RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
SSH3-207ENST00000531495 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
SSH3-207ENST00000531495 TET3O43151 1660 aa20.54■□□□□ 0.88
SSH3-207ENST00000531495 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
SSH3-207ENST00000531495 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
SSH3-207ENST00000531495 CROCC2H7BZ55 1655 aa20.53■□□□□ 0.88
SSH3-207ENST00000531495 JCADQ9P266 1359 aa20.52■□□□□ 0.88
SSH3-207ENST00000531495 XIRP1Q702N8 1843 aaKnown RBP20.52■□□□□ 0.88
SSH3-207ENST00000531495 PLEKHG1Q9ULL1 1385 aa20.5■□□□□ 0.87
SSH3-207ENST00000531495 ADGRB3O60242 1522 aa20.5■□□□□ 0.87
SSH3-207ENST00000531495 ANKRD50Q9ULJ7 1429 aa20.5■□□□□ 0.87
SSH3-207ENST00000531495 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
SSH3-207ENST00000531495 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
SSH3-207ENST00000531495 ATF3P18847 181 aa20.48■□□□□ 0.87
SSH3-207ENST00000531495 RIMS2Q9UQ26 1411 aa20.47■□□□□ 0.87
SSH3-207ENST00000531495 MEX3CQ5U5Q3 659 aaKnown RBP20.47■□□□□ 0.87
SSH3-207ENST00000531495 CADPS2Q86UW7 1296 aa20.47■□□□□ 0.87
SSH3-207ENST00000531495 NCOA3Q9Y6Q9 1424 aa20.46■□□□□ 0.87
SSH3-207ENST00000531495 C19orf44Q9H6X5 657 aa20.46■□□□□ 0.87
SSH3-207ENST00000531495 ADGRL2O95490 1459 aa20.45■□□□□ 0.86
SSH3-207ENST00000531495 ZNF772Q68DY9 489 aaPredicted RBP20.44■□□□□ 0.86
SSH3-207ENST00000531495 SPATA31A6Q5VVP1 1343 aa20.44■□□□□ 0.86
SSH3-207ENST00000531495 NWD1Q149M9 1564 aa20.43■□□□□ 0.86
SSH3-207ENST00000531495 ZFYVE9O95405 1425 aa20.43■□□□□ 0.86
SSH3-207ENST00000531495 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
SSH3-207ENST00000531495 PIK3R4Q99570 1358 aa20.4■□□□□ 0.86
SSH3-207ENST00000531495 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.85
SSH3-207ENST00000531495 PHLPP1O60346 1717 aa20.38■□□□□ 0.85
SSH3-207ENST00000531495 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
SSH3-207ENST00000531495 RXRBP28702 533 aa20.34■□□□□ 0.85
SSH3-207ENST00000531495 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
SSH3-207ENST00000531495 TMEM131LA2VDJ0 1609 aa20.33■□□□□ 0.84
SSH3-207ENST00000531495 NUP155O75694 1391 aa20.33■□□□□ 0.84
SSH3-207ENST00000531495 NUTM2BA6NNL0 878 aaPredicted RBP20.32■□□□□ 0.84
SSH3-207ENST00000531495 NUTM2EB1AL46 878 aaPredicted RBP20.32■□□□□ 0.84
SSH3-207ENST00000531495 NUTM2AQ8IVF1 878 aaPredicted RBP20.32■□□□□ 0.84
SSH3-207ENST00000531495 ADAMTS13Q76LX8 1427 aa20.32■□□□□ 0.84
SSH3-207ENST00000531495 BRINP3Q76B58 766 aa20.31■□□□□ 0.84
SSH3-207ENST00000531495 ROCK1Q13464 1354 aa20.31■□□□□ 0.84
SSH3-207ENST00000531495 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
SSH3-207ENST00000531495 UPF1Q92900 1129 aaKnown RBP eCLIP20.29■□□□□ 0.84
SSH3-207ENST00000531495 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
SSH3-207ENST00000531495 ITGAEP38570 1179 aa20.28■□□□□ 0.84
SSH3-207ENST00000531495 LRRC59Q96AG4 307 aaKnown RBP20.28■□□□□ 0.84
SSH3-207ENST00000531495 DIP2AQ14689 1571 aa20.28■□□□□ 0.84
SSH3-207ENST00000531495 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.83
SSH3-207ENST00000531495 TRPM2O94759 1503 aa20.25■□□□□ 0.83
SSH3-207ENST00000531495 MYO5BQ9ULV0 1848 aa20.25■□□□□ 0.83
SSH3-207ENST00000531495 LRP6O75581 1613 aa20.24■□□□□ 0.83
SSH3-207ENST00000531495 AHDC1Q5TGY3 1603 aaPredicted RBP20.24■□□□□ 0.83
SSH3-207ENST00000531495 UNC13BO14795 1591 aa20.23■□□□□ 0.83
SSH3-207ENST00000531495 DCCP43146 1447 aa20.23■□□□□ 0.83
SSH3-207ENST00000531495 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
SSH3-207ENST00000531495 AFF2P51816 1311 aa20.22■□□□□ 0.83
SSH3-207ENST00000531495 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
SSH3-207ENST00000531495 E9PCH4 1651 aa20.19■□□□□ 0.82
SSH3-207ENST00000531495 QTRT2Q9H974 415 aaKnown RBP20.19■□□□□ 0.82
SSH3-207ENST00000531495 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
SSH3-207ENST00000531495 C8orf37Q96NL8 207 aa20.18■□□□□ 0.82
SSH3-207ENST00000531495 SETD1AO15047 1707 aaKnown RBP20.18■□□□□ 0.82
SSH3-207ENST00000531495 IQGAP3Q86VI3 1631 aa20.17■□□□□ 0.82
SSH3-207ENST00000531495 RBM6P78332 1123 aaKnown RBP20.17■□□□□ 0.82
SSH3-207ENST00000531495 SHPRHQ149N8 1683 aa20.16■□□□□ 0.82
SSH3-207ENST00000531495 NGLY1Q96IV0 654 aa20.16■□□□□ 0.82
SSH3-207ENST00000531495 CDK12Q9NYV4 1490 aaPredicted RBP20.16■□□□□ 0.82
SSH3-207ENST00000531495 METP08581 1390 aa20.15■□□□□ 0.82
SSH3-207ENST00000531495 MST1RQ04912 1400 aa20.15■□□□□ 0.82
SSH3-207ENST00000531495 ASXL1Q8IXJ9 1541 aa20.14■□□□□ 0.81
SSH3-207ENST00000531495 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
SSH3-207ENST00000531495 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
SSH3-207ENST00000531495 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
SSH3-207ENST00000531495 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
SSH3-207ENST00000531495 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
SSH3-207ENST00000531495 FOXD1Q16676 465 aa20.09■□□□□ 0.81
SSH3-207ENST00000531495 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
SSH3-207ENST00000531495 PPARGC1BQ86YN6 1023 aaKnown RBP20.08■□□□□ 0.81
SSH3-207ENST00000531495 USP21Q9UK80 565 aa20.06■□□□□ 0.8
SSH3-207ENST00000531495 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
SSH3-207ENST00000531495 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
SSH3-207ENST00000531495 RPGRIP1LQ68CZ1 1315 aa20.04■□□□□ 0.8
SSH3-207ENST00000531495 ORAI2Q96SN7 254 aa20.04■□□□□ 0.8
SSH3-207ENST00000531495 C1orf167Q5SNV9 1468 aa20.04■□□□□ 0.8
SSH3-207ENST00000531495 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
SSH3-207ENST00000531495 SOS2Q07890 1332 aaPredicted RBP20.02■□□□□ 0.8
SSH3-207ENST00000531495 SPHKAPQ2M3C7 1700 aa20.01■□□□□ 0.79
SSH3-207ENST00000531495 NHSL1Q5SYE7 1610 aa20.01■□□□□ 0.79
SSH3-207ENST00000531495 RGS12O14924 1447 aa20.01■□□□□ 0.79
SSH3-207ENST00000531495 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
SSH3-207ENST00000531495 ESCO1Q5FWF5 840 aa19.99■□□□□ 0.79
SSH3-207ENST00000531495 FNBP4Q8N3X1 1017 aaPredicted RBP19.99■□□□□ 0.79
SSH3-207ENST00000531495 ROBO2Q9HCK4 1378 aa19.98■□□□□ 0.79
SSH3-207ENST00000531495 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
SSH3-207ENST00000531495 PTCH1Q13635 1447 aa19.98■□□□□ 0.79
SSH3-207ENST00000531495 NEXMIFQ5QGS0 1516 aa19.97■□□□□ 0.79
SSH3-207ENST00000531495 NPHP3Q7Z494 1330 aa19.97■□□□□ 0.79
SSH3-207ENST00000531495 HFM1A2PYH4 1435 aa19.96■□□□□ 0.79
SSH3-207ENST00000531495 ZRANB1Q9UGI0 708 aa19.96■□□□□ 0.79
SSH3-207ENST00000531495 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
SSH3-207ENST00000531495 CLTCL1P53675 1640 aa19.94■□□□□ 0.78
SSH3-207ENST00000531495 LRPPRCP42704 1394 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms