RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 KCNA6P17658 529 aa25.1■■□□□ 1.61
CAVIN3-204ENST00000532354 TMEM131LA2VDJ0 1609 aa25.09■■□□□ 1.61
CAVIN3-204ENST00000532354 HDGFP51858 240 aaKnown RBP25.08■■□□□ 1.61
CAVIN3-204ENST00000532354 RIMS2Q9UQ26 1411 aa25.08■■□□□ 1.61
CAVIN3-204ENST00000532354 CHGAP10645 457 aaKnown RBP25.07■■□□□ 1.6
CAVIN3-204ENST00000532354 BCANQ96GW7 911 aa25.07■■□□□ 1.6
CAVIN3-204ENST00000532354 MYO5BQ9ULV0 1848 aa25.07■■□□□ 1.6
CAVIN3-204ENST00000532354 PLEKHG1Q9ULL1 1385 aa25.05■■□□□ 1.6
CAVIN3-204ENST00000532354 SENP3Q9H4L4 574 aaPredicted RBP25.04■■□□□ 1.6
CAVIN3-204ENST00000532354 XIRP1Q702N8 1843 aaKnown RBP25.04■■□□□ 1.6
CAVIN3-204ENST00000532354 PPP1R15AO75807 674 aaPredicted RBP25.03■■□□□ 1.6
CAVIN3-204ENST00000532354 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
CAVIN3-204ENST00000532354 TMEM94Q12767 1356 aa25.02■■□□□ 1.6
CAVIN3-204ENST00000532354 NAIPQ13075 1403 aa25.02■■□□□ 1.6
CAVIN3-204ENST00000532354 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
CAVIN3-204ENST00000532354 NUTM2DQ5VT03 806 aaPredicted RBP24.99■■□□□ 1.59
CAVIN3-204ENST00000532354 TBX22Q9Y458 520 aa24.99■■□□□ 1.59
CAVIN3-204ENST00000532354 RBM33Q96EV2 1170 aaKnown RBP24.97■■□□□ 1.59
CAVIN3-204ENST00000532354 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
CAVIN3-204ENST00000532354 NKTRP30414 1462 aaKnown RBP24.96■■□□□ 1.59
CAVIN3-204ENST00000532354 ADAMTS13Q76LX8 1427 aa24.93■■□□□ 1.58
CAVIN3-204ENST00000532354 HFM1A2PYH4 1435 aa24.92■■□□□ 1.58
CAVIN3-204ENST00000532354 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
CAVIN3-204ENST00000532354 CHD2O14647 1828 aaKnown RBP24.91■■□□□ 1.58
CAVIN3-204ENST00000532354 FAM135BQ49AJ0 1406 aa24.9■■□□□ 1.58
CAVIN3-204ENST00000532354 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
CAVIN3-204ENST00000532354 MED1Q15648 1581 aaPredicted RBP24.88■■□□□ 1.57
CAVIN3-204ENST00000532354 DIP2AQ14689 1571 aa24.86■■□□□ 1.57
CAVIN3-204ENST00000532354 PIK3R4Q99570 1358 aa24.86■■□□□ 1.57
CAVIN3-204ENST00000532354 MSH6P52701 1360 aa24.85■■□□□ 1.57
CAVIN3-204ENST00000532354 ZNF326Q5BKZ1 582 aaKnown RBP24.85■■□□□ 1.57
CAVIN3-204ENST00000532354 TRPM2O94759 1503 aa24.83■■□□□ 1.57
CAVIN3-204ENST00000532354 CLTCL1P53675 1640 aa24.83■■□□□ 1.56
CAVIN3-204ENST00000532354 NCOA3Q9Y6Q9 1424 aa24.82■■□□□ 1.56
CAVIN3-204ENST00000532354 SLC4A1APQ9BWU0 796 aaKnown RBP24.81■■□□□ 1.56
CAVIN3-204ENST00000532354 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
CAVIN3-204ENST00000532354 AMOTL2Q9Y2J4 779 aa24.8■■□□□ 1.56
CAVIN3-204ENST00000532354 PTPRUQ92729 1446 aa24.79■■□□□ 1.56
CAVIN3-204ENST00000532354 ROBO1Q9Y6N7 1651 aa24.78■■□□□ 1.56
CAVIN3-204ENST00000532354 SETBP1Q9Y6X0 1596 aa24.77■■□□□ 1.56
CAVIN3-204ENST00000532354 NRXN3Q9Y4C0 1643 aa24.77■■□□□ 1.56
CAVIN3-204ENST00000532354 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
CAVIN3-204ENST00000532354 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
CAVIN3-204ENST00000532354 C14orf37Q86TY3 774 aa24.75■■□□□ 1.55
CAVIN3-204ENST00000532354 C19orf44Q9H6X5 657 aa24.75■■□□□ 1.55
CAVIN3-204ENST00000532354 KIF1BO60333 1816 aa24.72■■□□□ 1.55
CAVIN3-204ENST00000532354 METP08581 1390 aa24.72■■□□□ 1.55
CAVIN3-204ENST00000532354 CADPS2Q86UW7 1296 aa24.71■■□□□ 1.55
CAVIN3-204ENST00000532354 FOXD1Q16676 465 aa24.7■■□□□ 1.54
CAVIN3-204ENST00000532354 VGFO15240 615 aaPredicted RBP24.69■■□□□ 1.54
CAVIN3-204ENST00000532354 ATF3P18847 181 aa24.69■■□□□ 1.54
CAVIN3-204ENST00000532354 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.69■■□□□ 1.54
CAVIN3-204ENST00000532354 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
CAVIN3-204ENST00000532354 XRN1Q8IZH2 1706 aaKnown RBP24.68■■□□□ 1.54
CAVIN3-204ENST00000532354 MPHOSPH9Q99550 1183 aa24.66■■□□□ 1.54
CAVIN3-204ENST00000532354 RGS17Q9UGC6 210 aaPredicted RBP24.62■■□□□ 1.53
CAVIN3-204ENST00000532354 PHLPP1O60346 1717 aa24.61■■□□□ 1.53
CAVIN3-204ENST00000532354 DCCP43146 1447 aa24.61■■□□□ 1.53
CAVIN3-204ENST00000532354 CCDC144AA2RUR9 1427 aa24.59■■□□□ 1.53
CAVIN3-204ENST00000532354 JCADQ9P266 1359 aa24.58■■□□□ 1.53
CAVIN3-204ENST00000532354 BRINP3Q76B58 766 aa24.58■■□□□ 1.53
CAVIN3-204ENST00000532354 SETD5Q9C0A6 1442 aa24.58■■□□□ 1.53
CAVIN3-204ENST00000532354 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
CAVIN3-204ENST00000532354 COL16A1Q07092 1604 aaPredicted RBP24.57■■□□□ 1.52
CAVIN3-204ENST00000532354 PPLO60437 1756 aa24.56■■□□□ 1.52
CAVIN3-204ENST00000532354 ADGRL3Q9HAR2 1447 aa24.55■■□□□ 1.52
CAVIN3-204ENST00000532354 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
CAVIN3-204ENST00000532354 MST1RQ04912 1400 aa24.54■■□□□ 1.52
CAVIN3-204ENST00000532354 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
CAVIN3-204ENST00000532354 RGL3Q3MIN7 710 aa24.54■■□□□ 1.52
CAVIN3-204ENST00000532354 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
CAVIN3-204ENST00000532354 ADGRF5Q8IZF2 1346 aa24.52■■□□□ 1.52
CAVIN3-204ENST00000532354 ROBO2Q9HCK4 1378 aa24.52■■□□□ 1.52
CAVIN3-204ENST00000532354 PTCH1Q13635 1447 aa24.52■■□□□ 1.52
CAVIN3-204ENST00000532354 PRAG1Q86YV5 1406 aa24.5■■□□□ 1.51
CAVIN3-204ENST00000532354 POTEAQ6S8J7 498 aa24.48■■□□□ 1.51
CAVIN3-204ENST00000532354 ASXL1Q8IXJ9 1541 aa24.48■■□□□ 1.51
CAVIN3-204ENST00000532354 NALCNQ8IZF0 1738 aa24.48■■□□□ 1.51
CAVIN3-204ENST00000532354 ANKRD30BQ9BXX2 1392 aa24.48■■□□□ 1.51
CAVIN3-204ENST00000532354 RAB3GAP2Q9H2M9 1393 aa24.47■■□□□ 1.51
CAVIN3-204ENST00000532354 SPATA31A6Q5VVP1 1343 aa24.47■■□□□ 1.51
CAVIN3-204ENST00000532354 IFT172Q9UG01 1749 aa24.43■■□□□ 1.5
CAVIN3-204ENST00000532354 LRP6O75581 1613 aa24.43■■□□□ 1.5
CAVIN3-204ENST00000532354 C1orf167Q5SNV9 1468 aa24.42■■□□□ 1.5
CAVIN3-204ENST00000532354 SHPRHQ149N8 1683 aa24.41■■□□□ 1.5
CAVIN3-204ENST00000532354 DDX17Q92841 729 aaKnown RBP24.41■■□□□ 1.5
CAVIN3-204ENST00000532354 NHSL1Q5SYE7 1610 aa24.4■■□□□ 1.5
CAVIN3-204ENST00000532354 PIK3C2GO75747 1445 aa24.39■■□□□ 1.5
CAVIN3-204ENST00000532354 TMEM132EQ6IEE7 984 aa24.39■■□□□ 1.49
CAVIN3-204ENST00000532354 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.49
CAVIN3-204ENST00000532354 STK26Q9P289 416 aa24.39■■□□□ 1.49
CAVIN3-204ENST00000532354 ORAI2Q96SN7 254 aa24.38■■□□□ 1.49
CAVIN3-204ENST00000532354 LRPPRCP42704 1394 aaKnown RBP24.38■■□□□ 1.49
CAVIN3-204ENST00000532354 MEX3CQ5U5Q3 659 aaKnown RBP24.37■■□□□ 1.49
CAVIN3-204ENST00000532354 WAPLQ7Z5K2 1190 aa24.36■■□□□ 1.49
CAVIN3-204ENST00000532354 ABCC11Q96J66 1382 aa24.36■■□□□ 1.49
CAVIN3-204ENST00000532354 TECPR2O15040 1411 aa24.35■■□□□ 1.49
CAVIN3-204ENST00000532354 NUTM2BA6NNL0 878 aaPredicted RBP24.34■■□□□ 1.49
CAVIN3-204ENST00000532354 NUTM2EB1AL46 878 aaPredicted RBP24.34■■□□□ 1.49
CAVIN3-204ENST00000532354 HRCP23327 699 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms