RNA–Protein interactions for RNA: ENST00000531555.5

TRIM29-217, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-217ENST00000531555 SLIT1O75093 1534 aa11.98□□□□□ -0.49
TRIM29-217ENST00000531555 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
TRIM29-217ENST00000531555 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
TRIM29-217ENST00000531555 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
TRIM29-217ENST00000531555 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
TRIM29-217ENST00000531555 IQGAP1P46940 1657 aa11.97□□□□□ -0.49
TRIM29-217ENST00000531555 ZFYVE9O95405 1425 aa11.96□□□□□ -0.49
TRIM29-217ENST00000531555 TMEM2Q9UHN6 1383 aa11.96□□□□□ -0.49
TRIM29-217ENST00000531555 THEMISQ8N1K5 641 aaPredicted RBP11.96□□□□□ -0.49
TRIM29-217ENST00000531555 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
TRIM29-217ENST00000531555 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
TRIM29-217ENST00000531555 NCKAP5LQ9HCH0 1330 aa11.93□□□□□ -0.5
TRIM29-217ENST00000531555 LTKP29376 864 aa11.93□□□□□ -0.5
TRIM29-217ENST00000531555 NRXN3Q9Y4C0 1643 aa11.93□□□□□ -0.5
TRIM29-217ENST00000531555 TXNDC2Q86VQ3 553 aa11.92□□□□□ -0.5
TRIM29-217ENST00000531555 DCAF11Q8TEB1 546 aa11.92□□□□□ -0.5
TRIM29-217ENST00000531555 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
TRIM29-217ENST00000531555 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
TRIM29-217ENST00000531555 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
TRIM29-217ENST00000531555 MYOM2P54296 1465 aa11.91□□□□□ -0.5
TRIM29-217ENST00000531555 PPP1R15AO75807 674 aaPredicted RBP11.91□□□□□ -0.5
TRIM29-217ENST00000531555 SETD1AO15047 1707 aaKnown RBP11.91□□□□□ -0.5
TRIM29-217ENST00000531555 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
TRIM29-217ENST00000531555 ANKLE2Q86XL3 938 aa11.9□□□□□ -0.5
TRIM29-217ENST00000531555 EID1Q9Y6B2 187 aa11.9□□□□□ -0.5
TRIM29-217ENST00000531555 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
TRIM29-217ENST00000531555 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM29-217ENST00000531555 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
TRIM29-217ENST00000531555 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
TRIM29-217ENST00000531555 BCANQ96GW7 911 aa11.88□□□□□ -0.51
TRIM29-217ENST00000531555 LAMC1P11047 1609 aa11.88□□□□□ -0.51
TRIM29-217ENST00000531555 TRPM1Q7Z4N2 1603 aa11.88□□□□□ -0.51
TRIM29-217ENST00000531555 PLEKHG1Q9ULL1 1385 aa11.88□□□□□ -0.51
TRIM29-217ENST00000531555 MED14O60244 1454 aa11.88□□□□□ -0.51
TRIM29-217ENST00000531555 PIK3C2GO75747 1445 aa11.87□□□□□ -0.51
TRIM29-217ENST00000531555 ALKQ9UM73 1620 aa11.87□□□□□ -0.51
TRIM29-217ENST00000531555 KIAA1210Q9ULL0 1709 aa11.87□□□□□ -0.51
TRIM29-217ENST00000531555 VGFO15240 615 aaPredicted RBP11.87□□□□□ -0.51
TRIM29-217ENST00000531555 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
TRIM29-217ENST00000531555 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
TRIM29-217ENST00000531555 MSH5O43196 834 aa11.86□□□□□ -0.51
TRIM29-217ENST00000531555 ADAMTS13Q76LX8 1427 aa11.86□□□□□ -0.51
TRIM29-217ENST00000531555 DIP2AQ14689 1571 aa11.85□□□□□ -0.51
TRIM29-217ENST00000531555 CHD2O14647 1828 aaKnown RBP11.85□□□□□ -0.51
TRIM29-217ENST00000531555 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
TRIM29-217ENST00000531555 STRCP1A6NGW2 1772 aa11.84□□□□□ -0.51
TRIM29-217ENST00000531555 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
TRIM29-217ENST00000531555 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
TRIM29-217ENST00000531555 CFAP70Q5T0N1 1121 aa11.83□□□□□ -0.52
TRIM29-217ENST00000531555 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
TRIM29-217ENST00000531555 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
TRIM29-217ENST00000531555 METP08581 1390 aa11.8□□□□□ -0.52
TRIM29-217ENST00000531555 KNDC1Q76NI1 1749 aa11.8□□□□□ -0.52
TRIM29-217ENST00000531555 XRN1Q8IZH2 1706 aaKnown RBP11.8□□□□□ -0.52
TRIM29-217ENST00000531555 ADGRB1O14514 1584 aa11.8□□□□□ -0.52
TRIM29-217ENST00000531555 RALGAPBQ86X10 1494 aa11.8□□□□□ -0.52
TRIM29-217ENST00000531555 PTPRUQ92729 1446 aa11.79□□□□□ -0.52
TRIM29-217ENST00000531555 NBPF1Q3BBV0 1214 aa11.79□□□□□ -0.52
TRIM29-217ENST00000531555 TMEM132EQ6IEE7 984 aa11.79□□□□□ -0.52
TRIM29-217ENST00000531555 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
TRIM29-217ENST00000531555 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
TRIM29-217ENST00000531555 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
TRIM29-217ENST00000531555 TBX22Q9Y458 520 aa11.78□□□□□ -0.52
TRIM29-217ENST00000531555 DMRT2Q9Y5R5 561 aa11.77□□□□□ -0.53
TRIM29-217ENST00000531555 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.53
TRIM29-217ENST00000531555 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
TRIM29-217ENST00000531555 STK26Q9P289 416 aa11.76□□□□□ -0.53
TRIM29-217ENST00000531555 ZNF335Q9H4Z2 1342 aaPredicted RBP11.76□□□□□ -0.53
TRIM29-217ENST00000531555 YTHDC2Q9H6S0 1430 aaKnown RBP11.76□□□□□ -0.53
TRIM29-217ENST00000531555 CPS1P31327 1500 aa11.75□□□□□ -0.53
TRIM29-217ENST00000531555 AMOTL2Q9Y2J4 779 aa11.74□□□□□ -0.53
TRIM29-217ENST00000531555 LRPPRCP42704 1394 aaKnown RBP11.74□□□□□ -0.53
TRIM29-217ENST00000531555 PIK3R4Q99570 1358 aa11.74□□□□□ -0.53
TRIM29-217ENST00000531555 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
TRIM29-217ENST00000531555 KCNA6P17658 529 aa11.73□□□□□ -0.53
TRIM29-217ENST00000531555 ZEB1P37275 1124 aaPredicted RBP11.73□□□□□ -0.53
TRIM29-217ENST00000531555 PIAS4Q8N2W9 510 aaPredicted RBP11.73□□□□□ -0.53
TRIM29-217ENST00000531555 TRAK1Q9UPV9 953 aa11.73□□□□□ -0.53
TRIM29-217ENST00000531555 NALCNQ8IZF0 1738 aa11.72□□□□□ -0.53
TRIM29-217ENST00000531555 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
TRIM29-217ENST00000531555 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
TRIM29-217ENST00000531555 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
TRIM29-217ENST00000531555 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
TRIM29-217ENST00000531555 DLC1Q96QB1 1528 aa11.71□□□□□ -0.53
TRIM29-217ENST00000531555 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.53
TRIM29-217ENST00000531555 TECPR2O15040 1411 aa11.71□□□□□ -0.53
TRIM29-217ENST00000531555 ROBO2Q9HCK4 1378 aa11.71□□□□□ -0.53
TRIM29-217ENST00000531555 RBM33Q96EV2 1170 aaKnown RBP11.71□□□□□ -0.53
TRIM29-217ENST00000531555 PTCH1Q13635 1447 aa11.7□□□□□ -0.54
TRIM29-217ENST00000531555 ABCC11Q96J66 1382 aa11.7□□□□□ -0.54
TRIM29-217ENST00000531555 PLEKHH1Q9ULM0 1364 aa11.7□□□□□ -0.54
TRIM29-217ENST00000531555 SAFB2Q14151 953 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRIM29-217ENST00000531555 WAPLQ7Z5K2 1190 aa11.69□□□□□ -0.54
TRIM29-217ENST00000531555 LRRC7Q96NW7 1537 aa11.69□□□□□ -0.54
TRIM29-217ENST00000531555 USP47Q96K76 1375 aa11.68□□□□□ -0.54
TRIM29-217ENST00000531555 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
TRIM29-217ENST00000531555 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
TRIM29-217ENST00000531555 FAM135BQ49AJ0 1406 aa11.67□□□□□ -0.54
TRIM29-217ENST00000531555 POGKQ9P215 609 aa11.66□□□□□ -0.54
TRIM29-217ENST00000531555 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms