RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
VPS26B-206ENST00000531741 SLC24A1O60721 1099 aa22.49■■□□□ 1.19
VPS26B-206ENST00000531741 NPC1L1Q9UHC9 1359 aa22.49■■□□□ 1.19
VPS26B-206ENST00000531741 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
VPS26B-206ENST00000531741 KIF1BO60333 1816 aa22.49■■□□□ 1.19
VPS26B-206ENST00000531741 MYOM1P52179 1685 aa22.48■■□□□ 1.19
VPS26B-206ENST00000531741 ZNF518AQ6AHZ1 1483 aa22.48■■□□□ 1.19
VPS26B-206ENST00000531741 MSH5O43196 834 aa22.48■■□□□ 1.19
VPS26B-206ENST00000531741 RCAN3Q9UKA8 241 aa22.48■■□□□ 1.19
VPS26B-206ENST00000531741 CFAP74Q9C0B2 1584 aa22.46■■□□□ 1.19
VPS26B-206ENST00000531741 KNSTRNQ9Y448 316 aa22.46■■□□□ 1.19
VPS26B-206ENST00000531741 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
VPS26B-206ENST00000531741 AMER1Q5JTC6 1135 aaPredicted RBP22.45■■□□□ 1.18
VPS26B-206ENST00000531741 KDM5AP29375 1690 aaKnown RBP22.45■■□□□ 1.18
VPS26B-206ENST00000531741 ABCA6Q8N139 1617 aa22.45■■□□□ 1.18
VPS26B-206ENST00000531741 SENP3-EIF4A1A0A087X0R7 540 aa22.45■■□□□ 1.18
VPS26B-206ENST00000531741 NRXN1Q9ULB1 1477 aa22.45■■□□□ 1.18
VPS26B-206ENST00000531741 PPRC1Q5VV67 1664 aaKnown RBP22.45■■□□□ 1.18
VPS26B-206ENST00000531741 PIK3C2GO75747 1445 aa22.43■■□□□ 1.18
VPS26B-206ENST00000531741 MYO3AQ8NEV4 1616 aa22.41■■□□□ 1.18
VPS26B-206ENST00000531741 UGGT1Q9NYU2 1555 aa22.4■■□□□ 1.18
VPS26B-206ENST00000531741 PPP2R1AP30153 589 aa22.4■■□□□ 1.18
VPS26B-206ENST00000531741 ADGRB3O60242 1522 aa22.39■■□□□ 1.18
VPS26B-206ENST00000531741 MROH2AA6NES4 1674 aa22.39■■□□□ 1.17
VPS26B-206ENST00000531741 MYT1LQ9UL68 1186 aa22.38■■□□□ 1.17
VPS26B-206ENST00000531741 MLH3Q9UHC1 1453 aa22.38■■□□□ 1.17
VPS26B-206ENST00000531741 SBNO2Q9Y2G9 1366 aa22.38■■□□□ 1.17
VPS26B-206ENST00000531741 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
VPS26B-206ENST00000531741 POGZQ7Z3K3 1410 aa22.38■■□□□ 1.17
VPS26B-206ENST00000531741 ERVK-7P63135 1459 aa22.36■■□□□ 1.17
VPS26B-206ENST00000531741 CDCA7LQ96GN5 454 aa22.36■■□□□ 1.17
VPS26B-206ENST00000531741 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
VPS26B-206ENST00000531741 ADAMTS8Q9UP79 889 aa22.35■■□□□ 1.17
VPS26B-206ENST00000531741 ADGRF5Q8IZF2 1346 aa22.34■■□□□ 1.17
VPS26B-206ENST00000531741 FRMPD1Q5SYB0 1578 aa22.34■■□□□ 1.17
VPS26B-206ENST00000531741 CFAP70Q5T0N1 1121 aa22.34■■□□□ 1.17
VPS26B-206ENST00000531741 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.17
VPS26B-206ENST00000531741 EXOC6Q8TAG9 804 aa22.32■■□□□ 1.16
VPS26B-206ENST00000531741 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
VPS26B-206ENST00000531741 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
VPS26B-206ENST00000531741 WDR43Q15061 677 aaKnown RBP eCLIP22.31■■□□□ 1.16
VPS26B-206ENST00000531741 PPLO60437 1756 aa22.3■■□□□ 1.16
VPS26B-206ENST00000531741 ZNF521Q96K83 1311 aa22.3■■□□□ 1.16
VPS26B-206ENST00000531741 NPATQ14207 1427 aa22.29■■□□□ 1.16
VPS26B-206ENST00000531741 NOS1P29475 1434 aa22.27■■□□□ 1.15
VPS26B-206ENST00000531741 ERICH6Q7L0X2 663 aa22.26■■□□□ 1.15
VPS26B-206ENST00000531741 OSCARQ8IYS5 282 aa22.26■■□□□ 1.15
VPS26B-206ENST00000531741 PLEKHH1Q9ULM0 1364 aa22.26■■□□□ 1.15
VPS26B-206ENST00000531741 RPGRIP1LQ68CZ1 1315 aa22.26■■□□□ 1.15
VPS26B-206ENST00000531741 ABCC3O15438 1527 aa22.25■■□□□ 1.15
VPS26B-206ENST00000531741 ZC3H13Q5T200 1668 aaKnown RBP22.25■■□□□ 1.15
VPS26B-206ENST00000531741 NEO1Q92859 1461 aa22.25■■□□□ 1.15
VPS26B-206ENST00000531741 TCERG1O14776 1098 aaKnown RBP22.23■■□□□ 1.15
VPS26B-206ENST00000531741 ADGRB1O14514 1584 aa22.23■■□□□ 1.15
VPS26B-206ENST00000531741 DUSP27Q5VZP5 1158 aa22.22■■□□□ 1.15
VPS26B-206ENST00000531741 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
VPS26B-206ENST00000531741 CENPJQ9HC77 1338 aaPredicted RBP22.21■■□□□ 1.15
VPS26B-206ENST00000531741 NGEFQ8N5V2 710 aa22.21■■□□□ 1.15
VPS26B-206ENST00000531741 CAMSAP1Q5T5Y3 1602 aa22.21■■□□□ 1.15
VPS26B-206ENST00000531741 GOLGA2Q08379 1002 aa22.2■■□□□ 1.14
VPS26B-206ENST00000531741 CARD14Q9BXL6 1004 aa22.2■■□□□ 1.14
VPS26B-206ENST00000531741 PIK3C2BO00750 1634 aa22.2■■□□□ 1.14
VPS26B-206ENST00000531741 QRICH2Q9H0J4 1663 aa22.19■■□□□ 1.14
VPS26B-206ENST00000531741 MS4A1P11836 297 aa22.19■■□□□ 1.14
VPS26B-206ENST00000531741 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
VPS26B-206ENST00000531741 USP32Q8NFA0 1604 aa22.17■■□□□ 1.14
VPS26B-206ENST00000531741 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
VPS26B-206ENST00000531741 PLIN1O60240 522 aa22.16■■□□□ 1.14
VPS26B-206ENST00000531741 ANP32AP39687 249 aaKnown RBP22.16■■□□□ 1.14
VPS26B-206ENST00000531741 SLFN5Q08AF3 891 aa22.16■■□□□ 1.14
VPS26B-206ENST00000531741 CRBNQ96SW2 442 aa22.15■■□□□ 1.14
VPS26B-206ENST00000531741 NOP58Q9Y2X3 529 aaKnown RBP22.15■■□□□ 1.14
VPS26B-206ENST00000531741 ARHGAP31Q2M1Z3 1444 aa22.15■■□□□ 1.14
VPS26B-206ENST00000531741 GGT6Q6P531 493 aa22.15■■□□□ 1.14
VPS26B-206ENST00000531741 PUS7Q96PZ0 661 aaKnown RBP22.15■■□□□ 1.14
VPS26B-206ENST00000531741 DIP2CQ9Y2E4 1556 aa22.15■■□□□ 1.14
VPS26B-206ENST00000531741 SIGLEC1Q9BZZ2 1709 aa22.14■■□□□ 1.13
VPS26B-206ENST00000531741 CFAP65Q6ZU64 1925 aaKnown RBP22.13■■□□□ 1.13
VPS26B-206ENST00000531741 IPO9Q96P70 1041 aaKnown RBP22.12■■□□□ 1.13
VPS26B-206ENST00000531741 CHGAP10645 457 aaKnown RBP22.11■■□□□ 1.13
VPS26B-206ENST00000531741 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.11■■□□□ 1.13
VPS26B-206ENST00000531741 NEXMIFQ5QGS0 1516 aa22.11■■□□□ 1.13
VPS26B-206ENST00000531741 GLI2P10070 1586 aa22.1■■□□□ 1.13
VPS26B-206ENST00000531741 RICTORQ6R327 1708 aa22.1■■□□□ 1.13
VPS26B-206ENST00000531741 NKTRP30414 1462 aaKnown RBP22.1■■□□□ 1.13
VPS26B-206ENST00000531741 NSD3Q9BZ95 1437 aa22.09■■□□□ 1.13
VPS26B-206ENST00000531741 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
VPS26B-206ENST00000531741 ZFYVE9O95405 1425 aa22.08■■□□□ 1.13
VPS26B-206ENST00000531741 APAF1O14727 1248 aa22.08■■□□□ 1.12
VPS26B-206ENST00000531741 ARHGEF28Q8N1W1 1705 aaKnown RBP22.08■■□□□ 1.12
VPS26B-206ENST00000531741 SHPRHQ149N8 1683 aa22.07■■□□□ 1.12
VPS26B-206ENST00000531741 E9PSI1 815 aa22.07■■□□□ 1.12
VPS26B-206ENST00000531741 VGFO15240 615 aaPredicted RBP22.07■■□□□ 1.12
VPS26B-206ENST00000531741 C20orf194Q5TEA3 1177 aa22.07■■□□□ 1.12
VPS26B-206ENST00000531741 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
VPS26B-206ENST00000531741 BACH2Q9BYV9 841 aa22.07■■□□□ 1.12
VPS26B-206ENST00000531741 KDM2BQ8NHM5 1336 aa22.06■■□□□ 1.12
VPS26B-206ENST00000531741 PDE4AP27815 886 aa22.06■■□□□ 1.12
VPS26B-206ENST00000531741 RAPGEF3O95398 923 aa22.03■■□□□ 1.12
VPS26B-206ENST00000531741 CENPQQ7L2Z9 268 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms