RNA–Protein interactions for RNA: ENST00000531531.1

MS4A6A-214, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-214ENST00000531531 FHOD3Q2V2M9 1422 aa9.61□□□□□ -0.87
MS4A6A-214ENST00000531531 KIF27Q86VH2 1401 aa9.61□□□□□ -0.87
MS4A6A-214ENST00000531531 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
MS4A6A-214ENST00000531531 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
MS4A6A-214ENST00000531531 POGZQ7Z3K3 1410 aa9.6□□□□□ -0.87
MS4A6A-214ENST00000531531 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
MS4A6A-214ENST00000531531 SETD1BQ9UPS6 1966 aaKnown RBP9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 NCOA1Q15788 1441 aa9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 UHRF1BP1Q6BDS2 1440 aa9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 AKNAQ7Z591 1439 aa9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 POTEB3A0JP26 581 aa9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 CEBPAP49715 358 aaPredicted RBP9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.87
MS4A6A-214ENST00000531531 ERBB3P21860 1342 aa9.58□□□□□ -0.88
MS4A6A-214ENST00000531531 EFCAB5A4FU69 1503 aa9.58□□□□□ -0.88
MS4A6A-214ENST00000531531 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
MS4A6A-214ENST00000531531 PCDHGA4Q9Y5G9 962 aa9.58□□□□□ -0.88
MS4A6A-214ENST00000531531 ATP10BO94823 1461 aa9.58□□□□□ -0.88
MS4A6A-214ENST00000531531 C3P01024 1663 aa9.58□□□□□ -0.88
MS4A6A-214ENST00000531531 UBAP1LF5GYI3 381 aa9.57□□□□□ -0.88
MS4A6A-214ENST00000531531 HSPA1LP34931 641 aa9.57□□□□□ -0.88
MS4A6A-214ENST00000531531 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
MS4A6A-214ENST00000531531 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
MS4A6A-214ENST00000531531 LARP6Q9BRS8 491 aaKnown RBP9.57□□□□□ -0.88
MS4A6A-214ENST00000531531 DENND4BO75064 1496 aaPredicted RBP9.57□□□□□ -0.88
MS4A6A-214ENST00000531531 HECW1Q76N89 1606 aa9.56□□□□□ -0.88
MS4A6A-214ENST00000531531 ALKQ9UM73 1620 aa9.56□□□□□ -0.88
MS4A6A-214ENST00000531531 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
MS4A6A-214ENST00000531531 MLECQ14165 292 aa9.55□□□□□ -0.88
MS4A6A-214ENST00000531531 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
MS4A6A-214ENST00000531531 ZNF335Q9H4Z2 1342 aaPredicted RBP9.55□□□□□ -0.88
MS4A6A-214ENST00000531531 CTTNBP2Q8WZ74 1663 aa9.55□□□□□ -0.88
MS4A6A-214ENST00000531531 NUDT7P0C024 238 aa9.54□□□□□ -0.88
MS4A6A-214ENST00000531531 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
MS4A6A-214ENST00000531531 DDX27Q96GQ7 796 aaKnown RBP9.53□□□□□ -0.88
MS4A6A-214ENST00000531531 RGS17Q9UGC6 210 aaPredicted RBP9.53□□□□□ -0.88
MS4A6A-214ENST00000531531 CAMSAP1Q5T5Y3 1602 aa9.52□□□□□ -0.89
MS4A6A-214ENST00000531531 MAGI2Q86UL8 1455 aa9.52□□□□□ -0.89
MS4A6A-214ENST00000531531 SETD1AO15047 1707 aaKnown RBP9.51□□□□□ -0.89
MS4A6A-214ENST00000531531 CFAP74Q9C0B2 1584 aa9.51□□□□□ -0.89
MS4A6A-214ENST00000531531 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
MS4A6A-214ENST00000531531 TBC1D12O60347 775 aa9.51□□□□□ -0.89
MS4A6A-214ENST00000531531 MFSD10Q14728 455 aa9.51□□□□□ -0.89
MS4A6A-214ENST00000531531 LHX6Q9UPM6 363 aa9.49□□□□□ -0.89
MS4A6A-214ENST00000531531 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
MS4A6A-214ENST00000531531 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
MS4A6A-214ENST00000531531 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
MS4A6A-214ENST00000531531 OXER1Q8TDS5 423 aa9.48□□□□□ -0.89
MS4A6A-214ENST00000531531 ATP10AO60312 1499 aa9.47□□□□□ -0.89
MS4A6A-214ENST00000531531 ZNF687Q8N1G0 1237 aa9.47□□□□□ -0.89
MS4A6A-214ENST00000531531 UPF1Q92900 1129 aaKnown RBP eCLIP9.47□□□□□ -0.89
MS4A6A-214ENST00000531531 GOLGA3Q08378 1498 aa9.47□□□□□ -0.89
MS4A6A-214ENST00000531531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.46□□□□□ -0.89
MS4A6A-214ENST00000531531 ZNF142P52746 1687 aaPredicted RBP9.46□□□□□ -0.89
MS4A6A-214ENST00000531531 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
MS4A6A-214ENST00000531531 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
MS4A6A-214ENST00000531531 TCOF1Q13428 1488 aaKnown RBP9.45□□□□□ -0.9
MS4A6A-214ENST00000531531 TRAPPC8Q9Y2L5 1435 aa9.44□□□□□ -0.9
MS4A6A-214ENST00000531531 RAPGEF6Q8TEU7 1601 aa9.44□□□□□ -0.9
MS4A6A-214ENST00000531531 REREQ9P2R6 1566 aa9.43□□□□□ -0.9
MS4A6A-214ENST00000531531 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
MS4A6A-214ENST00000531531 PLA2R1Q13018 1463 aa9.42□□□□□ -0.9
MS4A6A-214ENST00000531531 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
MS4A6A-214ENST00000531531 EMILIN3Q9NT22 766 aa9.42□□□□□ -0.9
MS4A6A-214ENST00000531531 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
MS4A6A-214ENST00000531531 ABCA6Q8N139 1617 aa9.42□□□□□ -0.9
MS4A6A-214ENST00000531531 MYO3AQ8NEV4 1616 aa9.42□□□□□ -0.9
MS4A6A-214ENST00000531531 NUP153P49790 1475 aaKnown RBP9.41□□□□□ -0.9
MS4A6A-214ENST00000531531 MAP3K9P80192 1104 aa9.41□□□□□ -0.9
MS4A6A-214ENST00000531531 KDM5CP41229 1560 aa9.41□□□□□ -0.9
MS4A6A-214ENST00000531531 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
MS4A6A-214ENST00000531531 POTEAQ6S8J7 498 aa9.4□□□□□ -0.9
MS4A6A-214ENST00000531531 SCAPERQ9BY12 1400 aa9.39□□□□□ -0.91
MS4A6A-214ENST00000531531 MROH2AA6NES4 1674 aa9.39□□□□□ -0.91
MS4A6A-214ENST00000531531 NEURL4Q96JN8 1562 aa9.39□□□□□ -0.91
MS4A6A-214ENST00000531531 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
MS4A6A-214ENST00000531531 ANO8Q9HCE9 1232 aaPredicted RBP9.39□□□□□ -0.91
MS4A6A-214ENST00000531531 CPS1P31327 1500 aa9.39□□□□□ -0.91
MS4A6A-214ENST00000531531 AGLP35573 1532 aa9.39□□□□□ -0.91
MS4A6A-214ENST00000531531 SAMD9Q5K651 1589 aa9.38□□□□□ -0.91
MS4A6A-214ENST00000531531 EVI5O60447 810 aa9.38□□□□□ -0.91
MS4A6A-214ENST00000531531 CEP170BQ9Y4F5 1589 aaPredicted RBP9.37□□□□□ -0.91
MS4A6A-214ENST00000531531 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
MS4A6A-214ENST00000531531 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
MS4A6A-214ENST00000531531 POLR1AO95602 1720 aaPredicted RBP9.36□□□□□ -0.91
MS4A6A-214ENST00000531531 WDR70Q9NW82 654 aa9.36□□□□□ -0.91
MS4A6A-214ENST00000531531 STRCP1A6NGW2 1772 aa9.36□□□□□ -0.91
MS4A6A-214ENST00000531531 NPATQ14207 1427 aa9.36□□□□□ -0.91
MS4A6A-214ENST00000531531 TOM1O60784 492 aa9.35□□□□□ -0.91
MS4A6A-214ENST00000531531 POTEEQ6S8J3 1075 aa9.35□□□□□ -0.91
MS4A6A-214ENST00000531531 SHANK2Q9UPX8 1470 aa9.34□□□□□ -0.91
MS4A6A-214ENST00000531531 PBX2P40425 430 aa9.34□□□□□ -0.91
MS4A6A-214ENST00000531531 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
MS4A6A-214ENST00000531531 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
MS4A6A-214ENST00000531531 AXIN2Q9Y2T1 843 aa9.34□□□□□ -0.91
MS4A6A-214ENST00000531531 PLCH2O75038 1416 aa9.32□□□□□ -0.92
MS4A6A-214ENST00000531531 PTPRKQ15262 1439 aa9.32□□□□□ -0.92
MS4A6A-214ENST00000531531 RNF17Q9BXT8 1623 aaKnown RBP9.32□□□□□ -0.92
MS4A6A-214ENST00000531531 DPYSL4O14531 572 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms