RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RAPGEF3O95398 923 aa18.33■□□□□ 0.53
PCDHA9-202ENST00000532602 RILPL2Q969X0 211 aa18.33■□□□□ 0.53
PCDHA9-202ENST00000532602 CSPP1Q1MSJ5 1256 aa18.33■□□□□ 0.52
PCDHA9-202ENST00000532602 CHMP4CQ96CF2 233 aa18.33■□□□□ 0.52
PCDHA9-202ENST00000532602 RASSF8Q8NHQ8 419 aa18.32■□□□□ 0.52
PCDHA9-202ENST00000532602 CFAP70Q5T0N1 1121 aa18.32■□□□□ 0.52
PCDHA9-202ENST00000532602 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
PCDHA9-202ENST00000532602 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
PCDHA9-202ENST00000532602 NEXNQ0ZGT2 675 aa18.32■□□□□ 0.52
PCDHA9-202ENST00000532602 GZF1Q9H116 711 aaPredicted RBP18.32■□□□□ 0.52
PCDHA9-202ENST00000532602 ANKRD45Q5TZF3 282 aa18.31■□□□□ 0.52
PCDHA9-202ENST00000532602 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
PCDHA9-202ENST00000532602 SCAPERQ9BY12 1400 aa18.31■□□□□ 0.52
PCDHA9-202ENST00000532602 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
PCDHA9-202ENST00000532602 STAC3Q96MF2 364 aa18.3■□□□□ 0.52
PCDHA9-202ENST00000532602 LRRFIP1Q32MZ4 808 aaKnown RBP18.3■□□□□ 0.52
PCDHA9-202ENST00000532602 COG6Q9Y2V7 657 aa18.3■□□□□ 0.52
PCDHA9-202ENST00000532602 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
PCDHA9-202ENST00000532602 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
PCDHA9-202ENST00000532602 CRBNQ96SW2 442 aa18.3■□□□□ 0.52
PCDHA9-202ENST00000532602 E9PSI1 815 aa18.28■□□□□ 0.52
PCDHA9-202ENST00000532602 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
PCDHA9-202ENST00000532602 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
PCDHA9-202ENST00000532602 NLRP2Q9NX02 1062 aa18.28■□□□□ 0.52
PCDHA9-202ENST00000532602 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
PCDHA9-202ENST00000532602 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
PCDHA9-202ENST00000532602 KLHL34Q8N239 644 aa18.27■□□□□ 0.51
PCDHA9-202ENST00000532602 C9orf78Q9NZ63 289 aaPredicted RBP18.27■□□□□ 0.51
PCDHA9-202ENST00000532602 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.51
PCDHA9-202ENST00000532602 MARCH6O60337 910 aa18.26■□□□□ 0.51
PCDHA9-202ENST00000532602 NLRP6P59044 892 aa18.26■□□□□ 0.51
PCDHA9-202ENST00000532602 KIF16BQ96L93 1317 aa18.26■□□□□ 0.51
PCDHA9-202ENST00000532602 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
PCDHA9-202ENST00000532602 PRAM1Q96QH2 718 aa18.26■□□□□ 0.51
PCDHA9-202ENST00000532602 ST18O60284 1047 aa18.26■□□□□ 0.51
PCDHA9-202ENST00000532602 HECW1Q76N89 1606 aa18.25■□□□□ 0.51
PCDHA9-202ENST00000532602 C9orf84Q5VXU9 1444 aa18.25■□□□□ 0.51
PCDHA9-202ENST00000532602 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
PCDHA9-202ENST00000532602 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
PCDHA9-202ENST00000532602 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
PCDHA9-202ENST00000532602 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
PCDHA9-202ENST00000532602 PROSER2Q86WR7 435 aaPredicted RBP18.24■□□□□ 0.51
PCDHA9-202ENST00000532602 AIMP1Q12904 312 aaKnown RBP18.24■□□□□ 0.51
PCDHA9-202ENST00000532602 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
PCDHA9-202ENST00000532602 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
PCDHA9-202ENST00000532602 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
PCDHA9-202ENST00000532602 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
PCDHA9-202ENST00000532602 AMOTL1Q8IY63 956 aa18.23■□□□□ 0.51
PCDHA9-202ENST00000532602 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
PCDHA9-202ENST00000532602 DDX58O95786 925 aaKnown RBP18.22■□□□□ 0.51
PCDHA9-202ENST00000532602 RRP1P56182 461 aaKnown RBP18.22■□□□□ 0.51
PCDHA9-202ENST00000532602 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
PCDHA9-202ENST00000532602 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
PCDHA9-202ENST00000532602 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
PCDHA9-202ENST00000532602 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
PCDHA9-202ENST00000532602 VPS53Q5VIR6 699 aa18.21■□□□□ 0.5
PCDHA9-202ENST00000532602 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
PCDHA9-202ENST00000532602 RRBP1Q9P2E9 1410 aaKnown RBP18.2■□□□□ 0.5
PCDHA9-202ENST00000532602 RAD21O60216 631 aa18.2■□□□□ 0.5
PCDHA9-202ENST00000532602 SF3A1Q15459 793 aaKnown RBP18.2■□□□□ 0.5
PCDHA9-202ENST00000532602 EFCAB5A4FU69 1503 aa18.2■□□□□ 0.5
PCDHA9-202ENST00000532602 AKAP17AQ02040 695 aaKnown RBP18.2■□□□□ 0.5
PCDHA9-202ENST00000532602 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
PCDHA9-202ENST00000532602 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
PCDHA9-202ENST00000532602 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
PCDHA9-202ENST00000532602 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
PCDHA9-202ENST00000532602 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
PCDHA9-202ENST00000532602 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
PCDHA9-202ENST00000532602 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
PCDHA9-202ENST00000532602 TRIM34Q9BYJ4 488 aa18.18■□□□□ 0.5
PCDHA9-202ENST00000532602 MTHFSP49914 203 aa18.17■□□□□ 0.5
PCDHA9-202ENST00000532602 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
PCDHA9-202ENST00000532602 CREBRFQ8IUR6 639 aa18.17■□□□□ 0.5
PCDHA9-202ENST00000532602 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
PCDHA9-202ENST00000532602 FOXD4L6Q3SYB3 417 aaPredicted RBP18.17■□□□□ 0.5
PCDHA9-202ENST00000532602 FOXD4L3Q6VB84 417 aaPredicted RBP18.17■□□□□ 0.5
PCDHA9-202ENST00000532602 CDK19Q9BWU1 502 aa18.16■□□□□ 0.5
PCDHA9-202ENST00000532602 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
PCDHA9-202ENST00000532602 RUFY2Q8WXA3 655 aa18.16■□□□□ 0.5
PCDHA9-202ENST00000532602 FAM177BA6PVY3 158 aa18.16■□□□□ 0.5
PCDHA9-202ENST00000532602 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
PCDHA9-202ENST00000532602 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
PCDHA9-202ENST00000532602 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
PCDHA9-202ENST00000532602 PIP4K2BP78356 416 aa18.15■□□□□ 0.5
PCDHA9-202ENST00000532602 DIAPH3Q9NSV4 1193 aa18.15■□□□□ 0.5
PCDHA9-202ENST00000532602 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
PCDHA9-202ENST00000532602 PHF14O94880 888 aa18.15■□□□□ 0.5
PCDHA9-202ENST00000532602 XPCQ01831 940 aaPredicted RBP18.15■□□□□ 0.5
PCDHA9-202ENST00000532602 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
PCDHA9-202ENST00000532602 SLC4A3P48751 1232 aa18.14■□□□□ 0.49
PCDHA9-202ENST00000532602 VPS37DQ86XT2 251 aa18.14■□□□□ 0.49
PCDHA9-202ENST00000532602 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
PCDHA9-202ENST00000532602 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
PCDHA9-202ENST00000532602 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
PCDHA9-202ENST00000532602 WASHC2AQ641Q2 1341 aa18.13■□□□□ 0.49
PCDHA9-202ENST00000532602 FAM184AQ8NB25 1140 aa18.13■□□□□ 0.49
PCDHA9-202ENST00000532602 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
PCDHA9-202ENST00000532602 H3BQV1 296 aa18.13■□□□□ 0.49
PCDHA9-202ENST00000532602 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
PCDHA9-202ENST00000532602 ROCK1Q13464 1354 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms