST00000533011 QTRT2Q9H974 415 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-206ENST00000533011 AFF2P51816 1311 aa15.65■□□□□ 0.1
CHMP4A-206ENST00000533011 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
CHMP4A-206ENST00000533011 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
CHMP4A-206ENST00000533011 ATF3P18847 181 aa15.64■□□□□ 0.09
CHMP4A-206ENST00000533011 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
CHMP4A-206ENST00000533011 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
CHMP4A-206ENST00000533011 CCDC125Q86Z20 511 aa15.64■□□□□ 0.09
CHMP4A-206ENST00000533011 NUTM2AQ8IVF1 878 aaPredicted RBP15.64■□□□□ 0.09
CHMP4A-206ENST00000533011 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
CHMP4A-206ENST00000533011 AHDC1Q5TGY3 1603 aaPredicted RBP15.63■□□□□ 0.09
CHMP4A-206ENST00000533011 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
CHMP4A-206ENST00000533011 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
CHMP4A-206ENST00000533011 MROH1Q8NDA8 1641 aa15.62■□□□□ 0.09
CHMP4A-206ENST00000533011 C14orf37Q86TY3 774 aa15.62■□□□□ 0.09
CHMP4A-206ENST00000533011 SLC52A1Q9NWF4 448 aa15.62■□□□□ 0.09
CHMP4A-206ENST00000533011 DUOX2Q9NRD8 1548 aa15.62■□□□□ 0.09
CHMP4A-206ENST00000533011 TBX22Q9Y458 520 aa15.61■□□□□ 0.09
CHMP4A-206ENST00000533011 KANK1Q14678 1352 aa15.61■□□□□ 0.09
CHMP4A-206ENST00000533011 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
CHMP4A-206ENST00000533011 KIF15Q9NS87 1388 aa15.6■□□□□ 0.09
CHMP4A-206ENST00000533011 CEP152O94986 1710 aa15.6■□□□□ 0.09
CHMP4A-206ENST00000533011 RRP7BPQ9NSQ0 103 aa15.59■□□□□ 0.09
CHMP4A-206ENST00000533011 CHIC2Q9UKJ5 165 aa15.59■□□□□ 0.09
CHMP4A-206ENST00000533011 ANKRD30AQ9BXX3 1397 aa15.59■□□□□ 0.09
CHMP4A-206ENST00000533011 RGS12O14924 1447 aa15.59■□□□□ 0.09
CHMP4A-206ENST00000533011 PLEKHG1Q9ULL1 1385 aa15.57■□□□□ 0.08
CHMP4A-206ENST00000533011 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
CHMP4A-206ENST00000533011 BRINP3Q76B58 766 aa15.56■□□□□ 0.08
CHMP4A-206ENST00000533011 SETD5Q9C0A6 1442 aa15.56■□□□□ 0.08
CHMP4A-206ENST00000533011 ADGRL2O95490 1459 aa15.56■□□□□ 0.08
CHMP4A-206ENST00000533011 CHD2O14647 1828 aaKnown RBP15.56■□□□□ 0.08
CHMP4A-206ENST00000533011 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
CHMP4A-206ENST00000533011 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
CHMP4A-206ENST00000533011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.081e-7■■■■□ 23.6
CHMP4A-206ENST00000533011 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
CHMP4A-206ENST00000533011 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.54■□□□□ 0.08
CHMP4A-206ENST00000533011 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
CHMP4A-206ENST00000533011 NOS1P29475 1434 aa15.51■□□□□ 0.07
CHMP4A-206ENST00000533011 TRPC5Q9UL62 973 aaPredicted RBP15.51■□□□□ 0.07
CHMP4A-206ENST00000533011 ADGRB3O60242 1522 aa15.51■□□□□ 0.07
CHMP4A-206ENST00000533011 LMTK2Q8IWU2 1503 aa15.51■□□□□ 0.07
CHMP4A-206ENST00000533011 DCCP43146 1447 aa15.51■□□□□ 0.07
CHMP4A-206ENST00000533011 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.49■□□□□ 0.07
CHMP4A-206ENST00000533011 ZFYVE9O95405 1425 aa15.49■□□□□ 0.07
CHMP4A-206ENST00000533011 RRBP1Q9P2E9 1410 aaKnown RBP15.49■□□□□ 0.07
CHMP4A-206ENST00000533011 ITGAEP38570 1179 aa15.48■□□□□ 0.07
CHMP4A-206ENST00000533011 ANKRD50Q9ULJ7 1429 aa15.48■□□□□ 0.07
CHMP4A-206ENST00000533011 ROCK1Q13464 1354 aa15.48■□□□□ 0.07
CHMP4A-206ENST00000533011 USP21Q9UK80 565 aa15.47■□□□□ 0.07
CHMP4A-206ENST00000533011 SETBP1Q9Y6X0 1596 aa15.47■□□□□ 0.07
CHMP4A-206ENST00000533011 RIMS2Q9UQ26 1411 aa15.46■□□□□ 0.07
CHMP4A-206ENST00000533011 FNBP4Q8N3X1 1017 aaPredicted RBP15.45■□□□□ 0.06
CHMP4A-206ENST00000533011 AMOTL2Q9Y2J4 779 aa15.45■□□□□ 0.06
CHMP4A-206ENST00000533011 PNPLA6Q8IY17 1366 aa15.45■□□□□ 0.06
CHMP4A-206ENST00000533011 ASXL1Q8IXJ9 1541 aa15.44■□□□□ 0.06
CHMP4A-206ENST00000533011 RPRD2Q5VT52 1461 aaKnown RBP15.43■□□□□ 0.06
CHMP4A-206ENST00000533011 ADAMTS2O95450 1211 aa15.42■□□□□ 0.06
CHMP4A-206ENST00000533011 ADAMTS13Q76LX8 1427 aa15.41■□□□□ 0.06
CHMP4A-206ENST00000533011 PTCH1Q13635 1447 aa15.4■□□□□ 0.06
CHMP4A-206ENST00000533011 NHSL1Q5SYE7 1610 aa15.39■□□□□ 0.05
CHMP4A-206ENST00000533011 MST1RQ04912 1400 aa15.39■□□□□ 0.05
CHMP4A-206ENST00000533011 UNC13BO14795 1591 aa15.38■□□□□ 0.05
CHMP4A-206ENST00000533011 ATRNO75882 1429 aa15.38■□□□□ 0.05
CHMP4A-206ENST00000533011 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
CHMP4A-206ENST00000533011 TRPM2O94759 1503 aa15.38■□□□□ 0.05
CHMP4A-206ENST00000533011 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
CHMP4A-206ENST00000533011 EP400Q96L91 3159 aa15.36■□□□□ 0.05
CHMP4A-206ENST00000533011 CHGAP10645 457 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-206ENST00000533011 TMEM131LA2VDJ0 1609 aa15.35■□□□□ 0.05
CHMP4A-206ENST00000533011 LRP5O75197 1615 aa15.35■□□□□ 0.05
CHMP4A-206ENST00000533011 GJD4Q96KN9 370 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-206ENST00000533011 SOS2Q07890 1332 aaPredicted RBP15.34■□□□□ 0.05
CHMP4A-206ENST00000533011 IQGAP3Q86VI3 1631 aa15.32■□□□□ 0.04
CHMP4A-206ENST00000533011 GCC2Q8IWJ2 1684 aa15.32■□□□□ 0.04
CHMP4A-206ENST00000533011 NUP155O75694 1391 aa15.32■□□□□ 0.04
CHMP4A-206ENST00000533011 NAIPQ13075 1403 aa15.32■□□□□ 0.04
CHMP4A-206ENST00000533011 DDX17Q92841 729 aaKnown RBP15.31■□□□□ 0.04
CHMP4A-206ENST00000533011 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
CHMP4A-206ENST00000533011 HFM1A2PYH4 1435 aa15.29■□□□□ 0.04
CHMP4A-206ENST00000533011 ADGRL3Q9HAR2 1447 aa15.29■□□□□ 0.04
CHMP4A-206ENST00000533011 BCL9LQ86UU0 1499 aa15.28■□□□□ 0.04
CHMP4A-206ENST00000533011 MYO5BQ9ULV0 1848 aa15.28■□□□□ 0.04
CHMP4A-206ENST00000533011 E9PCH4 1651 aa15.28■□□□□ 0.04
CHMP4A-206ENST00000533011 LAMC1P11047 1609 aa15.28■□□□□ 0.04
CHMP4A-206ENST00000533011 C1orf167Q5SNV9 1468 aa15.27■□□□□ 0.03
CHMP4A-206ENST00000533011 HRCP23327 699 aa15.26■□□□□ 0.03
CHMP4A-206ENST00000533011 DEFB132Q7Z7B7 95 aa15.26■□□□□ 0.03
CHMP4A-206ENST00000533011 XRN1Q8IZH2 1706 aaKnown RBP15.24■□□□□ 0.03
CHMP4A-206ENST00000533011 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms