RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.84■■■■□ 3.01
TRAPPC4-210ENST00000531290 RIMS2Q9UQ26 1411 aa33.83■■■■□ 3.01
TRAPPC4-210ENST00000531290 ALKQ9UM73 1620 aa33.82■■■■□ 3
TRAPPC4-210ENST00000531290 TMEM94Q12767 1356 aa33.8■■■■□ 3
TRAPPC4-210ENST00000531290 PLEKHG1Q9ULL1 1385 aa33.8■■■■□ 3
TRAPPC4-210ENST00000531290 ZFYVE9O95405 1425 aa33.79■■■■□ 3
TRAPPC4-210ENST00000531290 GCC2Q8IWJ2 1684 aa33.77■■■■□ 3
TRAPPC4-210ENST00000531290 IQGAP3Q86VI3 1631 aa33.76■■■■□ 3
TRAPPC4-210ENST00000531290 RBM33Q96EV2 1170 aaKnown RBP33.76■■■□□ 2.99
TRAPPC4-210ENST00000531290 RRBP1Q9P2E9 1410 aaKnown RBP33.76■■■□□ 2.99
TRAPPC4-210ENST00000531290 SOCS7O14512 581 aa33.75■■■□□ 2.99
TRAPPC4-210ENST00000531290 NUTM2DQ5VT03 806 aaPredicted RBP33.74■■■□□ 2.99
TRAPPC4-210ENST00000531290 TBX22Q9Y458 520 aa33.74■■■□□ 2.99
TRAPPC4-210ENST00000531290 TMEM131LA2VDJ0 1609 aa33.72■■■□□ 2.99
TRAPPC4-210ENST00000531290 E9PCH4 1651 aa33.71■■■□□ 2.99
TRAPPC4-210ENST00000531290 NKTRP30414 1462 aaKnown RBP33.66■■■□□ 2.98
TRAPPC4-210ENST00000531290 FAM135BQ49AJ0 1406 aa33.64■■■□□ 2.98
TRAPPC4-210ENST00000531290 MSH6P52701 1360 aa33.63■■■□□ 2.97
TRAPPC4-210ENST00000531290 NAIPQ13075 1403 aa33.62■■■□□ 2.97
TRAPPC4-210ENST00000531290 ZNF326Q5BKZ1 582 aaKnown RBP33.62■■■□□ 2.97
TRAPPC4-210ENST00000531290 PHF23Q9BUL5 403 aaPredicted RBP33.62■■■□□ 2.97
TRAPPC4-210ENST00000531290 TRIM52Q96A61 297 aa33.6■■■□□ 2.97
TRAPPC4-210ENST00000531290 NWD1Q149M9 1564 aa33.6■■■□□ 2.97
TRAPPC4-210ENST00000531290 MED1Q15648 1581 aaPredicted RBP33.6■■■□□ 2.97
TRAPPC4-210ENST00000531290 ADAMTS13Q76LX8 1427 aa33.57■■■□□ 2.96
TRAPPC4-210ENST00000531290 C14orf37Q86TY3 774 aa33.57■■■□□ 2.96
TRAPPC4-210ENST00000531290 XIRP1Q702N8 1843 aaKnown RBP33.56■■■□□ 2.96
TRAPPC4-210ENST00000531290 SLAIN2Q9P270 581 aa33.56■■■□□ 2.96
TRAPPC4-210ENST00000531290 PIK3R4Q99570 1358 aa33.56■■■□□ 2.96
TRAPPC4-210ENST00000531290 MYO5BQ9ULV0 1848 aa33.56■■■□□ 2.96
TRAPPC4-210ENST00000531290 AMOTL2Q9Y2J4 779 aa33.51■■■□□ 2.95
TRAPPC4-210ENST00000531290 HFM1A2PYH4 1435 aa33.5■■■□□ 2.95
TRAPPC4-210ENST00000531290 NCOA3Q9Y6Q9 1424 aa33.5■■■□□ 2.95
TRAPPC4-210ENST00000531290 SLC4A1APQ9BWU0 796 aaKnown RBP33.48■■■□□ 2.95
TRAPPC4-210ENST00000531290 DIP2AQ14689 1571 aa33.47■■■□□ 2.95
TRAPPC4-210ENST00000531290 C19orf44Q9H6X5 657 aa33.46■■■□□ 2.95
TRAPPC4-210ENST00000531290 ATF3P18847 181 aa33.44■■■□□ 2.94
TRAPPC4-210ENST00000531290 CHD2O14647 1828 aaKnown RBP33.44■■■□□ 2.94
TRAPPC4-210ENST00000531290 CADPS2Q86UW7 1296 aa33.43■■■□□ 2.94
TRAPPC4-210ENST00000531290 SPHKAPQ2M3C7 1700 aa33.42■■■□□ 2.94
TRAPPC4-210ENST00000531290 TRPM2O94759 1503 aa33.42■■■□□ 2.94
TRAPPC4-210ENST00000531290 PTPRUQ92729 1446 aa33.39■■■□□ 2.94
TRAPPC4-210ENST00000531290 ROBO1Q9Y6N7 1651 aa33.38■■■□□ 2.93
TRAPPC4-210ENST00000531290 VGFO15240 615 aaPredicted RBP33.35■■■□□ 2.93
TRAPPC4-210ENST00000531290 METP08581 1390 aa33.34■■■□□ 2.93
TRAPPC4-210ENST00000531290 CLTCL1P53675 1640 aa33.33■■■□□ 2.93
TRAPPC4-210ENST00000531290 SETBP1Q9Y6X0 1596 aa33.33■■■□□ 2.93
TRAPPC4-210ENST00000531290 RPGRIP1LQ68CZ1 1315 aa33.29■■■□□ 2.92
TRAPPC4-210ENST00000531290 NEXMIFQ5QGS0 1516 aa33.28■■■□□ 2.92
TRAPPC4-210ENST00000531290 FOXD1Q16676 465 aa33.27■■■□□ 2.92
TRAPPC4-210ENST00000531290 RGS17Q9UGC6 210 aaPredicted RBP33.27■■■□□ 2.92
TRAPPC4-210ENST00000531290 JCADQ9P266 1359 aa33.26■■■□□ 2.92
TRAPPC4-210ENST00000531290 NRXN3Q9Y4C0 1643 aa33.24■■■□□ 2.91
TRAPPC4-210ENST00000531290 MPHOSPH9Q99550 1183 aa33.23■■■□□ 2.91
TRAPPC4-210ENST00000531290 DCCP43146 1447 aa33.2■■■□□ 2.91
TRAPPC4-210ENST00000531290 BRINP3Q76B58 766 aa33.2■■■□□ 2.91
TRAPPC4-210ENST00000531290 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.19■■■□□ 2.9
TRAPPC4-210ENST00000531290 KIF1BO60333 1816 aa33.16■■■□□ 2.9
TRAPPC4-210ENST00000531290 ACIN1Q9UKV3 1341 aaKnown RBP33.16■■■□□ 2.9
TRAPPC4-210ENST00000531290 PHLPP1O60346 1717 aa33.16■■■□□ 2.9
TRAPPC4-210ENST00000531290 XRN1Q8IZH2 1706 aaKnown RBP33.16■■■□□ 2.9
TRAPPC4-210ENST00000531290 CCDC144AA2RUR9 1427 aa33.14■■■□□ 2.9
TRAPPC4-210ENST00000531290 RGL3Q3MIN7 710 aa33.14■■■□□ 2.9
TRAPPC4-210ENST00000531290 SPATA31A6Q5VVP1 1343 aa33.12■■■□□ 2.89
TRAPPC4-210ENST00000531290 POTEAQ6S8J7 498 aa33.11■■■□□ 2.89
TRAPPC4-210ENST00000531290 ADGRL3Q9HAR2 1447 aa33.11■■■□□ 2.89
TRAPPC4-210ENST00000531290 MST1RQ04912 1400 aa33.09■■■□□ 2.89
TRAPPC4-210ENST00000531290 MEX3CQ5U5Q3 659 aaKnown RBP33.08■■■□□ 2.89
TRAPPC4-210ENST00000531290 COL16A1Q07092 1604 aaPredicted RBP33.07■■■□□ 2.88
TRAPPC4-210ENST00000531290 AHDC1Q5TGY3 1603 aaPredicted RBP33.06■■■□□ 2.88
TRAPPC4-210ENST00000531290 ROBO2Q9HCK4 1378 aa33.06■■■□□ 2.88
TRAPPC4-210ENST00000531290 SETD5Q9C0A6 1442 aa33.05■■■□□ 2.88
TRAPPC4-210ENST00000531290 ADGRF5Q8IZF2 1346 aa33.04■■■□□ 2.88
TRAPPC4-210ENST00000531290 PTCH1Q13635 1447 aa33.04■■■□□ 2.88
TRAPPC4-210ENST00000531290 ASXL1Q8IXJ9 1541 aa33.02■■■□□ 2.88
TRAPPC4-210ENST00000531290 ANKRD30BQ9BXX2 1392 aa33.01■■■□□ 2.88
TRAPPC4-210ENST00000531290 LRRC59Q96AG4 307 aaKnown RBP33.01■■■□□ 2.87
TRAPPC4-210ENST00000531290 SPATA31E1Q6ZUB1 1445 aa33■■■□□ 2.87
TRAPPC4-210ENST00000531290 NUTM2BA6NNL0 878 aaPredicted RBP32.98■■■□□ 2.87
TRAPPC4-210ENST00000531290 NUTM2EB1AL46 878 aaPredicted RBP32.98■■■□□ 2.87
TRAPPC4-210ENST00000531290 NUTM2AQ8IVF1 878 aaPredicted RBP32.98■■■□□ 2.87
TRAPPC4-210ENST00000531290 DDX17Q92841 729 aaKnown RBP32.97■■■□□ 2.87
TRAPPC4-210ENST00000531290 STK26Q9P289 416 aa32.96■■■□□ 2.87
TRAPPC4-210ENST00000531290 PRAG1Q86YV5 1406 aa32.95■■■□□ 2.87
TRAPPC4-210ENST00000531290 ZNF772Q68DY9 489 aaPredicted RBP32.95■■■□□ 2.87
TRAPPC4-210ENST00000531290 C1orf167Q5SNV9 1468 aa32.94■■■□□ 2.86
TRAPPC4-210ENST00000531290 LRP6O75581 1613 aa32.94■■■□□ 2.86
TRAPPC4-210ENST00000531290 PPLO60437 1756 aa32.92■■■□□ 2.86
TRAPPC4-210ENST00000531290 ORAI2Q96SN7 254 aa32.92■■■□□ 2.86
TRAPPC4-210ENST00000531290 RAB3GAP2Q9H2M9 1393 aa32.91■■■□□ 2.86
TRAPPC4-210ENST00000531290 TMEM132EQ6IEE7 984 aa32.9■■■□□ 2.86
TRAPPC4-210ENST00000531290 SETD1AO15047 1707 aaKnown RBP32.89■■■□□ 2.86
TRAPPC4-210ENST00000531290 NALCNQ8IZF0 1738 aa32.88■■■□□ 2.85
TRAPPC4-210ENST00000531290 LRPPRCP42704 1394 aaKnown RBP32.86■■■□□ 2.85
TRAPPC4-210ENST00000531290 SHPRHQ149N8 1683 aa32.86■■■□□ 2.85
TRAPPC4-210ENST00000531290 WAPLQ7Z5K2 1190 aa32.86■■■□□ 2.85
TRAPPC4-210ENST00000531290 ABCC11Q96J66 1382 aa32.84■■■□□ 2.85
TRAPPC4-210ENST00000531290 ESCO1Q5FWF5 840 aa32.83■■■□□ 2.85
TRAPPC4-210ENST00000531290 PIK3C2GO75747 1445 aa32.83■■■□□ 2.85
TRAPPC4-210ENST00000531290 PNPLA6Q8IY17 1366 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms