RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
PPFIA1-220ENST00000532024 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
PPFIA1-220ENST00000532024 RPGRIP1LQ68CZ1 1315 aa17.21■□□□□ 0.35
PPFIA1-220ENST00000532024 TXNDC2Q86VQ3 553 aa17.21■□□□□ 0.35
PPFIA1-220ENST00000532024 ZFYVE9O95405 1425 aa17.21■□□□□ 0.34
PPFIA1-220ENST00000532024 STRCQ7RTU9 1775 aa17.2■□□□□ 0.34
PPFIA1-220ENST00000532024 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
PPFIA1-220ENST00000532024 MED14O60244 1454 aa17.19■□□□□ 0.34
PPFIA1-220ENST00000532024 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
PPFIA1-220ENST00000532024 IQGAP1P46940 1657 aa17.18■□□□□ 0.34
PPFIA1-220ENST00000532024 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
PPFIA1-220ENST00000532024 NEXMIFQ5QGS0 1516 aa17.17■□□□□ 0.34
PPFIA1-220ENST00000532024 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
PPFIA1-220ENST00000532024 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
PPFIA1-220ENST00000532024 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
PPFIA1-220ENST00000532024 BCANQ96GW7 911 aa17.16■□□□□ 0.34
PPFIA1-220ENST00000532024 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
PPFIA1-220ENST00000532024 LTKP29376 864 aa17.15■□□□□ 0.34
PPFIA1-220ENST00000532024 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
PPFIA1-220ENST00000532024 PPLO60437 1756 aa17.15■□□□□ 0.34
PPFIA1-220ENST00000532024 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
PPFIA1-220ENST00000532024 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
PPFIA1-220ENST00000532024 DIP2AQ14689 1571 aa17.11■□□□□ 0.33
PPFIA1-220ENST00000532024 SOCS7O14512 581 aa17.11■□□□□ 0.33
PPFIA1-220ENST00000532024 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
PPFIA1-220ENST00000532024 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
PPFIA1-220ENST00000532024 MYOM2P54296 1465 aa17.11■□□□□ 0.33
PPFIA1-220ENST00000532024 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
PPFIA1-220ENST00000532024 SIN3AQ96ST3 1273 aa17.09■□□□□ 0.33
PPFIA1-220ENST00000532024 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
PPFIA1-220ENST00000532024 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
PPFIA1-220ENST00000532024 SLC26A8Q96RN1 970 aa17.05■□□□□ 0.32
PPFIA1-220ENST00000532024 LAMC1P11047 1609 aa17.05■□□□□ 0.32
PPFIA1-220ENST00000532024 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
PPFIA1-220ENST00000532024 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
PPFIA1-220ENST00000532024 PIK3R4Q99570 1358 aa17.03■□□□□ 0.32
PPFIA1-220ENST00000532024 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
PPFIA1-220ENST00000532024 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
PPFIA1-220ENST00000532024 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
PPFIA1-220ENST00000532024 KDM2AQ9Y2K7 1162 aa17.03■□□□□ 0.32
PPFIA1-220ENST00000532024 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
PPFIA1-220ENST00000532024 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
PPFIA1-220ENST00000532024 DISP3Q9P2K9 1392 aa17.02■□□□□ 0.32
PPFIA1-220ENST00000532024 ILDR2Q71H61 639 aa17.02■□□□□ 0.32
PPFIA1-220ENST00000532024 ALKQ9UM73 1620 aa17.01■□□□□ 0.31
PPFIA1-220ENST00000532024 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
PPFIA1-220ENST00000532024 TIMELESSQ9UNS1 1208 aa17■□□□□ 0.31
PPFIA1-220ENST00000532024 CERKQ8TCT0 537 aa16.99■□□□□ 0.31
PPFIA1-220ENST00000532024 CPS1P31327 1500 aa16.99■□□□□ 0.31
PPFIA1-220ENST00000532024 ZNF335Q9H4Z2 1342 aaPredicted RBP16.98■□□□□ 0.31
PPFIA1-220ENST00000532024 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
PPFIA1-220ENST00000532024 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
PPFIA1-220ENST00000532024 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
PPFIA1-220ENST00000532024 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
PPFIA1-220ENST00000532024 KCNA6P17658 529 aa16.96■□□□□ 0.31
PPFIA1-220ENST00000532024 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
PPFIA1-220ENST00000532024 KIAA1210Q9ULL0 1709 aa16.96■□□□□ 0.3
PPFIA1-220ENST00000532024 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
PPFIA1-220ENST00000532024 METP08581 1390 aa16.94■□□□□ 0.3
PPFIA1-220ENST00000532024 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
PPFIA1-220ENST00000532024 CFAP70Q5T0N1 1121 aa16.93■□□□□ 0.3
PPFIA1-220ENST00000532024 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
PPFIA1-220ENST00000532024 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
PPFIA1-220ENST00000532024 STRCP1A6NGW2 1772 aa16.9■□□□□ 0.3
PPFIA1-220ENST00000532024 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
PPFIA1-220ENST00000532024 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.3
PPFIA1-220ENST00000532024 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
PPFIA1-220ENST00000532024 PTPRUQ92729 1446 aa16.89■□□□□ 0.29
PPFIA1-220ENST00000532024 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
PPFIA1-220ENST00000532024 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
PPFIA1-220ENST00000532024 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
PPFIA1-220ENST00000532024 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
PPFIA1-220ENST00000532024 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
PPFIA1-220ENST00000532024 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
PPFIA1-220ENST00000532024 ADGRB1O14514 1584 aa16.88■□□□□ 0.29
PPFIA1-220ENST00000532024 TECPR2O15040 1411 aa16.87■□□□□ 0.29
PPFIA1-220ENST00000532024 LRRC7Q96NW7 1537 aa16.87■□□□□ 0.29
PPFIA1-220ENST00000532024 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
PPFIA1-220ENST00000532024 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
PPFIA1-220ENST00000532024 STK26Q9P289 416 aa16.86■□□□□ 0.29
PPFIA1-220ENST00000532024 NCOA3Q9Y6Q9 1424 aa16.86■□□□□ 0.29
PPFIA1-220ENST00000532024 RALGAPBQ86X10 1494 aa16.86■□□□□ 0.29
PPFIA1-220ENST00000532024 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
PPFIA1-220ENST00000532024 TMEM94Q12767 1356 aa16.85■□□□□ 0.29
PPFIA1-220ENST00000532024 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
PPFIA1-220ENST00000532024 FAM135BQ49AJ0 1406 aa16.83■□□□□ 0.28
PPFIA1-220ENST00000532024 MSH6P52701 1360 aa16.82■□□□□ 0.28
PPFIA1-220ENST00000532024 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
PPFIA1-220ENST00000532024 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
PPFIA1-220ENST00000532024 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
PPFIA1-220ENST00000532024 EIF3AQ14152 1382 aaKnown RBP16.81■□□□□ 0.28
PPFIA1-220ENST00000532024 POGKQ9P215 609 aa16.81■□□□□ 0.28
PPFIA1-220ENST00000532024 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
PPFIA1-220ENST00000532024 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
PPFIA1-220ENST00000532024 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
PPFIA1-220ENST00000532024 ADGRL3Q9HAR2 1447 aa16.79■□□□□ 0.28
PPFIA1-220ENST00000532024 CARD11Q9BXL7 1154 aa16.79■□□□□ 0.28
PPFIA1-220ENST00000532024 XIRP1Q702N8 1843 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-220ENST00000532024 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
PPFIA1-220ENST00000532024 DCCP43146 1447 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms