RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 RPRD2Q5VT52 1461 aaKnown RBP7.24□□□□□ -1.25
SSBP3-213ENST00000530618 TOM1O60784 492 aa7.24□□□□□ -1.25
SSBP3-213ENST00000530618 PIP4K2BP78356 416 aa7.24□□□□□ -1.25
SSBP3-213ENST00000530618 RRP7BPQ9NSQ0 103 aa7.24□□□□□ -1.25
SSBP3-213ENST00000530618 NKTRP30414 1462 aaKnown RBP7.24□□□□□ -1.25
SSBP3-213ENST00000530618 ANKRD30AQ9BXX3 1397 aa7.23□□□□□ -1.25
SSBP3-213ENST00000530618 IDI1Q13907 227 aa7.23□□□□□ -1.25
SSBP3-213ENST00000530618 COL16A1Q07092 1604 aaPredicted RBP7.23□□□□□ -1.25
SSBP3-213ENST00000530618 FAM135BQ49AJ0 1406 aa7.22□□□□□ -1.25
SSBP3-213ENST00000530618 ANKRD50Q9ULJ7 1429 aa7.22□□□□□ -1.25
SSBP3-213ENST00000530618 TXNDC2Q86VQ3 553 aa7.22□□□□□ -1.25
SSBP3-213ENST00000530618 RGS17Q9UGC6 210 aaPredicted RBP7.22□□□□□ -1.25
SSBP3-213ENST00000530618 TMEM94Q12767 1356 aa7.21□□□□□ -1.25
SSBP3-213ENST00000530618 SPHKAPQ2M3C7 1700 aa7.21□□□□□ -1.25
SSBP3-213ENST00000530618 XRN1Q8IZH2 1706 aaKnown RBP7.21□□□□□ -1.25
SSBP3-213ENST00000530618 CHIC2Q9UKJ5 165 aa7.21□□□□□ -1.26
SSBP3-213ENST00000530618 SETD1AO15047 1707 aaKnown RBP7.21□□□□□ -1.26
SSBP3-213ENST00000530618 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.21□□□□□ -1.26
SSBP3-213ENST00000530618 ADAMTS13Q76LX8 1427 aa7.2□□□□□ -1.26
SSBP3-213ENST00000530618 FAM50AQ14320 339 aaKnown RBP7.2□□□□□ -1.26
SSBP3-213ENST00000530618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.2□□□□□ -1.26
SSBP3-213ENST00000530618 PHLPP1O60346 1717 aa7.2□□□□□ -1.26
SSBP3-213ENST00000530618 SCAF1Q9H7N4 1312 aaKnown RBP7.2□□□□□ -1.26
SSBP3-213ENST00000530618 DIP2AQ14689 1571 aa7.2□□□□□ -1.26
SSBP3-213ENST00000530618 KANK1Q14678 1352 aa7.2□□□□□ -1.26
SSBP3-213ENST00000530618 PLEKHG1Q9ULL1 1385 aa7.2□□□□□ -1.26
SSBP3-213ENST00000530618 PPARGC1BQ86YN6 1023 aaKnown RBP7.19□□□□□ -1.26
SSBP3-213ENST00000530618 RIMS2Q9UQ26 1411 aa7.18□□□□□ -1.26
SSBP3-213ENST00000530618 KCNA6P17658 529 aa7.18□□□□□ -1.26
SSBP3-213ENST00000530618 SLC26A8Q96RN1 970 aa7.18□□□□□ -1.26
SSBP3-213ENST00000530618 AHDC1Q5TGY3 1603 aaPredicted RBP7.18□□□□□ -1.26
SSBP3-213ENST00000530618 ACIN1Q9UKV3 1341 aaKnown RBP7.18□□□□□ -1.26
SSBP3-213ENST00000530618 SHPRHQ149N8 1683 aa7.18□□□□□ -1.26
SSBP3-213ENST00000530618 ROCK1Q13464 1354 aa7.18□□□□□ -1.26
SSBP3-213ENST00000530618 PTPRUQ92729 1446 aa7.18□□□□□ -1.26
SSBP3-213ENST00000530618 SETBP1Q9Y6X0 1596 aa7.17□□□□□ -1.26
SSBP3-213ENST00000530618 LRP6O75581 1613 aa7.17□□□□□ -1.26
SSBP3-213ENST00000530618 CLTCL1P53675 1640 aa7.17□□□□□ -1.26
SSBP3-213ENST00000530618 NHSL1Q5SYE7 1610 aa7.17□□□□□ -1.26
SSBP3-213ENST00000530618 RRBP1Q9P2E9 1410 aaKnown RBP7.17□□□□□ -1.26
SSBP3-213ENST00000530618 NALCNQ8IZF0 1738 aa7.16□□□□□ -1.26
SSBP3-213ENST00000530618 DCAF8L1A6NGE4 600 aa7.16□□□□□ -1.26
SSBP3-213ENST00000530618 TRIM26Q12899 539 aaPredicted RBP7.16□□□□□ -1.26
SSBP3-213ENST00000530618 RBM33Q96EV2 1170 aaKnown RBP7.16□□□□□ -1.26
SSBP3-213ENST00000530618 SLC52A1Q9NWF4 448 aa7.16□□□□□ -1.26
SSBP3-213ENST00000530618 EID1Q9Y6B2 187 aa7.16□□□□□ -1.26
SSBP3-213ENST00000530618 NEXMIFQ5QGS0 1516 aa7.16□□□□□ -1.26
SSBP3-213ENST00000530618 LAMC1P11047 1609 aa7.15□□□□□ -1.27
SSBP3-213ENST00000530618 KIF1BO60333 1816 aa7.14□□□□□ -1.27
SSBP3-213ENST00000530618 TRPM2O94759 1503 aa7.14□□□□□ -1.27
SSBP3-213ENST00000530618 POTEAQ6S8J7 498 aa7.14□□□□□ -1.27
SSBP3-213ENST00000530618 NCOA3Q9Y6Q9 1424 aa7.14□□□□□ -1.27
SSBP3-213ENST00000530618 PIK3R4Q99570 1358 aa7.13□□□□□ -1.27
SSBP3-213ENST00000530618 TBX22Q9Y458 520 aa7.13□□□□□ -1.27
SSBP3-213ENST00000530618 PPLO60437 1756 aa7.13□□□□□ -1.27
SSBP3-213ENST00000530618 IFT172Q9UG01 1749 aa7.13□□□□□ -1.27
SSBP3-213ENST00000530618 ITGAEP38570 1179 aa7.12□□□□□ -1.27
SSBP3-213ENST00000530618 PROSER2Q86WR7 435 aaPredicted RBP7.12□□□□□ -1.27
SSBP3-213ENST00000530618 SRCAPQ6ZRS2 3230 aa7.12□□□□□ -1.27
SSBP3-213ENST00000530618 EP400Q96L91 3159 aa7.12□□□□□ -1.27
SSBP3-213ENST00000530618 PRAG1Q86YV5 1406 aa7.11□□□□□ -1.27
SSBP3-213ENST00000530618 MSH6P52701 1360 aa7.11□□□□□ -1.27
SSBP3-213ENST00000530618 STAG3Q9UJ98 1225 aa7.11□□□□□ -1.27
SSBP3-213ENST00000530618 ASXL1Q8IXJ9 1541 aa7.11□□□□□ -1.27
SSBP3-213ENST00000530618 DCCP43146 1447 aa7.1□□□□□ -1.27
SSBP3-213ENST00000530618 MST1RQ04912 1400 aa7.1□□□□□ -1.27
SSBP3-213ENST00000530618 NAIPQ13075 1403 aa7.1□□□□□ -1.27
SSBP3-213ENST00000530618 JCADQ9P266 1359 aa7.1□□□□□ -1.27
SSBP3-213ENST00000530618 SLAIN2Q9P270 581 aa7.1□□□□□ -1.27
SSBP3-213ENST00000530618 NUP155O75694 1391 aa7.09□□□□□ -1.27
SSBP3-213ENST00000530618 METP08581 1390 aa7.09□□□□□ -1.27
SSBP3-213ENST00000530618 NUTM2DQ5VT03 806 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-213ENST00000530618 SETD5Q9C0A6 1442 aa7.08□□□□□ -1.28
SSBP3-213ENST00000530618 ADGRL3Q9HAR2 1447 aa7.08□□□□□ -1.28
SSBP3-213ENST00000530618 BRINP3Q76B58 766 aa7.07□□□□□ -1.28
SSBP3-213ENST00000530618 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.07□□□□□ -1.28
SSBP3-213ENST00000530618 COL22A1Q8NFW1 1626 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-213ENST00000530618 PTCH1Q13635 1447 aa7.07□□□□□ -1.28
SSBP3-213ENST00000530618 KNDC1Q76NI1 1749 aa7.07□□□□□ -1.28
SSBP3-213ENST00000530618 MARF1Q9Y4F3 1742 aaKnown RBP7.07□□□□□ -1.28
SSBP3-213ENST00000530618 AMOTL2Q9Y2J4 779 aa7.06□□□□□ -1.28
SSBP3-213ENST00000530618 HFM1A2PYH4 1435 aa7.06□□□□□ -1.28
SSBP3-213ENST00000530618 PPP1R15AO75807 674 aaPredicted RBP7.05□□□□□ -1.28
SSBP3-213ENST00000530618 C19orf44Q9H6X5 657 aa7.05□□□□□ -1.28
SSBP3-213ENST00000530618 CDK12Q9NYV4 1490 aaPredicted RBP7.04□□□□□ -1.28
SSBP3-213ENST00000530618 SPATA31A6Q5VVP1 1343 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 CDC42BPGQ6DT37 1551 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 CHGAP10645 457 aaKnown RBP7.04□□□□□ -1.28
SSBP3-213ENST00000530618 HRCP23327 699 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 CADPS2Q86UW7 1296 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 PCGF6Q9BYE7 350 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 PNPLA6Q8IY17 1366 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 ROBO2Q9HCK4 1378 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 C1orf167Q5SNV9 1468 aa7.04□□□□□ -1.28
SSBP3-213ENST00000530618 RGPD8O14715 1765 aaPredicted RBP7.03□□□□□ -1.28
SSBP3-213ENST00000530618 HDGFP51858 240 aaKnown RBP7.03□□□□□ -1.28
SSBP3-213ENST00000530618 FMN2Q9NZ56 1722 aa7.03□□□□□ -1.28
SSBP3-213ENST00000530618 SPATA31E1Q6ZUB1 1445 aa7.02□□□□□ -1.29
SSBP3-213ENST00000530618 ABCA3Q99758 1704 aa7.02□□□□□ -1.29
SSBP3-213ENST00000530618 DDX17Q92841 729 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms