RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 LRRC7Q96NW7 1537 aa23.51■■□□□ 1.35
DEPDC7-204ENST00000532078 TXNDC2Q86VQ3 553 aa23.51■■□□□ 1.35
DEPDC7-204ENST00000532078 ZNF219Q9P2Y4 722 aaPredicted RBP23.51■■□□□ 1.35
DEPDC7-204ENST00000532078 EID1Q9Y6B2 187 aa23.51■■□□□ 1.35
DEPDC7-204ENST00000532078 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
DEPDC7-204ENST00000532078 LTKP29376 864 aa23.5■■□□□ 1.35
DEPDC7-204ENST00000532078 TMEM2Q9UHN6 1383 aa23.5■■□□□ 1.35
DEPDC7-204ENST00000532078 ILDR2Q71H61 639 aa23.49■■□□□ 1.35
DEPDC7-204ENST00000532078 STAG3Q9UJ98 1225 aa23.49■■□□□ 1.35
DEPDC7-204ENST00000532078 NOS1P29475 1434 aa23.49■■□□□ 1.35
DEPDC7-204ENST00000532078 ALKQ9UM73 1620 aa23.48■■□□□ 1.35
DEPDC7-204ENST00000532078 RPRD2Q5VT52 1461 aaKnown RBP23.47■■□□□ 1.35
DEPDC7-204ENST00000532078 ADGRB3O60242 1522 aa23.47■■□□□ 1.35
DEPDC7-204ENST00000532078 HSPA1LP34931 641 aa23.46■■□□□ 1.35
DEPDC7-204ENST00000532078 TET3O43151 1660 aa23.44■■□□□ 1.34
DEPDC7-204ENST00000532078 IDI1Q13907 227 aa23.44■■□□□ 1.34
DEPDC7-204ENST00000532078 UNC13BO14795 1591 aa23.43■■□□□ 1.34
DEPDC7-204ENST00000532078 GCC2Q8IWJ2 1684 aa23.41■■□□□ 1.34
DEPDC7-204ENST00000532078 ATXN8OSP0DMR3 200 aa23.4■■□□□ 1.34
DEPDC7-204ENST00000532078 SLC52A1Q9NWF4 448 aa23.4■■□□□ 1.34
DEPDC7-204ENST00000532078 SOCS7O14512 581 aa23.39■■□□□ 1.33
DEPDC7-204ENST00000532078 MED1Q15648 1581 aaPredicted RBP23.39■■□□□ 1.33
DEPDC7-204ENST00000532078 ROCK1Q13464 1354 aa23.39■■□□□ 1.33
DEPDC7-204ENST00000532078 XIRP1Q702N8 1843 aaKnown RBP23.36■■□□□ 1.33
DEPDC7-204ENST00000532078 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.33
DEPDC7-204ENST00000532078 ATF5Q9Y2D1 282 aaPredicted RBP23.32■■□□□ 1.32
DEPDC7-204ENST00000532078 E9PCH4 1651 aa23.32■■□□□ 1.32
DEPDC7-204ENST00000532078 DSG3P32926 999 aa23.31■■□□□ 1.32
DEPDC7-204ENST00000532078 MYO5BQ9ULV0 1848 aa23.31■■□□□ 1.32
DEPDC7-204ENST00000532078 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
DEPDC7-204ENST00000532078 TMEM131LA2VDJ0 1609 aa23.3■■□□□ 1.32
DEPDC7-204ENST00000532078 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
DEPDC7-204ENST00000532078 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
DEPDC7-204ENST00000532078 KCNA6P17658 529 aa23.29■■□□□ 1.32
DEPDC7-204ENST00000532078 SLC26A8Q96RN1 970 aa23.29■■□□□ 1.32
DEPDC7-204ENST00000532078 TMEM94Q12767 1356 aa23.28■■□□□ 1.32
DEPDC7-204ENST00000532078 RIMS2Q9UQ26 1411 aa23.27■■□□□ 1.32
DEPDC7-204ENST00000532078 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.31
DEPDC7-204ENST00000532078 BCANQ96GW7 911 aa23.26■■□□□ 1.31
DEPDC7-204ENST00000532078 PPP1R15AO75807 674 aaPredicted RBP23.25■■□□□ 1.31
DEPDC7-204ENST00000532078 HDGFP51858 240 aaKnown RBP23.25■■□□□ 1.31
DEPDC7-204ENST00000532078 ITGAEP38570 1179 aa23.24■■□□□ 1.31
DEPDC7-204ENST00000532078 NUP155O75694 1391 aa23.23■■□□□ 1.31
DEPDC7-204ENST00000532078 PROSER2Q86WR7 435 aaPredicted RBP23.22■■□□□ 1.31
DEPDC7-204ENST00000532078 FAM135BQ49AJ0 1406 aa23.21■■□□□ 1.31
DEPDC7-204ENST00000532078 CHGAP10645 457 aaKnown RBP23.2■■□□□ 1.3
DEPDC7-204ENST00000532078 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
DEPDC7-204ENST00000532078 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.2■■□□□ 1.3
DEPDC7-204ENST00000532078 CHD2O14647 1828 aaKnown RBP23.19■■□□□ 1.3
DEPDC7-204ENST00000532078 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
DEPDC7-204ENST00000532078 ABCB7O75027 752 aa23.17■■□□□ 1.3
DEPDC7-204ENST00000532078 MSH6P52701 1360 aa23.16■■□□□ 1.3
DEPDC7-204ENST00000532078 ROBO1Q9Y6N7 1651 aa23.16■■□□□ 1.3
DEPDC7-204ENST00000532078 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
DEPDC7-204ENST00000532078 RBM33Q96EV2 1170 aaKnown RBP23.14■■□□□ 1.29
DEPDC7-204ENST00000532078 TBX22Q9Y458 520 aa23.14■■□□□ 1.29
DEPDC7-204ENST00000532078 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
DEPDC7-204ENST00000532078 ADAMTS13Q76LX8 1427 aa23.12■■□□□ 1.29
DEPDC7-204ENST00000532078 TRPM2O94759 1503 aa23.1■■□□□ 1.29
DEPDC7-204ENST00000532078 PIK3R4Q99570 1358 aa23.1■■□□□ 1.29
DEPDC7-204ENST00000532078 NCOA3Q9Y6Q9 1424 aa23.09■■□□□ 1.29
DEPDC7-204ENST00000532078 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
DEPDC7-204ENST00000532078 SLAIN2Q9P270 581 aa23.05■■□□□ 1.28
DEPDC7-204ENST00000532078 NAIPQ13075 1403 aa23.05■■□□□ 1.28
DEPDC7-204ENST00000532078 SETBP1Q9Y6X0 1596 aa23.04■■□□□ 1.28
DEPDC7-204ENST00000532078 PHLPP1O60346 1717 aa23.03■■□□□ 1.28
DEPDC7-204ENST00000532078 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
DEPDC7-204ENST00000532078 CLTCL1P53675 1640 aa23.02■■□□□ 1.28
DEPDC7-204ENST00000532078 NRXN3Q9Y4C0 1643 aa23.02■■□□□ 1.28
DEPDC7-204ENST00000532078 POLA2Q14181 598 aa23.02■■□□□ 1.28
DEPDC7-204ENST00000532078 SIPA1L2Q9P2F8 1722 aaPredicted RBP23■■□□□ 1.27
DEPDC7-204ENST00000532078 ZNF326Q5BKZ1 582 aaKnown RBP22.99■■□□□ 1.27
DEPDC7-204ENST00000532078 XRN1Q8IZH2 1706 aaKnown RBP22.99■■□□□ 1.27
DEPDC7-204ENST00000532078 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
DEPDC7-204ENST00000532078 PTPRUQ92729 1446 aa22.98■■□□□ 1.27
DEPDC7-204ENST00000532078 CADPS2Q86UW7 1296 aa22.97■■□□□ 1.27
DEPDC7-204ENST00000532078 C19orf44Q9H6X5 657 aa22.97■■□□□ 1.27
DEPDC7-204ENST00000532078 AMOTL2Q9Y2J4 779 aa22.97■■□□□ 1.27
DEPDC7-204ENST00000532078 NEXMIFQ5QGS0 1516 aa22.97■■□□□ 1.27
DEPDC7-204ENST00000532078 KIF1BO60333 1816 aa22.96■■□□□ 1.27
DEPDC7-204ENST00000532078 COL16A1Q07092 1604 aaPredicted RBP22.96■■□□□ 1.27
DEPDC7-204ENST00000532078 ATF3P18847 181 aa22.95■■□□□ 1.26
DEPDC7-204ENST00000532078 JCADQ9P266 1359 aa22.95■■□□□ 1.26
DEPDC7-204ENST00000532078 DCCP43146 1447 aa22.94■■□□□ 1.26
DEPDC7-204ENST00000532078 RGS17Q9UGC6 210 aaPredicted RBP22.94■■□□□ 1.26
DEPDC7-204ENST00000532078 AHDC1Q5TGY3 1603 aaPredicted RBP22.93■■□□□ 1.26
DEPDC7-204ENST00000532078 TRIM52Q96A61 297 aa22.9■■□□□ 1.26
DEPDC7-204ENST00000532078 METP08581 1390 aa22.89■■□□□ 1.26
DEPDC7-204ENST00000532078 SHPRHQ149N8 1683 aa22.85■■□□□ 1.25
DEPDC7-204ENST00000532078 ADGRL3Q9HAR2 1447 aa22.84■■□□□ 1.25
DEPDC7-204ENST00000532078 SPATA31A6Q5VVP1 1343 aa22.83■■□□□ 1.25
DEPDC7-204ENST00000532078 ASXL1Q8IXJ9 1541 aa22.83■■□□□ 1.25
DEPDC7-204ENST00000532078 BRINP3Q76B58 766 aa22.83■■□□□ 1.25
DEPDC7-204ENST00000532078 MST1RQ04912 1400 aa22.82■■□□□ 1.24
DEPDC7-204ENST00000532078 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
DEPDC7-204ENST00000532078 VGFO15240 615 aaPredicted RBP22.82■■□□□ 1.24
DEPDC7-204ENST00000532078 POTEAQ6S8J7 498 aa22.82■■□□□ 1.24
DEPDC7-204ENST00000532078 SETD1AO15047 1707 aaKnown RBP22.82■■□□□ 1.24
DEPDC7-204ENST00000532078 RPGRIP1LQ68CZ1 1315 aa22.81■■□□□ 1.24
DEPDC7-204ENST00000532078 LRP6O75581 1613 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms