RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 NLRP13Q86W25 1043 aa17.01■□□□□ 0.31
CLINT1-210ENST00000530742 AFAP1Q8N556 730 aa17.01■□□□□ 0.31
CLINT1-210ENST00000530742 NEO1Q92859 1461 aa17■□□□□ 0.31
CLINT1-210ENST00000530742 BCANQ96GW7 911 aa16.99■□□□□ 0.31
CLINT1-210ENST00000530742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.314e-7■■■□□ 14.8
CLINT1-210ENST00000530742 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
CLINT1-210ENST00000530742 RICTORQ6R327 1708 aa16.98■□□□□ 0.31
CLINT1-210ENST00000530742 TMF1P82094 1093 aa16.98■□□□□ 0.31
CLINT1-210ENST00000530742 CAMSAP1Q5T5Y3 1602 aa16.97■□□□□ 0.31
CLINT1-210ENST00000530742 GLI2P10070 1586 aa16.96■□□□□ 0.31
CLINT1-210ENST00000530742 SLC24A1O60721 1099 aa16.96■□□□□ 0.31
CLINT1-210ENST00000530742 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
CLINT1-210ENST00000530742 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
CLINT1-210ENST00000530742 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
CLINT1-210ENST00000530742 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
CLINT1-210ENST00000530742 EIF3AQ14152 1382 aaKnown RBP16.94■□□□□ 0.3
CLINT1-210ENST00000530742 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
CLINT1-210ENST00000530742 ABCC3O15438 1527 aa16.94■□□□□ 0.3
CLINT1-210ENST00000530742 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
CLINT1-210ENST00000530742 PIK3C2GO75747 1445 aa16.93■□□□□ 0.3
CLINT1-210ENST00000530742 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
CLINT1-210ENST00000530742 ADGRB1O14514 1584 aa16.92■□□□□ 0.3
CLINT1-210ENST00000530742 UGGT1Q9NYU2 1555 aa16.92■□□□□ 0.3
CLINT1-210ENST00000530742 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
CLINT1-210ENST00000530742 ERVK-7P63135 1459 aa16.91■□□□□ 0.3
CLINT1-210ENST00000530742 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
CLINT1-210ENST00000530742 ARHGAP31Q2M1Z3 1444 aa16.91■□□□□ 0.3
CLINT1-210ENST00000530742 CD109Q6YHK3 1445 aa16.91■□□□□ 0.3
CLINT1-210ENST00000530742 NOS1P29475 1434 aa16.9■□□□□ 0.3
CLINT1-210ENST00000530742 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
CLINT1-210ENST00000530742 NPATQ14207 1427 aa16.88■□□□□ 0.29
CLINT1-210ENST00000530742 PANK3Q9H999 370 aa16.88■□□□□ 0.29
CLINT1-210ENST00000530742 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
CLINT1-210ENST00000530742 REREQ9P2R6 1566 aa16.86■□□□□ 0.29
CLINT1-210ENST00000530742 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
CLINT1-210ENST00000530742 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
CLINT1-210ENST00000530742 KIF3BO15066 747 aa16.85■□□□□ 0.29
CLINT1-210ENST00000530742 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
CLINT1-210ENST00000530742 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
CLINT1-210ENST00000530742 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
CLINT1-210ENST00000530742 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
CLINT1-210ENST00000530742 ZFYVE9O95405 1425 aa16.83■□□□□ 0.29
CLINT1-210ENST00000530742 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
CLINT1-210ENST00000530742 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
CLINT1-210ENST00000530742 PREX1Q8TCU6 1659 aa16.8■□□□□ 0.28
CLINT1-210ENST00000530742 SHPRHQ149N8 1683 aa16.79■□□□□ 0.28
CLINT1-210ENST00000530742 ZNF521Q96K83 1311 aa16.79■□□□□ 0.28
CLINT1-210ENST00000530742 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
CLINT1-210ENST00000530742 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
CLINT1-210ENST00000530742 PPP2R1AP30153 589 aa16.77■□□□□ 0.27
CLINT1-210ENST00000530742 TMEM131LA2VDJ0 1609 aa16.76■□□□□ 0.27
CLINT1-210ENST00000530742 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLINT1-210ENST00000530742 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
CLINT1-210ENST00000530742 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
CLINT1-210ENST00000530742 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
CLINT1-210ENST00000530742 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
CLINT1-210ENST00000530742 AGLP35573 1532 aa16.73■□□□□ 0.27
CLINT1-210ENST00000530742 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
CLINT1-210ENST00000530742 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
CLINT1-210ENST00000530742 NGEFQ8N5V2 710 aa16.73■□□□□ 0.27
CLINT1-210ENST00000530742 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
CLINT1-210ENST00000530742 CC2D1BQ5T0F9 858 aaKnown RBP16.72■□□□□ 0.27
CLINT1-210ENST00000530742 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
CLINT1-210ENST00000530742 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
CLINT1-210ENST00000530742 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
CLINT1-210ENST00000530742 TRMT2AQ8IZ69 625 aaKnown RBP16.71■□□□□ 0.27
CLINT1-210ENST00000530742 DIP2BQ9P265 1576 aa16.71■□□□□ 0.27
CLINT1-210ENST00000530742 TULP4Q9NRJ4 1543 aa16.69■□□□□ 0.26
CLINT1-210ENST00000530742 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
CLINT1-210ENST00000530742 CFAP65Q6ZU64 1925 aaKnown RBP16.68■□□□□ 0.26
CLINT1-210ENST00000530742 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
CLINT1-210ENST00000530742 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
CLINT1-210ENST00000530742 ADAMTS8Q9UP79 889 aa16.67■□□□□ 0.26
CLINT1-210ENST00000530742 CENPJQ9HC77 1338 aaPredicted RBP16.66■□□□□ 0.26
CLINT1-210ENST00000530742 IQSEC2Q5JU85 1478 aa16.65■□□□□ 0.26
CLINT1-210ENST00000530742 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
CLINT1-210ENST00000530742 NSD2O96028 1365 aa16.65■□□□□ 0.26
CLINT1-210ENST00000530742 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.26
CLINT1-210ENST00000530742 MSH5O43196 834 aa16.64■□□□□ 0.25
CLINT1-210ENST00000530742 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
CLINT1-210ENST00000530742 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
CLINT1-210ENST00000530742 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
CLINT1-210ENST00000530742 MED14O60244 1454 aa16.63■□□□□ 0.25
CLINT1-210ENST00000530742 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
CLINT1-210ENST00000530742 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
CLINT1-210ENST00000530742 CCDC136Q96JN2 1154 aa16.62■□□□□ 0.25
CLINT1-210ENST00000530742 DUSP27Q5VZP5 1158 aa16.62■□□□□ 0.25
CLINT1-210ENST00000530742 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
CLINT1-210ENST00000530742 PTPRMP28827 1452 aa16.61■□□□□ 0.25
CLINT1-210ENST00000530742 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
CLINT1-210ENST00000530742 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
CLINT1-210ENST00000530742 YEATS2Q9ULM3 1422 aa16.61■□□□□ 0.25
CLINT1-210ENST00000530742 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
CLINT1-210ENST00000530742 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
CLINT1-210ENST00000530742 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.25
CLINT1-210ENST00000530742 SLFN5Q08AF3 891 aa16.58■□□□□ 0.25
CLINT1-210ENST00000530742 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.25
CLINT1-210ENST00000530742 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLINT1-210ENST00000530742 NKTRP30414 1462 aaKnown RBP16.58■□□□□ 0.24
CLINT1-210ENST00000530742 MS4A1P11836 297 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms