RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 STAG3Q9UJ98 1225 aa8.44□□□□□ -1.06
VPS11-204ENST00000530809 SPATA31A6Q5VVP1 1343 aa8.43□□□□□ -1.06
VPS11-204ENST00000530809 AHDC1Q5TGY3 1603 aaPredicted RBP8.43□□□□□ -1.06
VPS11-204ENST00000530809 GCC2Q8IWJ2 1684 aa8.43□□□□□ -1.06
VPS11-204ENST00000530809 KIF15Q9NS87 1388 aa8.42□□□□□ -1.06
VPS11-204ENST00000530809 NCOA3Q9Y6Q9 1424 aa8.42□□□□□ -1.06
VPS11-204ENST00000530809 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
VPS11-204ENST00000530809 CDK12Q9NYV4 1490 aaPredicted RBP8.41□□□□□ -1.06
VPS11-204ENST00000530809 MAPK8IP2Q13387 824 aaPredicted RBP8.41□□□□□ -1.06
VPS11-204ENST00000530809 ZNF772Q68DY9 489 aaPredicted RBP8.41□□□□□ -1.06
VPS11-204ENST00000530809 SLAIN2Q9P270 581 aa8.41□□□□□ -1.06
VPS11-204ENST00000530809 PTPN23Q9H3S7 1636 aa8.4□□□□□ -1.06
VPS11-204ENST00000530809 DIP2AQ14689 1571 aa8.4□□□□□ -1.06
VPS11-204ENST00000530809 UPF1Q92900 1129 aaKnown RBP eCLIP8.4□□□□□ -1.06
VPS11-204ENST00000530809 LRP6O75581 1613 aa8.4□□□□□ -1.07
VPS11-204ENST00000530809 RPRD2Q5VT52 1461 aaKnown RBP8.39□□□□□ -1.07
VPS11-204ENST00000530809 NOS1P29475 1434 aa8.39□□□□□ -1.07
VPS11-204ENST00000530809 VPS8Q8N3P4 1428 aa8.39□□□□□ -1.07
VPS11-204ENST00000530809 MEX3CQ5U5Q3 659 aaKnown RBP8.39□□□□□ -1.07
VPS11-204ENST00000530809 SLC26A8Q96RN1 970 aa8.39□□□□□ -1.07
VPS11-204ENST00000530809 PLEKHG1Q9ULL1 1385 aa8.38□□□□□ -1.07
VPS11-204ENST00000530809 IDI1Q13907 227 aa8.38□□□□□ -1.07
VPS11-204ENST00000530809 SLC52A1Q9NWF4 448 aa8.38□□□□□ -1.07
VPS11-204ENST00000530809 TMEM131LA2VDJ0 1609 aa8.38□□□□□ -1.07
VPS11-204ENST00000530809 ZFYVE9O95405 1425 aa8.37□□□□□ -1.07
VPS11-204ENST00000530809 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
VPS11-204ENST00000530809 ABCC5O15440 1437 aa8.37□□□□□ -1.07
VPS11-204ENST00000530809 DAPK1P53355 1430 aa8.37□□□□□ -1.07
VPS11-204ENST00000530809 NHSL1Q5SYE7 1610 aa8.36□□□□□ -1.07
VPS11-204ENST00000530809 CADPS2Q86UW7 1296 aa8.36□□□□□ -1.07
VPS11-204ENST00000530809 RBM33Q96EV2 1170 aaKnown RBP8.36□□□□□ -1.07
VPS11-204ENST00000530809 BCANQ96GW7 911 aa8.36□□□□□ -1.07
VPS11-204ENST00000530809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS11-204ENST00000530809 PIK3R4Q99570 1358 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 ANKRD30AQ9BXX3 1397 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 TRPM2O94759 1503 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 RXRBP28702 533 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 RRP7BPQ9NSQ0 103 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 DCCP43146 1447 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 RIMS2Q9UQ26 1411 aa8.35□□□□□ -1.07
VPS11-204ENST00000530809 PPP1R15AO75807 674 aaPredicted RBP8.34□□□□□ -1.07
VPS11-204ENST00000530809 TBX22Q9Y458 520 aa8.34□□□□□ -1.07
VPS11-204ENST00000530809 ADGRL2O95490 1459 aa8.33□□□□□ -1.08
VPS11-204ENST00000530809 ATF3P18847 181 aa8.33□□□□□ -1.08
VPS11-204ENST00000530809 C14orf37Q86TY3 774 aa8.33□□□□□ -1.08
VPS11-204ENST00000530809 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.33□□□□□ -1.08
VPS11-204ENST00000530809 C19orf44Q9H6X5 657 aa8.33□□□□□ -1.08
VPS11-204ENST00000530809 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
VPS11-204ENST00000530809 UNC13BO14795 1591 aa8.32□□□□□ -1.08
VPS11-204ENST00000530809 SETD5Q9C0A6 1442 aa8.32□□□□□ -1.08
VPS11-204ENST00000530809 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
VPS11-204ENST00000530809 E9PCH4 1651 aa8.32□□□□□ -1.08
VPS11-204ENST00000530809 ASXL1Q8IXJ9 1541 aa8.32□□□□□ -1.08
VPS11-204ENST00000530809 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
VPS11-204ENST00000530809 ADAMTS13Q76LX8 1427 aa8.31□□□□□ -1.08
VPS11-204ENST00000530809 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
VPS11-204ENST00000530809 AFF2P51816 1311 aa8.3□□□□□ -1.08
VPS11-204ENST00000530809 RGS12O14924 1447 aa8.3□□□□□ -1.08
VPS11-204ENST00000530809 LAMC1P11047 1609 aa8.29□□□□□ -1.08
VPS11-204ENST00000530809 RBM6P78332 1123 aaKnown RBP8.29□□□□□ -1.08
VPS11-204ENST00000530809 BRINP3Q76B58 766 aa8.29□□□□□ -1.08
VPS11-204ENST00000530809 NALCNQ8IZF0 1738 aa8.29□□□□□ -1.08
VPS11-204ENST00000530809 MARF1Q9Y4F3 1742 aaKnown RBP8.29□□□□□ -1.08
VPS11-204ENST00000530809 ANKRD50Q9ULJ7 1429 aa8.29□□□□□ -1.08
VPS11-204ENST00000530809 SETBP1Q9Y6X0 1596 aa8.28□□□□□ -1.08
VPS11-204ENST00000530809 ATAD2Q6PL18 1390 aa8.28□□□□□ -1.08
VPS11-204ENST00000530809 NUTM2BA6NNL0 878 aaPredicted RBP8.28□□□□□ -1.08
VPS11-204ENST00000530809 NUTM2EB1AL46 878 aaPredicted RBP8.28□□□□□ -1.08
VPS11-204ENST00000530809 NUTM2AQ8IVF1 878 aaPredicted RBP8.28□□□□□ -1.08
VPS11-204ENST00000530809 LRRC59Q96AG4 307 aaKnown RBP8.28□□□□□ -1.08
VPS11-204ENST00000530809 NRXN3Q9Y4C0 1643 aa8.28□□□□□ -1.08
VPS11-204ENST00000530809 MST1RQ04912 1400 aa8.28□□□□□ -1.08
VPS11-204ENST00000530809 SPHKAPQ2M3C7 1700 aa8.27□□□□□ -1.09
VPS11-204ENST00000530809 APLP2Q06481 763 aa8.27□□□□□ -1.09
VPS11-204ENST00000530809 NGLY1Q96IV0 654 aa8.27□□□□□ -1.09
VPS11-204ENST00000530809 PNPLA6Q8IY17 1366 aa8.26□□□□□ -1.09
VPS11-204ENST00000530809 NUTM2DQ5VT03 806 aaPredicted RBP8.26□□□□□ -1.09
VPS11-204ENST00000530809 QTRT2Q9H974 415 aaKnown RBP8.26□□□□□ -1.09
VPS11-204ENST00000530809 RNF216Q9NWF9 866 aaPredicted RBP8.26□□□□□ -1.09
VPS11-204ENST00000530809 CHIC2Q9UKJ5 165 aa8.26□□□□□ -1.09
VPS11-204ENST00000530809 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
VPS11-204ENST00000530809 COL22A1Q8NFW1 1626 aaPredicted RBP8.25□□□□□ -1.09
VPS11-204ENST00000530809 CHGAP10645 457 aaKnown RBP8.25□□□□□ -1.09
VPS11-204ENST00000530809 C8orf37Q96NL8 207 aa8.25□□□□□ -1.09
VPS11-204ENST00000530809 PTPRUQ92729 1446 aa8.25□□□□□ -1.09
VPS11-204ENST00000530809 ADGRL3Q9HAR2 1447 aa8.25□□□□□ -1.09
VPS11-204ENST00000530809 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.24□□□□□ -1.09
VPS11-204ENST00000530809 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
VPS11-204ENST00000530809 ZRANB1Q9UGI0 708 aa8.24□□□□□ -1.09
VPS11-204ENST00000530809 KIF1BO60333 1816 aa8.24□□□□□ -1.09
VPS11-204ENST00000530809 PTCH1Q13635 1447 aa8.23□□□□□ -1.09
VPS11-204ENST00000530809 CCDC125Q86Z20 511 aa8.23□□□□□ -1.09
VPS11-204ENST00000530809 TRPC5Q9UL62 973 aaPredicted RBP8.22□□□□□ -1.09
VPS11-204ENST00000530809 LRP5O75197 1615 aa8.21□□□□□ -1.09
VPS11-204ENST00000530809 ATRNO75882 1429 aa8.2□□□□□ -1.1
VPS11-204ENST00000530809 C1orf167Q5SNV9 1468 aa8.2□□□□□ -1.1
VPS11-204ENST00000530809 USP21Q9UK80 565 aa8.2□□□□□ -1.1
VPS11-204ENST00000530809 NEXMIFQ5QGS0 1516 aa8.19□□□□□ -1.1
VPS11-204ENST00000530809 ADAMTS2O95450 1211 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms