RNA–Protein interactions for RNA: ENST00000531318.1

NFRKB-208, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 4

Gene NFRKB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-208ENST00000531318 FAM135BQ49AJ0 1406 aa11.57□□□□□ -0.56
NFRKB-208ENST00000531318 GCC2Q8IWJ2 1684 aa11.56□□□□□ -0.56
NFRKB-208ENST00000531318 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
NFRKB-208ENST00000531318 KCNA6P17658 529 aa11.56□□□□□ -0.56
NFRKB-208ENST00000531318 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
NFRKB-208ENST00000531318 TET3O43151 1660 aa11.55□□□□□ -0.56
NFRKB-208ENST00000531318 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
NFRKB-208ENST00000531318 MSH6P52701 1360 aa11.54□□□□□ -0.56
NFRKB-208ENST00000531318 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
NFRKB-208ENST00000531318 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
NFRKB-208ENST00000531318 LMTK2Q8IWU2 1503 aa11.53□□□□□ -0.56
NFRKB-208ENST00000531318 NWD1Q149M9 1564 aa11.53□□□□□ -0.56
NFRKB-208ENST00000531318 NKTRP30414 1462 aaKnown RBP11.52□□□□□ -0.56
NFRKB-208ENST00000531318 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
NFRKB-208ENST00000531318 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
NFRKB-208ENST00000531318 NOS1P29475 1434 aa11.51□□□□□ -0.57
NFRKB-208ENST00000531318 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
NFRKB-208ENST00000531318 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
NFRKB-208ENST00000531318 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
NFRKB-208ENST00000531318 NUTM2DQ5VT03 806 aaPredicted RBP11.49□□□□□ -0.57
NFRKB-208ENST00000531318 CNKSR2Q8WXI2 1034 aa11.49□□□□□ -0.57
NFRKB-208ENST00000531318 SLC52A1Q9NWF4 448 aa11.49□□□□□ -0.57
NFRKB-208ENST00000531318 RIMS2Q9UQ26 1411 aa11.49□□□□□ -0.57
NFRKB-208ENST00000531318 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
NFRKB-208ENST00000531318 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.49□□□□□ -0.57
NFRKB-208ENST00000531318 JCADQ9P266 1359 aa11.48□□□□□ -0.57
NFRKB-208ENST00000531318 TMEM131LA2VDJ0 1609 aa11.48□□□□□ -0.57
NFRKB-208ENST00000531318 PLEKHG1Q9ULL1 1385 aa11.46□□□□□ -0.57
NFRKB-208ENST00000531318 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
NFRKB-208ENST00000531318 E9PCH4 1651 aa11.46□□□□□ -0.58
NFRKB-208ENST00000531318 ADGRL2O95490 1459 aa11.45□□□□□ -0.58
NFRKB-208ENST00000531318 ZFYVE9O95405 1425 aa11.45□□□□□ -0.58
NFRKB-208ENST00000531318 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
NFRKB-208ENST00000531318 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
NFRKB-208ENST00000531318 RPRD2Q5VT52 1461 aaKnown RBP11.44□□□□□ -0.58
NFRKB-208ENST00000531318 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
NFRKB-208ENST00000531318 LRP6O75581 1613 aa11.44□□□□□ -0.58
NFRKB-208ENST00000531318 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
NFRKB-208ENST00000531318 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
NFRKB-208ENST00000531318 ATF3P18847 181 aa11.43□□□□□ -0.58
NFRKB-208ENST00000531318 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
NFRKB-208ENST00000531318 UNC13BO14795 1591 aa11.42□□□□□ -0.58
NFRKB-208ENST00000531318 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
NFRKB-208ENST00000531318 TBX22Q9Y458 520 aa11.42□□□□□ -0.58
NFRKB-208ENST00000531318 ZNF772Q68DY9 489 aaPredicted RBP11.41□□□□□ -0.58
NFRKB-208ENST00000531318 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
NFRKB-208ENST00000531318 AHDC1Q5TGY3 1603 aaPredicted RBP11.41□□□□□ -0.58
NFRKB-208ENST00000531318 DIP2AQ14689 1571 aa11.41□□□□□ -0.58
NFRKB-208ENST00000531318 SPATA31A6Q5VVP1 1343 aa11.4□□□□□ -0.58
NFRKB-208ENST00000531318 ADAMTS13Q76LX8 1427 aa11.4□□□□□ -0.58
NFRKB-208ENST00000531318 TRPM2O94759 1503 aa11.4□□□□□ -0.59
NFRKB-208ENST00000531318 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
NFRKB-208ENST00000531318 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
NFRKB-208ENST00000531318 AMOTL2Q9Y2J4 779 aa11.39□□□□□ -0.59
NFRKB-208ENST00000531318 IQGAP3Q86VI3 1631 aa11.38□□□□□ -0.59
NFRKB-208ENST00000531318 NCOA3Q9Y6Q9 1424 aa11.38□□□□□ -0.59
NFRKB-208ENST00000531318 ITGAEP38570 1179 aa11.38□□□□□ -0.59
NFRKB-208ENST00000531318 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
NFRKB-208ENST00000531318 RXRBP28702 533 aa11.37□□□□□ -0.59
NFRKB-208ENST00000531318 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
NFRKB-208ENST00000531318 BRINP3Q76B58 766 aa11.37□□□□□ -0.59
NFRKB-208ENST00000531318 PTPRUQ92729 1446 aa11.36□□□□□ -0.59
NFRKB-208ENST00000531318 ZNF326Q5BKZ1 582 aaKnown RBP11.36□□□□□ -0.59
NFRKB-208ENST00000531318 AFF2P51816 1311 aa11.35□□□□□ -0.59
NFRKB-208ENST00000531318 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
NFRKB-208ENST00000531318 NRXN3Q9Y4C0 1643 aa11.35□□□□□ -0.59
NFRKB-208ENST00000531318 XRN1Q8IZH2 1706 aaKnown RBP11.35□□□□□ -0.59
NFRKB-208ENST00000531318 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
NFRKB-208ENST00000531318 NUP155O75694 1391 aa11.35□□□□□ -0.59
NFRKB-208ENST00000531318 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
NFRKB-208ENST00000531318 ASXL1Q8IXJ9 1541 aa11.35□□□□□ -0.59
NFRKB-208ENST00000531318 DDX17Q92841 729 aaKnown RBP11.34□□□□□ -0.59
NFRKB-208ENST00000531318 KIF1BO60333 1816 aa11.34□□□□□ -0.59
NFRKB-208ENST00000531318 NALCNQ8IZF0 1738 aa11.34□□□□□ -0.59
NFRKB-208ENST00000531318 C8orf37Q96NL8 207 aa11.33□□□□□ -0.6
NFRKB-208ENST00000531318 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
NFRKB-208ENST00000531318 SRCAPQ6ZRS2 3230 aa11.31□□□□□ -0.6
NFRKB-208ENST00000531318 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
NFRKB-208ENST00000531318 MST1RQ04912 1400 aa11.31□□□□□ -0.6
NFRKB-208ENST00000531318 SETBP1Q9Y6X0 1596 aa11.3□□□□□ -0.6
NFRKB-208ENST00000531318 DCCP43146 1447 aa11.3□□□□□ -0.6
NFRKB-208ENST00000531318 ADAMTS2O95450 1211 aa11.3□□□□□ -0.6
NFRKB-208ENST00000531318 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
NFRKB-208ENST00000531318 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
NFRKB-208ENST00000531318 METP08581 1390 aa11.29□□□□□ -0.6
NFRKB-208ENST00000531318 ROCK1Q13464 1354 aa11.29□□□□□ -0.6
NFRKB-208ENST00000531318 SETD5Q9C0A6 1442 aa11.29□□□□□ -0.6
NFRKB-208ENST00000531318 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
NFRKB-208ENST00000531318 CLTCL1P53675 1640 aa11.28□□□□□ -0.6
NFRKB-208ENST00000531318 RGS12O14924 1447 aa11.28□□□□□ -0.6
NFRKB-208ENST00000531318 NGLY1Q96IV0 654 aa11.28□□□□□ -0.6
NFRKB-208ENST00000531318 PNPLA6Q8IY17 1366 aa11.28□□□□□ -0.6
NFRKB-208ENST00000531318 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.6
NFRKB-208ENST00000531318 RBM6P78332 1123 aaKnown RBP11.27□□□□□ -0.61
NFRKB-208ENST00000531318 NEXMIFQ5QGS0 1516 aa11.26□□□□□ -0.61
NFRKB-208ENST00000531318 EP400Q96L91 3159 aa11.25□□□□□ -0.61
NFRKB-208ENST00000531318 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
NFRKB-208ENST00000531318 C1orf167Q5SNV9 1468 aa11.24□□□□□ -0.61
NFRKB-208ENST00000531318 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
NFRKB-208ENST00000531318 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1746.7 ms