RNA–Protein interactions for RNA: ENST00000532718.5

SLC39A4-209, Transcript of solute carrier family 39 member 4, humanhuman

TSL 1 (best)

Gene SLC39A4, Length 668 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-209ENST00000532718 ITGAEP38570 1179 aa23.31■■□□□ 1.32
SLC39A4-209ENST00000532718 ROCK1Q13464 1354 aa23.3■■□□□ 1.32
SLC39A4-209ENST00000532718 XIRP1Q702N8 1843 aaKnown RBP23.3■■□□□ 1.32
SLC39A4-209ENST00000532718 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
SLC39A4-209ENST00000532718 UNC13BO14795 1591 aa23.27■■□□□ 1.32
SLC39A4-209ENST00000532718 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
SLC39A4-209ENST00000532718 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.26■■□□□ 1.31
SLC39A4-209ENST00000532718 MYO5BQ9ULV0 1848 aa23.25■■□□□ 1.31
SLC39A4-209ENST00000532718 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
SLC39A4-209ENST00000532718 RBM33Q96EV2 1170 aaKnown RBP23.25■■□□□ 1.31
SLC39A4-209ENST00000532718 PLEKHG1Q9ULL1 1385 aa23.25■■□□□ 1.31
SLC39A4-209ENST00000532718 NUP155O75694 1391 aa23.24■■□□□ 1.31
SLC39A4-209ENST00000532718 FAM135BQ49AJ0 1406 aa23.24■■□□□ 1.31
SLC39A4-209ENST00000532718 NKTRP30414 1462 aaKnown RBP23.23■■□□□ 1.31
SLC39A4-209ENST00000532718 MSH6P52701 1360 aa23.22■■□□□ 1.31
SLC39A4-209ENST00000532718 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
SLC39A4-209ENST00000532718 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
SLC39A4-209ENST00000532718 E9PCH4 1651 aa23.2■■□□□ 1.3
SLC39A4-209ENST00000532718 IQGAP3Q86VI3 1631 aa23.19■■□□□ 1.3
SLC39A4-209ENST00000532718 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
SLC39A4-209ENST00000532718 TBX22Q9Y458 520 aa23.19■■□□□ 1.3
SLC39A4-209ENST00000532718 NUTM2DQ5VT03 806 aaPredicted RBP23.18■■□□□ 1.3
SLC39A4-209ENST00000532718 C14orf37Q86TY3 774 aa23.17■■□□□ 1.3
SLC39A4-209ENST00000532718 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
SLC39A4-209ENST00000532718 ROBO1Q9Y6N7 1651 aa23.14■■□□□ 1.29
SLC39A4-209ENST00000532718 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
SLC39A4-209ENST00000532718 PIK3R4Q99570 1358 aa23.09■■□□□ 1.29
SLC39A4-209ENST00000532718 DIP2AQ14689 1571 aa23.09■■□□□ 1.29
SLC39A4-209ENST00000532718 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.29
SLC39A4-209ENST00000532718 ZNF326Q5BKZ1 582 aaKnown RBP23.08■■□□□ 1.29
SLC39A4-209ENST00000532718 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.28
SLC39A4-209ENST00000532718 ATF3P18847 181 aa23.06■■□□□ 1.28
SLC39A4-209ENST00000532718 CADPS2Q86UW7 1296 aa23.05■■□□□ 1.28
SLC39A4-209ENST00000532718 TRPM2O94759 1503 aa23.04■■□□□ 1.28
SLC39A4-209ENST00000532718 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
SLC39A4-209ENST00000532718 AMOTL2Q9Y2J4 779 aa23.04■■□□□ 1.28
SLC39A4-209ENST00000532718 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
SLC39A4-209ENST00000532718 SPHKAPQ2M3C7 1700 aa23.03■■□□□ 1.28
SLC39A4-209ENST00000532718 RGS17Q9UGC6 210 aaPredicted RBP23.02■■□□□ 1.28
SLC39A4-209ENST00000532718 JCADQ9P266 1359 aa23.01■■□□□ 1.27
SLC39A4-209ENST00000532718 RRBP1Q9P2E9 1410 aaKnown RBP22.99■■□□□ 1.27
SLC39A4-209ENST00000532718 TRIM52Q96A61 297 aa22.98■■□□□ 1.27
SLC39A4-209ENST00000532718 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.97■■□□□ 1.27
SLC39A4-209ENST00000532718 NAIPQ13075 1403 aa22.94■■□□□ 1.26
SLC39A4-209ENST00000532718 PTPRUQ92729 1446 aa22.94■■□□□ 1.26
SLC39A4-209ENST00000532718 POTEAQ6S8J7 498 aa22.93■■□□□ 1.26
SLC39A4-209ENST00000532718 SETBP1Q9Y6X0 1596 aa22.93■■□□□ 1.26
SLC39A4-209ENST00000532718 KIF1BO60333 1816 aa22.92■■□□□ 1.26
SLC39A4-209ENST00000532718 MEX3CQ5U5Q3 659 aaKnown RBP22.91■■□□□ 1.26
SLC39A4-209ENST00000532718 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
SLC39A4-209ENST00000532718 SPATA31A6Q5VVP1 1343 aa22.9■■□□□ 1.26
SLC39A4-209ENST00000532718 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
SLC39A4-209ENST00000532718 NRXN3Q9Y4C0 1643 aa22.9■■□□□ 1.26
SLC39A4-209ENST00000532718 DCCP43146 1447 aa22.89■■□□□ 1.25
SLC39A4-209ENST00000532718 METP08581 1390 aa22.89■■□□□ 1.25
SLC39A4-209ENST00000532718 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
SLC39A4-209ENST00000532718 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
SLC39A4-209ENST00000532718 BRINP3Q76B58 766 aa22.87■■□□□ 1.25
SLC39A4-209ENST00000532718 XRN1Q8IZH2 1706 aaKnown RBP22.87■■□□□ 1.25
SLC39A4-209ENST00000532718 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
SLC39A4-209ENST00000532718 AHDC1Q5TGY3 1603 aaPredicted RBP22.86■■□□□ 1.25
SLC39A4-209ENST00000532718 HFM1A2PYH4 1435 aa22.86■■□□□ 1.25
SLC39A4-209ENST00000532718 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
SLC39A4-209ENST00000532718 ZNF772Q68DY9 489 aaPredicted RBP22.81■■□□□ 1.24
SLC39A4-209ENST00000532718 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
SLC39A4-209ENST00000532718 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
SLC39A4-209ENST00000532718 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
SLC39A4-209ENST00000532718 MST1RQ04912 1400 aa22.8■■□□□ 1.24
SLC39A4-209ENST00000532718 ADGRL3Q9HAR2 1447 aa22.8■■□□□ 1.24
SLC39A4-209ENST00000532718 SHPRHQ149N8 1683 aa22.8■■□□□ 1.24
SLC39A4-209ENST00000532718 ASXL1Q8IXJ9 1541 aa22.79■■□□□ 1.24
SLC39A4-209ENST00000532718 LRRC59Q96AG4 307 aaKnown RBP22.78■■□□□ 1.24
SLC39A4-209ENST00000532718 LRP6O75581 1613 aa22.78■■□□□ 1.24
SLC39A4-209ENST00000532718 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
SLC39A4-209ENST00000532718 FOXD1Q16676 465 aa22.73■■□□□ 1.23
SLC39A4-209ENST00000532718 NALCNQ8IZF0 1738 aa22.72■■□□□ 1.23
SLC39A4-209ENST00000532718 PTCH1Q13635 1447 aa22.72■■□□□ 1.23
SLC39A4-209ENST00000532718 NHSL1Q5SYE7 1610 aa22.71■■□□□ 1.23
SLC39A4-209ENST00000532718 DDX17Q92841 729 aaKnown RBP22.7■■□□□ 1.22
SLC39A4-209ENST00000532718 CCDC144AA2RUR9 1427 aa22.7■■□□□ 1.22
SLC39A4-209ENST00000532718 PPLO60437 1756 aa22.69■■□□□ 1.22
SLC39A4-209ENST00000532718 ROBO2Q9HCK4 1378 aa22.69■■□□□ 1.22
SLC39A4-209ENST00000532718 RXRBP28702 533 aa22.69■■□□□ 1.22
SLC39A4-209ENST00000532718 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
SLC39A4-209ENST00000532718 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
SLC39A4-209ENST00000532718 SETD1AO15047 1707 aaKnown RBP22.68■■□□□ 1.22
SLC39A4-209ENST00000532718 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
SLC39A4-209ENST00000532718 AFF2P51816 1311 aa22.66■■□□□ 1.22
SLC39A4-209ENST00000532718 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
SLC39A4-209ENST00000532718 ACIN1Q9UKV3 1341 aaKnown RBP22.64■■□□□ 1.22
SLC39A4-209ENST00000532718 C8orf37Q96NL8 207 aa22.64■■□□□ 1.21
SLC39A4-209ENST00000532718 ORAI2Q96SN7 254 aa22.64■■□□□ 1.21
SLC39A4-209ENST00000532718 PRAG1Q86YV5 1406 aa22.63■■□□□ 1.21
SLC39A4-209ENST00000532718 ANKRD30BQ9BXX2 1392 aa22.63■■□□□ 1.21
SLC39A4-209ENST00000532718 ADGRF5Q8IZF2 1346 aa22.62■■□□□ 1.21
SLC39A4-209ENST00000532718 STK26Q9P289 416 aa22.62■■□□□ 1.21
SLC39A4-209ENST00000532718 NGLY1Q96IV0 654 aa22.6■■□□□ 1.21
SLC39A4-209ENST00000532718 ADAMTS2O95450 1211 aa22.59■■□□□ 1.21
SLC39A4-209ENST00000532718 ESCO1Q5FWF5 840 aa22.59■■□□□ 1.21
SLC39A4-209ENST00000532718 SOS2Q07890 1332 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms