RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 RIMS2Q9UQ26 1411 aa18.81■□□□□ 0.6
C11orf54-210ENST00000531516 KCNA6P17658 529 aa18.8■□□□□ 0.6
C11orf54-210ENST00000531516 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
C11orf54-210ENST00000531516 PLEKHG1Q9ULL1 1385 aa18.79■□□□□ 0.6
C11orf54-210ENST00000531516 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
C11orf54-210ENST00000531516 E9PCH4 1651 aa18.77■□□□□ 0.6
C11orf54-210ENST00000531516 LRRC7Q96NW7 1537 aa18.76■□□□□ 0.59
C11orf54-210ENST00000531516 PROSER2Q86WR7 435 aaPredicted RBP18.76■□□□□ 0.59
C11orf54-210ENST00000531516 TBX22Q9Y458 520 aa18.75■□□□□ 0.59
C11orf54-210ENST00000531516 ZFYVE9O95405 1425 aa18.74■□□□□ 0.59
C11orf54-210ENST00000531516 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
C11orf54-210ENST00000531516 TMEM131LA2VDJ0 1609 aa18.73■□□□□ 0.59
C11orf54-210ENST00000531516 NUTM2DQ5VT03 806 aaPredicted RBP18.72■□□□□ 0.59
C11orf54-210ENST00000531516 TMEM94Q12767 1356 aa18.69■□□□□ 0.58
C11orf54-210ENST00000531516 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
C11orf54-210ENST00000531516 C14orf37Q86TY3 774 aa18.69■□□□□ 0.58
C11orf54-210ENST00000531516 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
C11orf54-210ENST00000531516 HSPA1LP34931 641 aa18.68■□□□□ 0.58
C11orf54-210ENST00000531516 PIK3R4Q99570 1358 aa18.68■□□□□ 0.58
C11orf54-210ENST00000531516 MSH6P52701 1360 aa18.67■□□□□ 0.58
C11orf54-210ENST00000531516 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
C11orf54-210ENST00000531516 TRPM2O94759 1503 aa18.65■□□□□ 0.58
C11orf54-210ENST00000531516 VGFO15240 615 aaPredicted RBP18.65■□□□□ 0.58
C11orf54-210ENST00000531516 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
C11orf54-210ENST00000531516 DIP2AQ14689 1571 aa18.64■□□□□ 0.57
C11orf54-210ENST00000531516 MPHOSPH9Q99550 1183 aa18.63■□□□□ 0.57
C11orf54-210ENST00000531516 STRCP1A6NGW2 1772 aa18.63■□□□□ 0.57
C11orf54-210ENST00000531516 SETD5Q9C0A6 1442 aa18.62■□□□□ 0.57
C11orf54-210ENST00000531516 NCOA3Q9Y6Q9 1424 aa18.61■□□□□ 0.57
C11orf54-210ENST00000531516 RBM33Q96EV2 1170 aaKnown RBP18.61■□□□□ 0.57
C11orf54-210ENST00000531516 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
C11orf54-210ENST00000531516 NWD1Q149M9 1564 aa18.6■□□□□ 0.57
C11orf54-210ENST00000531516 CCDC144AA2RUR9 1427 aa18.6■□□□□ 0.57
C11orf54-210ENST00000531516 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
C11orf54-210ENST00000531516 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
C11orf54-210ENST00000531516 ATF3P18847 181 aa18.59■□□□□ 0.57
C11orf54-210ENST00000531516 CADPS2Q86UW7 1296 aa18.58■□□□□ 0.56
C11orf54-210ENST00000531516 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
C11orf54-210ENST00000531516 FOXD1Q16676 465 aa18.57■□□□□ 0.56
C11orf54-210ENST00000531516 C19orf44Q9H6X5 657 aa18.57■□□□□ 0.56
C11orf54-210ENST00000531516 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
C11orf54-210ENST00000531516 SLAIN2Q9P270 581 aa18.56■□□□□ 0.56
C11orf54-210ENST00000531516 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
C11orf54-210ENST00000531516 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
C11orf54-210ENST00000531516 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
C11orf54-210ENST00000531516 KIF1BO60333 1816 aa18.53■□□□□ 0.56
C11orf54-210ENST00000531516 RAB3GAP2Q9H2M9 1393 aa18.52■□□□□ 0.55
C11orf54-210ENST00000531516 NEXMIFQ5QGS0 1516 aa18.51■□□□□ 0.55
C11orf54-210ENST00000531516 ALKQ9UM73 1620 aa18.51■□□□□ 0.55
C11orf54-210ENST00000531516 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
C11orf54-210ENST00000531516 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
C11orf54-210ENST00000531516 HRCP23327 699 aa18.49■□□□□ 0.55
C11orf54-210ENST00000531516 METP08581 1390 aa18.49■□□□□ 0.55
C11orf54-210ENST00000531516 PTPRUQ92729 1446 aa18.47■□□□□ 0.55
C11orf54-210ENST00000531516 XIRP1Q702N8 1843 aaKnown RBP18.46■□□□□ 0.55
C11orf54-210ENST00000531516 DCCP43146 1447 aa18.45■□□□□ 0.54
C11orf54-210ENST00000531516 NRXN3Q9Y4C0 1643 aa18.42■□□□□ 0.54
C11orf54-210ENST00000531516 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
C11orf54-210ENST00000531516 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
C11orf54-210ENST00000531516 ROBO1Q9Y6N7 1651 aa18.41■□□□□ 0.54
C11orf54-210ENST00000531516 ADGRF5Q8IZF2 1346 aa18.4■□□□□ 0.54
C11orf54-210ENST00000531516 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
C11orf54-210ENST00000531516 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
C11orf54-210ENST00000531516 ILDR2Q71H61 639 aa18.39■□□□□ 0.53
C11orf54-210ENST00000531516 XRN1Q8IZH2 1706 aaKnown RBP18.39■□□□□ 0.53
C11orf54-210ENST00000531516 JCADQ9P266 1359 aa18.39■□□□□ 0.53
C11orf54-210ENST00000531516 STK26Q9P289 416 aa18.37■□□□□ 0.53
C11orf54-210ENST00000531516 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.37■□□□□ 0.53
C11orf54-210ENST00000531516 SOCS7O14512 581 aa18.36■□□□□ 0.53
C11orf54-210ENST00000531516 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
C11orf54-210ENST00000531516 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
C11orf54-210ENST00000531516 PPLO60437 1756 aa18.35■□□□□ 0.53
C11orf54-210ENST00000531516 ROBO2Q9HCK4 1378 aa18.34■□□□□ 0.53
C11orf54-210ENST00000531516 PRAG1Q86YV5 1406 aa18.33■□□□□ 0.53
C11orf54-210ENST00000531516 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.53
C11orf54-210ENST00000531516 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
C11orf54-210ENST00000531516 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
C11orf54-210ENST00000531516 DHX57Q6P158 1386 aaKnown RBP18.32■□□□□ 0.52
C11orf54-210ENST00000531516 MEX3CQ5U5Q3 659 aaKnown RBP18.32■□□□□ 0.52
C11orf54-210ENST00000531516 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
C11orf54-210ENST00000531516 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
C11orf54-210ENST00000531516 MST1RQ04912 1400 aa18.32■□□□□ 0.52
C11orf54-210ENST00000531516 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
C11orf54-210ENST00000531516 PHLPP1O60346 1717 aa18.31■□□□□ 0.52
C11orf54-210ENST00000531516 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
C11orf54-210ENST00000531516 MYOM2P54296 1465 aa18.29■□□□□ 0.52
C11orf54-210ENST00000531516 DCAF11Q8TEB1 546 aa18.29■□□□□ 0.52
C11orf54-210ENST00000531516 KDM2AQ9Y2K7 1162 aa18.29■□□□□ 0.52
C11orf54-210ENST00000531516 AHDC1Q5TGY3 1603 aaPredicted RBP18.28■□□□□ 0.52
C11orf54-210ENST00000531516 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
C11orf54-210ENST00000531516 ASXL1Q8IXJ9 1541 aa18.28■□□□□ 0.52
C11orf54-210ENST00000531516 TECPR2O15040 1411 aa18.27■□□□□ 0.52
C11orf54-210ENST00000531516 YTHDC2Q9H6S0 1430 aaKnown RBP18.27■□□□□ 0.52
C11orf54-210ENST00000531516 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.52
C11orf54-210ENST00000531516 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
C11orf54-210ENST00000531516 WAPLQ7Z5K2 1190 aa18.26■□□□□ 0.51
C11orf54-210ENST00000531516 POGKQ9P215 609 aa18.26■□□□□ 0.51
C11orf54-210ENST00000531516 ESCO1Q5FWF5 840 aa18.25■□□□□ 0.51
C11orf54-210ENST00000531516 SETD1AO15047 1707 aaKnown RBP18.24■□□□□ 0.51
C11orf54-210ENST00000531516 COL16A1Q07092 1604 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms