RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CADPS2Q86UW7 1296 aa11.48□□□□□ -0.57
TRIM53CP-201ENST00000531490 AFAP1Q8N556 730 aa11.48□□□□□ -0.57
TRIM53CP-201ENST00000531490 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
TRIM53CP-201ENST00000531490 MAGI2Q86UL8 1455 aa11.48□□□□□ -0.57
TRIM53CP-201ENST00000531490 EFCAB5A4FU69 1503 aa11.47□□□□□ -0.57
TRIM53CP-201ENST00000531490 FOXK1P85037 733 aa11.47□□□□□ -0.57
TRIM53CP-201ENST00000531490 ZNF710Q8N1W2 664 aa11.47□□□□□ -0.57
TRIM53CP-201ENST00000531490 ATP10AO60312 1499 aa11.47□□□□□ -0.57
TRIM53CP-201ENST00000531490 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
TRIM53CP-201ENST00000531490 PLCH2O75038 1416 aa11.47□□□□□ -0.57
TRIM53CP-201ENST00000531490 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
TRIM53CP-201ENST00000531490 DSG2Q14126 1118 aa11.46□□□□□ -0.57
TRIM53CP-201ENST00000531490 PDE4AP27815 886 aa11.45□□□□□ -0.58
TRIM53CP-201ENST00000531490 EFCAB2Q5VUJ9 269 aa11.45□□□□□ -0.58
TRIM53CP-201ENST00000531490 C9orf84Q5VXU9 1444 aa11.45□□□□□ -0.58
TRIM53CP-201ENST00000531490 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
TRIM53CP-201ENST00000531490 PLPP6Q8IY26 295 aa11.44□□□□□ -0.58
TRIM53CP-201ENST00000531490 MARVELD3Q96A59 401 aa11.44□□□□□ -0.58
TRIM53CP-201ENST00000531490 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
TRIM53CP-201ENST00000531490 UHRF1BP1Q6BDS2 1440 aa11.42□□□□□ -0.58
TRIM53CP-201ENST00000531490 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
TRIM53CP-201ENST00000531490 ZSWIM6Q9HCJ5 1215 aa11.42□□□□□ -0.58
TRIM53CP-201ENST00000531490 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
TRIM53CP-201ENST00000531490 FER1L4A9Z1Z3 1794 aa11.42□□□□□ -0.58
TRIM53CP-201ENST00000531490 GPR153Q6NV75 609 aa11.41□□□□□ -0.58
TRIM53CP-201ENST00000531490 LARP6Q9BRS8 491 aaKnown RBP11.41□□□□□ -0.58
TRIM53CP-201ENST00000531490 SLC34A2O95436 690 aa11.41□□□□□ -0.58
TRIM53CP-201ENST00000531490 PPP1R15BQ5SWA1 713 aa11.4□□□□□ -0.59
TRIM53CP-201ENST00000531490 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
TRIM53CP-201ENST00000531490 ARSIQ5FYB1 569 aa11.39□□□□□ -0.59
TRIM53CP-201ENST00000531490 PTPRTO14522 1441 aa11.38□□□□□ -0.59
TRIM53CP-201ENST00000531490 SPATA31D1Q6ZQQ2 1576 aa11.38□□□□□ -0.59
TRIM53CP-201ENST00000531490 EMP3P54852 163 aa11.38□□□□□ -0.59
TRIM53CP-201ENST00000531490 MFSD10Q14728 455 aa11.38□□□□□ -0.59
TRIM53CP-201ENST00000531490 PREX1Q8TCU6 1659 aa11.37□□□□□ -0.59
TRIM53CP-201ENST00000531490 KHSRPQ92945 711 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRIM53CP-201ENST00000531490 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
TRIM53CP-201ENST00000531490 LTBP4Q8N2S1 1624 aa11.36□□□□□ -0.59
TRIM53CP-201ENST00000531490 ESF1Q9H501 851 aaKnown RBP11.36□□□□□ -0.59
TRIM53CP-201ENST00000531490 PCDHGA4Q9Y5G9 962 aa11.36□□□□□ -0.59
TRIM53CP-201ENST00000531490 ZNF518AQ6AHZ1 1483 aa11.36□□□□□ -0.59
TRIM53CP-201ENST00000531490 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
TRIM53CP-201ENST00000531490 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
TRIM53CP-201ENST00000531490 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
TRIM53CP-201ENST00000531490 KIF14Q15058 1648 aa11.34□□□□□ -0.59
TRIM53CP-201ENST00000531490 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
TRIM53CP-201ENST00000531490 UBAP1LF5GYI3 381 aa11.34□□□□□ -0.59
TRIM53CP-201ENST00000531490 PTCD2Q8WV60 388 aaKnown RBP11.34□□□□□ -0.59
TRIM53CP-201ENST00000531490 CDK11AQ9UQ88 783 aaPredicted RBP11.34□□□□□ -0.59
TRIM53CP-201ENST00000531490 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
TRIM53CP-201ENST00000531490 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
TRIM53CP-201ENST00000531490 LOC105371045A0A1W2PR82 267 aa11.32□□□□□ -0.6
TRIM53CP-201ENST00000531490 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
TRIM53CP-201ENST00000531490 KDM5CP41229 1560 aa11.32□□□□□ -0.6
TRIM53CP-201ENST00000531490 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
TRIM53CP-201ENST00000531490 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
TRIM53CP-201ENST00000531490 ARHGAP35Q9NRY4 1499 aa11.31□□□□□ -0.6
TRIM53CP-201ENST00000531490 NUDT7P0C024 238 aa11.3□□□□□ -0.6
TRIM53CP-201ENST00000531490 HS3ST6Q96QI5 342 aa11.3□□□□□ -0.6
TRIM53CP-201ENST00000531490 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
TRIM53CP-201ENST00000531490 MLH3Q9UHC1 1453 aa11.3□□□□□ -0.6
TRIM53CP-201ENST00000531490 FMN1Q68DA7 1419 aa11.3□□□□□ -0.6
TRIM53CP-201ENST00000531490 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
TRIM53CP-201ENST00000531490 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
TRIM53CP-201ENST00000531490 ABCA6Q8N139 1617 aa11.29□□□□□ -0.6
TRIM53CP-201ENST00000531490 ZMYM3Q14202 1370 aa11.29□□□□□ -0.6
TRIM53CP-201ENST00000531490 ERBB3P21860 1342 aa11.29□□□□□ -0.6
TRIM53CP-201ENST00000531490 C3P01024 1663 aa11.29□□□□□ -0.6
TRIM53CP-201ENST00000531490 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRIM53CP-201ENST00000531490 ZNF777Q9ULD5 760 aaPredicted RBP11.28□□□□□ -0.6
TRIM53CP-201ENST00000531490 CAMSAP1Q5T5Y3 1602 aa11.28□□□□□ -0.6
TRIM53CP-201ENST00000531490 CLIP1P30622 1438 aa11.28□□□□□ -0.6
TRIM53CP-201ENST00000531490 AGLP35573 1532 aa11.27□□□□□ -0.6
TRIM53CP-201ENST00000531490 MYO5CQ9NQX4 1742 aa11.27□□□□□ -0.61
TRIM53CP-201ENST00000531490 REREQ9P2R6 1566 aa11.27□□□□□ -0.61
TRIM53CP-201ENST00000531490 CDAN1Q8IWY9 1227 aa11.27□□□□□ -0.61
TRIM53CP-201ENST00000531490 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
TRIM53CP-201ENST00000531490 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
TRIM53CP-201ENST00000531490 SETD1BQ9UPS6 1966 aaKnown RBP11.26□□□□□ -0.61
TRIM53CP-201ENST00000531490 TBC1D12O60347 775 aa11.26□□□□□ -0.61
TRIM53CP-201ENST00000531490 HSPA1LP34931 641 aa11.26□□□□□ -0.61
TRIM53CP-201ENST00000531490 HNRNPMP52272 730 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRIM53CP-201ENST00000531490 CNTLNQ9NXG0 1405 aa11.25□□□□□ -0.61
TRIM53CP-201ENST00000531490 PIP4K2BP78356 416 aa11.25□□□□□ -0.61
TRIM53CP-201ENST00000531490 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
TRIM53CP-201ENST00000531490 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
TRIM53CP-201ENST00000531490 ABCC1P33527 1531 aa11.24□□□□□ -0.61
TRIM53CP-201ENST00000531490 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
TRIM53CP-201ENST00000531490 GGT6Q6P531 493 aa11.24□□□□□ -0.61
TRIM53CP-201ENST00000531490 SPAG9O60271 1321 aaKnown RBP11.23□□□□□ -0.61
TRIM53CP-201ENST00000531490 NPATQ14207 1427 aa11.23□□□□□ -0.61
TRIM53CP-201ENST00000531490 CAMK2BQ13554 666 aa11.23□□□□□ -0.61
TRIM53CP-201ENST00000531490 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
TRIM53CP-201ENST00000531490 PTPRKQ15262 1439 aa11.21□□□□□ -0.62
TRIM53CP-201ENST00000531490 CDC42BPBQ9Y5S2 1711 aa11.21□□□□□ -0.62
TRIM53CP-201ENST00000531490 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
TRIM53CP-201ENST00000531490 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
TRIM53CP-201ENST00000531490 SAMD9LQ8IVG5 1584 aa11.19□□□□□ -0.62
TRIM53CP-201ENST00000531490 LRRIQ1Q96JM4 1722 aa11.19□□□□□ -0.62
TRIM53CP-201ENST00000531490 FBXO31Q5XUX0 539 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms